TomoSeq data search

Data search

Results for MligTC455_15392

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_15392

264

5.51

Mlig455_013369

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.072

Mlig455_013369 {REF} {Length: 503} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_51444} {RNA815_25168}

Cumulative graph for MligTC455_15392

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.769	2.986	0.25586	0.90432
RegionR2	0.361	2.986	0.57183	0.93084
RegionR3	0.603	2.986	0.19953	0.73889
RegionR4	0.514	2.986	0.31566	0.63141
RegionR5	0.492	2.986	0.25287	0.57005
RegionR6	0.855	2.986	0.07979	0.52143
RegionR7	-0.278	2.986	0.67175	1.00000
RegionR8	-0.778	2.986	0.35213	0.98553

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.309	2.986	0.32724	1.00000
RegenerationR2	-0.199	2.986	0.66979	0.94524
RegenerationR3	0.22	2.986	0.65459	0.93089
RegenerationR4	-0.158	2.986	0.76209	0.97336
RegenerationR5	0.458	2.986	0.29914	0.72625
RegenerationR6	-0.216	2.986	0.68075	0.91463
RegenerationBL	-0.477	2.986	0.55679	0.91247
RegenerationTP	-2.39	2.986	0.05423	0.38027

Genes with expression patterns similar to MligTC455_15392

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_15392	264	5.51	Mlig455_013369	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.072		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_013369 {REF} {Length: 503} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_51444} {RNA815_25168}
2.	MligTC455_19440	231	4.81	Mlig455_060962	Neo: Int S/G2/M Age: -	HASPIN	1.696	-	-	0.746	0.950	-	-	Mlig455_060962 {REF} {Length: 3260} {TRANSSPLICED} {Pfam: Haspin like kinase domain [PF12330.10, score=192.8]; Protein kinase domain [PF00069.27, score=18.5]} {Human: ENSG00000177602, HASPIN, histone H3 associated protein kinase, [RH, Score=234, Expect=4e-66]} {Mouse: ENSMUSG00000050107, Haspin, histone H3 associated protein kinase, [RH, Score=244, Expect=4e-70]} {Dmel: FBgn0046706, Haspin, [Score=218, Expect=3e-62]} {Celegans: WBGene00007258, hasp-1, HASPin kinase related, [RH, Score=207, Expect=3e-56]} {Smed: dd_Smed_v6_12380_0_1, dd_Smed_v6_12380_0_1, [RH, Score=339, Expect=3e-107]} {RNA1509_10543, RNA1509_34207} {RNA1310_6931.1, RNA1509_10543, RNA1509_34207} {RNA1509_10543, RNA1509_34207, RNA815_2291}
3.	MligTC455_48811	378	7.88	Mlig455_023752	Neo: - Age: -	SYT3	1.687	-	-	0.737	0.950	-	-	Mlig455_023752 {REF} {Length: 2997} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=98.7]} {Human: ENSG00000213023, SYT3, synaptotagmin 3, [Score=112, Expect=5e-25]} {Mouse: ENSMUSG00000030731, Syt3, synaptotagmin III, [Score=109, Expect=2e-24]} {Dmel: FBgn0261089, Sytalpha, Synaptotagmin alpha, [Score=152, Expect=7e-39]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [Score=90.9, Expect=3e-19]} {Smed: dd_Smed_v6_12977_0_1, dd_Smed_v6_12977_0_1, [Score=68.6, Expect=9e-12]} {RNA1509_18500} {RNA1310_24981} {RNA815_6817}
4.	MligTC455_25497	257	5.35	Mlig455_021585	Neo: - Age: -		1.682	-	-	-	0.953	0.729	-	Mlig455_021585 {REF} {Length: 694} {NoTransDecoderORF} {RNA1509_24913, RNA1509_47081, RNA1509_55124, RNA1509_58789} {RNA1310_32307.1, RNA1509_24913, RNA1509_47081, RNA1509_55124, RNA1509_58789} {RNA1509_24913, RNA1509_47081, RNA1509_55124, RNA1509_58789, RNA815_996.1}
5.	MligTC455_53101	861	17.94	Mlig455_002632	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.796		0.983	-	-	-	0.983	-	-	Mlig455_002632 {REF} {Length: 2212} {TRANSSPLICED} {Pfam: Ragulator complex protein LAMTOR5 [PF16672.7, score=64.8]; Roadblock/LC7 domain [PF03259.19, score=24.2]} {RNA1509_23665, RNA1509_7057} {RNA1310_14581.1, RNA1509_23665} {RNA1509_23665, RNA815_27600.1}
6.	MligTC455_25110	2841	59.18	Mlig455_013097, Mlig455_013190	Neo: Germline Age: - Region-specific R5: 4.777 Region-enriched R5: 4.391/0.00000 Region-enriched R6: 2.134/0.02217		0.972	-	-	-	0.972	-	-	Mlig455_013097 {REF} {Length: 2671} {RNA1509_11937, RNA1509_17776, RNA1509_2109, RNA1509_33659} {RNA1310_50308, RNA1509_11937, RNA1509_17776, RNA1509_33659} {RNA1509_11937, RNA1509_17776, RNA1509_33659, RNA815_8058.1} Mlig455_013190 {REF} {Length: 2399} {RNA1509_2109} {RNA1310_50308, RNA1509_2109} {RNA1509_2109, RNA815_8058.1}
7.	MligTC455_36116	312	6.5	Mlig455_061645	Neo: Irradiation Age: Up-Down-Down		0.968	-	-	-	0.968	-	-	Mlig455_061645 {REF} {Length: 4713} {Pfam: Protein of unknown function (DUF2013) [PF09431.12, score=52.8]; SH3 domain [PF00018.30, score=38.1]; Variant SH3 domain [PF14604.8, score=37.3]; Variant SH3 domain [PF07653.19, score=20.7]} {Mouse: ENSMUSG00000031642, Sh3rf1, SH3 domain containing ring finger 1, [Score=49.7, Expect=9e-06]} {Dmel: FBgn0029997, CG2258, [RH, Score=117, Expect=3e-27]} {Smed: dd_Smed_v6_7468_0_1, dd_Smed_v6_7468_0_1, [Score=52.4, Expect=3e-07]} {RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002} {RNA1310_12007.1, RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002} {RNA1509_15850, RNA1509_34275, RNA1509_35090, RNA1509_44002, RNA815_4274}
8.	MligTC455_11365	53	1.1	Mlig455_009016	Neo: - Age: Down-Down-Up Region-enriched R5: 2.995/0.00709		0.962	-	-	-	0.962	-	-	Mlig455_009016 {REF} {Length: 2723} {TRANSSPLICED} {Pfam: Afadin- and alpha -actinin-Binding [PF11559.10, score=54.4]} {Mouse: ENSMUSG00000036825, Ssx2ip, synovial sarcoma, X 2 interacting protein, [RH, Score=91.7, Expect=2e-19]} {RNA1509_10737} {RNA1310_9399} {RNA815_26177}
9.	MligTC455_32636	284	5.92	Mlig455_001552, Mlig455_015911, Mlig455_048081, Mlig455_059668	Neo: - Age: Up-Down-Down		0.962	-	-	-	0.962	-	-	Mlig455_001552 {REF} {Length: 3111} {RNA1509_45425} {RNA1310_49840} {RNA815_47632} Mlig455_015911 {REF} {Length: 1112} {NoTransDecoderORF} {RNA1509_45425} {RNA1310_18706} {RNA815_131.1} Mlig455_048081 {REF} {Length: 801} {RNA1509_53375} {RNA1310_18706} {RNA815_131.1} Mlig455_059668 {REF} {Length: 1216} {NoTransDecoderORF} {RNA1509_45425} {RNA1310_18706} {RNA815_131.1}
10.	MligTC455_26869	1216	25.33	Mlig455_008292, Mlig455_040658, Mlig455_062060	Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.447 Region-enriched R5: 2.624/0.00000		0.957	-	-	-	0.957	-	-	Mlig455_008292 {REF} {Length: 2124} {TRANSSPLICED} {RNA1509_18957, RNA1509_37791} {RNA1310_20612.1, RNA1509_37791} {RNA1509_37791, RNA815_26913} Mlig455_040658 {REF} {Length: 2312} {TRANSSPLICED} {RNA1509_18957} {RNA1310_20612.1} {RNA815_26913} Mlig455_062060 {REF} {Length: 2680} {TRANSSPLICED} {RNA1509_18957, RNA1509_32011} {RNA1310_20612.1, RNA1509_32011} {RNA1509_32011, RNA815_26913}
11.	MligTC455_47517	474	9.87	Mlig455_039840	Neo: - Age: logFC(26M/2M)=0.285 Region-enriched R5: 1.029/0.01295	SLC8B1	0.955	-	-	-	0.955	-	-	Mlig455_039840 {REF} {Length: 3371} {TRANSSPLICED} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=175.4]} {Human: ENSG00000089060, SLC8B1, solute carrier family 8 member B1, [RH, Score=195, Expect=7e-54]} {Mouse: ENSMUSG00000032754, Slc8b1, solute carrier family 8 (sodium/lithium/calcium exchanger), member B1, [RH, Score=199, Expect=1e-55]} {Dmel: FBgn0033324, CG14744, [RH, Score=144, Expect=5e-36]} {Celegans: WBGene00003574, ncx-9, Na/Ca eXchangers, [RH, Score=219, Expect=3e-62]} {Smed: dd_Smed_v6_1009_1_1, dd_Smed_v6_1009_1_1, [Score=202, Expect=6e-59]} {RNA1509_16806} {RNA1310_10061, RNA1509_16806} {RNA1509_16806, RNA815_15337}
12.	MligTC455_10562	356	7.42	Mlig455_023642	Neo: - Age: -	RRAGC	0.954	-	-	-	0.954	-	-	Mlig455_023642 {REF} {Length: 3636} {Pfam: Gtr1/RagA G protein conserved region [PF04670.14, score=210.6]; ADP-ribosylation factor family [PF00025.23, score=31.8]; Signal recognition particle receptor beta subunit [PF09439.12, score=24.0]; Elongation factor Tu GTP binding domain [PF00009.29, score=19.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.2]} {Human: ENSG00000116954, RRAGC, Ras related GTP binding C, [RH, Score=409, Expect=2e-140]; ENSG00000025039, RRAGD, Ras related GTP binding D, [RH, Score=399, Expect=1e-136]} {Mouse: ENSMUSG00000028646, Rragc, Ras-related GTP binding C, [RH, Score=408, Expect=2e-140]; ENSMUSG00000028278, Rragd, Ras-related GTP binding D, [RH, Score=399, Expect=5e-137]} {Dmel: FBgn0033272, RagC-D, Ras-related GTP binding C/D, [RH, Score=400, Expect=2e-137]} {Celegans: WBGene00012497, ragc-1, RAs-related GTP binding protein C homolog, [RH, Score=283, Expect=1e-92]} {Smed: dd_Smed_v6_5653_0_1, dd_Smed_v6_5653_0_1, [RH, Score=419, Expect=2e-145]} {RNA1509_9291} {RNA1310_15858.1} {RNA815_8637}
13.	MligTC455_40666	254	5.28	Mlig455_064586, Mlig455_064587	Neo: - Age: Down-Up-Down	TRAPPC13	0.952	-	-	-	0.952	-	-	Mlig455_064586 {REF} {Length: 1204} {Pfam: Protein of unknown function (DUF974) [PF06159.15, score=227.4]; TRAPP trafficking subunit Trs65 [PF12735.9, score=19.9]} {Human: ENSG00000113597, TRAPPC13, trafficking protein particle complex 13, [RH, Score=338, Expect=1e-111]} {Mouse: ENSMUSG00000021711, Trappc13, trafficking protein particle complex 13, [RH, Score=333, Expect=4e-110]} {Dmel: FBgn0032204, CG4953, [RH, Score=244, Expect=3e-75]} {Celegans: WBGene00016964, C56C10.7, Probable trafficking protein particle complex subunit 13 homolog, [RH, Score=247, Expect=7e-77]} {Smed: dd_Smed_v6_7189_0_1, dd_Smed_v6_7189_0_1, [RH, Score=278, Expect=7e-89]} {RNA1509_52387} {RNA1310_62272} {RNA815_7017} Mlig455_064587 {REF} {Length: 1214} {Pfam: Protein of unknown function (DUF974) [PF06159.15, score=227.4]; TRAPP trafficking subunit Trs65 [PF12735.9, score=19.9]} {Human: ENSG00000113597, TRAPPC13, trafficking protein particle complex 13, [RH, Score=338, Expect=1e-111]} {Mouse: ENSMUSG00000021711, Trappc13, trafficking protein particle complex 13, [RH, Score=333, Expect=4e-110]} {Dmel: FBgn0032204, CG4953, [RH, Score=244, Expect=3e-75]} {Celegans: WBGene00016964, C56C10.7, Probable trafficking protein particle complex subunit 13 homolog, [RH, Score=247, Expect=7e-77]} {Smed: dd_Smed_v6_7189_0_1, dd_Smed_v6_7189_0_1, [RH, Score=278, Expect=7e-89]} {RNA1509_48982, RNA1509_52387} {RNA1310_62272, RNA1509_48982} {RNA1509_48982, RNA815_7017}

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