Data search
Results for MligTC455_15447
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15447 | 314 | 6.55 | Mlig455_052865 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 2.216/0.00200 |
ESRRG | Mlig455_052865 {REF} {Length: 3062} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=79.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=62.1]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=125, Expect=1e-31]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=120, Expect=6e-30]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=120, Expect=4e-30]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=122, Expect=9e-31]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=121, Expect=2e-30]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=119, Expect=2e-29]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=100, Expect=3e-23]} {Celegans: WBGene00003609, nhr-10, Nuclear hormone receptor family member nhr-10, [Score=90.5, Expect=5e-20]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=96.3, Expect=8e-22]} {RNA1509_22231, RNA1509_39413} {RNA1310_7459.2, RNA1509_22231, RNA1509_39413} {RNA1509_22231, RNA1509_39413, RNA815_5691.1} |
Cumulative graph for MligTC455_15447
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.316 | 2.942 | 0.90635 | 1.00000 | |
| RegionR2 | 2.251 | 2.942 | 0.00766 | 0.08506 | |
| RegionR3 | 0.627 | 2.942 | 0.40924 | 0.93508 | |
| RegionR4 | -0.221 | 2.942 | 0.87144 | 1.00000 | |
| RegionR5 | 2.216 | 2.942 | 0.00013 | 0.00200 | |
| RegionR6 | 2.031 | 2.942 | 0.00253 | 0.07103 | |
| RegionR7 | -0.528 | 2.942 | 0.94037 | 1.00000 | |
| RegionR8 | -6.061 | 2.942 | 0.02277 | 0.29382 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.042 | 2.942 | 0.59735 | 1.00000 | |
| RegenerationR2 | -0.472 | 2.942 | 0.40479 | 0.81717 | |
| RegenerationR3 | 0.703 | 2.942 | 0.30238 | 0.73357 | |
| RegenerationR4 | 0.05 | 2.942 | 0.94166 | 1.00000 | |
| RegenerationR5 | 0.192 | 2.942 | 0.69826 | 0.95091 | |
| RegenerationR6 | -0.898 | 2.942 | 0.17249 | 0.50443 | |
| RegenerationBL | 2.496 | 2.942 | 0.07398 | 0.31757 | |
| RegenerationTP | 4.248 | 2.942 | 0.00818 | 0.15252 |
Genes with expression patterns similar to MligTC455_15447
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15447 | 314 | 6.55 | Mlig455_052865 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 2.216/0.00200 |
ESRRG | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_052865 {REF} {Length: 3062} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=79.8]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=62.1]} {Human: ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=125, Expect=1e-31]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=120, Expect=6e-30]; ENSG00000119715, ESRRB, estrogen related receptor beta, [Score=120, Expect=4e-30]} {Mouse: ENSMUSG00000026610, Esrrg, estrogen-related receptor gamma, [Score=122, Expect=9e-31]; ENSMUSG00000024955, Esrra, estrogen related receptor, alpha, [Score=121, Expect=2e-30]; ENSMUSG00000021255, Esrrb, estrogen related receptor, beta, [Score=119, Expect=2e-29]} {Dmel: FBgn0035849, ERR, estrogen-related receptor, [Score=100, Expect=3e-23]} {Celegans: WBGene00003609, nhr-10, Nuclear hormone receptor family member nhr-10, [Score=90.5, Expect=5e-20]} {Smed: dd_Smed_v6_12210_0_1, dd_Smed_v6_12210_0_1, [Score=96.3, Expect=8e-22]} {RNA1509_22231, RNA1509_39413} {RNA1310_7459.2, RNA1509_22231, RNA1509_39413} {RNA1509_22231, RNA1509_39413, RNA815_5691.1} |
| 2. | MligTC455_44923 | 1476 | 30.74 | Mlig455_042352, Mlig455_047121 | Neo: - Age: Down-Up-Up |
WDR34 | 1.829 | - | 0.958 | - | - | - | 0.871 | Mlig455_042352 {REF} {Length: 2248} {TRANSSPLICED} {RNA1509_10795} {RNA1310_10379} {RNA815_12215.1} Mlig455_047121 {REF} {Length: 2263} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.1]} {Human: ENSG00000119333, WDR34, WD repeat domain 34, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000039715, Wdr34, WD repeat domain 34, [Score=119, Expect=3e-28]} {Smed: dd_Smed_v6_14428_0_1, dd_Smed_v6_14428_0_1, [RH, Score=169, Expect=1e-45]} {RNA1509_10795} {RNA1310_10379, RNA1509_10795} {RNA1509_10795, RNA815_12215.1} |
| 3. | MligTC455_45652 | 445 | 9.27 | Mlig455_067879 | Neo: - Age: - |
SCYL2 | 1.807 | - | 0.964 | - | - | - | 0.843 | Mlig455_067879 {REF} {Length: 4355} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=54.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=34.3]} {Human: ENSG00000136021, SCYL2, SCY1 like pseudokinase 2, [RH, Score=668, Expect=0.0]} {Mouse: ENSMUSG00000069539, Scyl2, SCY1-like 2 (S. cerevisiae), [RH, Score=672, Expect=0.0]} {Dmel: FBgn0039623, CG1951, [RH, Score=587, Expect=0.0]} {Celegans: WBGene00022635, ZC581.9, [RH, Score=179, Expect=3e-46]} {Smed: dd_Smed_v6_5612_0_1, dd_Smed_v6_5612_0_1, [RH, Score=667, Expect=0.0]} {RNA1509_11052, RNA1509_34278} {RNA1310_4168, RNA1509_34278} {RNA1509_34278, RNA815_3795} |
| 4. | MligTC455_33499 | 214 | 4.47 | Mlig455_012502, Mlig455_012590 | Neo: Irradiation Age: Down-Up-Up Region-specific R5: 5.580 Region-enriched R5: 4.822/0.00000 Regeneration-upregulated R4: 5.019 Regeneration-enriched R4: 5.019 |
PPP1R3C | 1.736 | 0.781 | 0.955 | - | - | - | - | Mlig455_012502 {REF} {Length: 2777} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=48.6]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=35.4]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=65.5, Expect=4e-11]; ENSG00000132825, PPP1R3D, protein phosphatase 1 regulatory subunit 3D, [Score=65.5, Expect=3e-11]} {Mouse: ENSMUSG00000049999, Ppp1r3d, protein phosphatase 1, regulatory subunit 3D, [Score=72.4, Expect=7e-14]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=77.8, Expect=5e-15]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=71.6, Expect=1e-13]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [Score=82.0, Expect=3e-17]} {RNA1509_41702} {RNA1310_12486} {RNA815_7332} Mlig455_012590 {REF} {Length: 2975} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=48.9]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=35.3]} {Human: ENSG00000119938, PPP1R3C, protein phosphatase 1 regulatory subunit 3C, [Score=66.6, Expect=2e-11]; ENSG00000132825, PPP1R3D, protein phosphatase 1 regulatory subunit 3D, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000049999, Ppp1r3d, protein phosphatase 1, regulatory subunit 3D, [Score=70.1, Expect=4e-13]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=77.8, Expect=4e-15]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=71.6, Expect=1e-13]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [Score=83.2, Expect=1e-17]} {RNA1509_34372, RNA1509_41702} {RNA1310_12486, RNA1509_34372} {RNA1509_34372, RNA815_7332} |
| 5. | MligTC455_44886 | 664 | 13.83 | Mlig455_009418 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.267/0.00151 |
1.709 | 0.749 | 0.960 | - | - | - | - | Mlig455_009418 {REF} {Length: 2273} {TRANSSPLICED} {RNA1509_19251} {RNA1310_6205.2, RNA1509_19251} {RNA1509_19251, RNA815_3904} | |
| 6. | MligTC455_41288 | 589 | 12.27 | Mlig455_059015 | Neo: - Age: Up-Down-Down |
UGGT1 | 0.967 | - | - | - | - | - | 0.967 | Mlig455_059015 {REF} {Length: 6372} {TRANSSPLICED} {Pfam: Glucosyltransferase 24 [PF18404.3, score=474.2]; Thioredoxin-like domain [PF18402.3, score=191.0]; UDP-glucose:Glycoprotein Glucosyltransferase [PF06427.13, score=109.8]; Thioredoxin-like domain [PF18403.3, score=104.3]; Thioredoxin-like domain [PF18400.3, score=102.6]; Thioredoxin-like domain [PF18401.3, score=101.7]} {Human: ENSG00000136731, UGGT1, UDP-glucose glycoprotein glucosyltransferase 1, [RH, Score=1111, Expect=0.0]; ENSG00000102595, UGGT2, UDP-glucose glycoprotein glucosyltransferase 2, [RH, Score=1071, Expect=0.0]} {Mouse: ENSMUSG00000037470, Uggt1, UDP-glucose glycoprotein glucosyltransferase 1, [RH, Score=1111, Expect=0.0]} {Dmel: FBgn0014075, Ugt, UDP-glucose-glycoprotein glucosyltransferase, [RH, Score=1014, Expect=0.0]} {Celegans: WBGene00018604, uggt-1, UDP-Glucose Glycoprotein glucosylTransferase, [RH, Score=1005, Expect=0.0]} {Smed: dd_Smed_v6_3427_0_1, dd_Smed_v6_3427_0_1, [RH, Score=1209, Expect=0.0]} {RNA1509_3396} {RNA1310_551, RNA1509_3396} {RNA1509_3396, RNA815_2274} |
| 7. | MligTC455_21046 | 472 | 9.84 | Mlig455_012022 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 1.897/0.00007 |
TMEM41B | 0.966 | - | 0.966 | - | - | - | - | Mlig455_012022 {REF} {Length: 3884} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF758) [PF05527.13, score=161.1]; SNARE associated Golgi protein [PF09335.13, score=60.4]; Tetratricopeptide repeat [PF00515.30, score=57.8]; Tetratricopeptide repeat [PF07719.19, score=51.7]; TPR repeat [PF13414.8, score=49.5]; Potential Monad-binding region of RPAP3 [PF13877.8, score=40.2]; Tetratricopeptide repeat [PF13181.8, score=37.5]; Tetratricopeptide repeat [PF13371.8, score=29.8]; Tetratricopeptide repeat [PF13432.8, score=24.4]; Tetratricopeptide repeat [PF13428.8, score=24.0]; Tetratricopeptide repeat [PF14559.8, score=22.1]; Tetratricopeptide repeat [PF13174.8, score=19.8]; Tetratricopeptide repeat [PF13431.8, score=19.0]} {Human: ENSG00000166471, TMEM41B, transmembrane protein 41B, [Score=248, Expect=1e-74]} {Mouse: ENSMUSG00000047554, Tmem41b, transmembrane protein 41B, [Score=256, Expect=9e-78]} {Dmel: FBgn0030850, stas, Stasimon, [Score=210, Expect=7e-61]} {Celegans: WBGene00006520, tag-175, Transmembrane protein 41 homolog, [Score=202, Expect=8e-59]} {Smed: dd_Smed_v6_9137_0_1, dd_Smed_v6_9137_0_1, [RH, Score=150, Expect=4e-39]} {RNA1509_27663} {RNA1310_19235} {RNA815_13394} |
| 8. | MligTC455_33648 | 520 | 10.82 | Mlig455_042676 | Neo: Irradiation Age: logFC(26M/2M)=0.186 |
0.966 | - | 0.966 | - | - | - | - | Mlig455_042676 {REF} {Length: 5561} {Dmel: FBgn0263993, CG43736, [RH, Score=83.6, Expect=5e-16]} {RNA1509_3896} {RNA1310_1327, RNA1509_3896} {RNA1509_3896, RNA815_2293.1} | |
| 9. | MligTC455_24069 | 860 | 17.93 | Mlig455_052618, Mlig455_052662 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.370/0.00048 |
MXD4 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_052618 {REF} {Length: 2762} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=32.9]} {Human: ENSG00000123933, MXD4, MAX dimerization protein 4, [RH, Score=56.2, Expect=9e-09]} {Mouse: ENSMUSG00000037235, Mxd4, Max dimerization protein 4, [RH, Score=59.7, Expect=5e-10]} {Dmel: FBgn0023215, Mnt, [RH, Score=59.3, Expect=3e-09]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=50.1, Expect=9e-07]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [RH, Score=56.6, Expect=5e-09]} {RNA1509_24438} {RNA1310_17333} {RNA815_9997.1} Mlig455_052662 {REF} {Length: 2776} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=32.9]} {Human: ENSG00000123933, MXD4, MAX dimerization protein 4, [RH, Score=56.6, Expect=8e-09]} {Mouse: ENSMUSG00000037235, Mxd4, Max dimerization protein 4, [RH, Score=59.7, Expect=4e-10]} {Dmel: FBgn0023215, Mnt, [RH, Score=59.3, Expect=2e-09]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=50.1, Expect=9e-07]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [RH, Score=56.6, Expect=4e-09]} {RNA1509_19157, RNA1509_24438} {RNA1310_17333, RNA1509_19157} {RNA1509_19157, RNA815_9997.1} |
| 10. | MligTC455_22882 | 665 | 13.86 | Mlig455_051921 | Neo: Irradiation Age: - |
SLC4A8 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_051921 {REF} {Length: 5989} {TRANSSPLICED} {Pfam: HCO3- transporter family [PF00955.23, score=716.3]; Band 3 cytoplasmic domain [PF07565.15, score=290.1]} {Human: ENSG00000050438, SLC4A8, solute carrier family 4 member 8, [RH, Score=964, Expect=0.0]; ENSG00000144290, SLC4A10, solute carrier family 4 member 10, [RH, Score=957, Expect=0.0]; ENSG00000033867, SLC4A7, solute carrier family 4 member 7, [RH, Score=954, Expect=0.0]} {Mouse: ENSMUSG00000023032, Slc4a8, solute carrier family 4 (anion exchanger), member 8, [RH, Score=971, Expect=0.0]; ENSMUSG00000021733, Slc4a7, solute carrier family 4, sodium bicarbonate cotransporter, member 7, [RH, Score=959, Expect=0.0]; ENSMUSG00000026904, Slc4a10, solute carrier family 4, sodium bicarbonate cotransporter-like, member 10, [RH, Score=955, Expect=0.0]} {Dmel: FBgn0259111, Ndae1, Na[+]-driven anion exchanger 1, [RH, Score=948, Expect=0.0]} {Celegans: WBGene00009920, abts-1, Anion exchange protein, [RH, Score=866, Expect=0.0]} {Smed: dd_Smed_v6_3003_0_2, dd_Smed_v6_3003_0_2, [RH, Score=1167, Expect=0.0]} {RNA1509_6255} {RNA1310_6265} {RNA815_527.1} |
| 11. | MligTC455_18889 | 166 | 3.46 | Mlig455_038272 | Neo: - Age: logFC(26M/2M)=0.371 Region-enriched R5: 2.530/0.00157 |
PCDH11X | 0.957 | - | 0.957 | - | - | - | - | Mlig455_038272 {REF} {Length: 4060} {Pfam: Cadherin domain [PF00028.19, score=243.6]; Cadherin-like [PF16184.7, score=34.0]; Cadherin-like [PF08266.14, score=27.2]} {Human: ENSG00000102290, PCDH11X, protocadherin 11 X-linked, [Score=269, Expect=6e-74]; ENSG00000184226, PCDH9, protocadherin 9, [Score=269, Expect=5e-74]; ENSG00000099715, PCDH11Y, protocadherin 11 Y-linked, [Score=265, Expect=1e-72]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=267, Expect=1e-73]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=266, Expect=4e-73]} {Dmel: FBgn0024836, stan, starry night, [Score=213, Expect=6e-56]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=165, Expect=6e-41]} {Smed: dd_Smed_v6_16566_0_2, dd_Smed_v6_16566_0_2, [Score=302, Expect=2e-87]} {RNA1509_44316} {RNA1310_36546, RNA1509_44316} {RNA1509_44316, RNA815_40009} |
| 12. | MligTC455_21153 | 1730 | 36.05 | Mlig455_033791, Mlig455_033841 | Neo: Int S/G2/M Age: - |
ACTL6A | 0.954 | - | - | 0.954 | - | - | - | Mlig455_033791 {REF} {Length: 2069} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=435.4]; MreB/Mbl protein [PF06723.15, score=18.4]} {Human: ENSG00000136518, ACTL6A, actin like 6A, [RH, Score=461, Expect=1e-160]; ENSG00000077080, ACTL6B, actin like 6B, [RH, Score=450, Expect=3e-156]} {Mouse: ENSMUSG00000027671, Actl6a, actin-like 6A, [RH, Score=460, Expect=3e-160]; ENSMUSG00000029712, Actl6b, actin-like 6B, [RH, Score=445, Expect=1e-154]} {Dmel: FBgn0025716, Bap55, Brahma associated protein 55kD, [RH, Score=449, Expect=2e-156]} {Celegans: WBGene00022774, swsn-6, SWI/SNF nucleosome remodeling complex component, [RH, Score=416, Expect=3e-143]} {Smed: dd_Smed_v6_2794_0_1, dd_Smed_v6_2794_0_1, [RH, Score=458, Expect=3e-160]} {RNA1509_8540} {RNA1310_1131} {RNA815_9002} Mlig455_033841 {REF} {Length: 2199} {TRANSSPLICED} {Pfam: Actin [PF00022.21, score=434.0]; MreB/Mbl protein [PF06723.15, score=18.5]} {Human: ENSG00000136518, ACTL6A, actin like 6A, [RH, Score=459, Expect=9e-160]; ENSG00000077080, ACTL6B, actin like 6B, [RH, Score=448, Expect=2e-155]} {Mouse: ENSMUSG00000027671, Actl6a, actin-like 6A, [RH, Score=458, Expect=1e-159]; ENSMUSG00000029712, Actl6b, actin-like 6B, [RH, Score=444, Expect=2e-154]} {Dmel: FBgn0025716, Bap55, Brahma associated protein 55kD, [RH, Score=448, Expect=6e-156]} {Celegans: WBGene00022774, swsn-6, SWI/SNF nucleosome remodeling complex component, [RH, Score=414, Expect=1e-142]} {Smed: dd_Smed_v6_2794_0_1, dd_Smed_v6_2794_0_1, [RH, Score=456, Expect=2e-159]} {RNA1509_10754, RNA1509_8540} {RNA1310_1131, RNA1509_10754, RNA1509_8540} {RNA1509_10754, RNA1509_8540, RNA815_9002} |
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