Data search
Results for MligTC455_15575
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15575 | 204 | 4.24 | Mlig455_005157, Mlig455_021619 | Neo: - Age: - Regeneration-upregulated R5: 2.404 Regeneration-enriched R5: 2.404 |
Mlig455_005157 {REF} {Length: 2994} {NoTransDecoderORF} {RNA1310_33825} {RNA815_48565} Mlig455_021619 {REF} {Length: 2997} {NoTransDecoderORF} {RNA1310_33825} {RNA815_48565} |
Cumulative graph for MligTC455_15575
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.655 | 2.718 | 0.71745 | 1.00000 | |
| RegionR2 | 0.515 | 2.718 | 0.58879 | 0.94273 | |
| RegionR3 | 0.318 | 2.718 | 0.67415 | 1.00000 | |
| RegionR4 | 0.011 | 2.718 | 0.96636 | 1.00000 | |
| RegionR5 | 0.095 | 2.718 | 0.87350 | 1.00000 | |
| RegionR6 | 0.728 | 2.718 | 0.33185 | 0.92000 | |
| RegionR7 | 0.27 | 2.718 | 0.80828 | 1.00000 | |
| RegionR8 | -1.281 | 2.718 | 0.45584 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.636 | 2.718 | 0.42831 | 1.00000 | |
| RegenerationR2 | 2.099 | 2.718 | 0.00088 | 0.04305 | |
| RegenerationR3 | 2.022 | 2.718 | 0.00383 | 0.11136 | |
| RegenerationR4 | 1.225 | 2.718 | 0.05077 | 0.36241 | |
| RegenerationR5 | 2.404 | 2.718 | 0.00005 | 0.00873 | Specific for R5: 2.404 |
| RegenerationR6 | 2.157 | 2.718 | 0.00102 | 0.03493 | |
| RegenerationBL | 1.289 | 2.718 | 0.20840 | 0.55085 | |
| RegenerationTP | 2.579 | 2.718 | 0.01415 | 0.20341 |
Genes with expression patterns similar to MligTC455_15575
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15575 | 204 | 4.24 | Mlig455_005157, Mlig455_021619 | Neo: - Age: - Regeneration-upregulated R5: 2.404 Regeneration-enriched R5: 2.404 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_005157 {REF} {Length: 2994} {NoTransDecoderORF} {RNA1310_33825} {RNA815_48565} Mlig455_021619 {REF} {Length: 2997} {NoTransDecoderORF} {RNA1310_33825} {RNA815_48565} |
|
| 2. | MligTC455_27967 | 43 | 0.9 | Mlig455_037154 | Neo: - Age: - |
SON | 0.97 | - | - | - | 0.970 | - | - | Mlig455_037154 {REF} {Length: 2192} {Pfam: Lipoprotein [PF01441.21, score=59.7]} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=79.7, Expect=2e-15]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=79.0, Expect=2e-15]} {RNA1509_35809} {RNA1310_10774} {RNA815_39659} |
| 3. | MligTC455_49131 | 870 | 18.12 | Mlig455_001232, Mlig455_034594 | Neo: - Age: - Region-enriched R7: 1.418/0.00487 |
SLC7A8 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_001232 {REF} {Length: 4239} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=211.5]; Amino acid permease [PF00324.23, score=108.0]} {Human: ENSG00000092068, SLC7A8, solute carrier family 7 member 8, [RH, Score=451, Expect=3e-154]} {Mouse: ENSMUSG00000031904, Slc7a6, solute carrier family 7 (cationic amino acid transporter, y+ system), member 6, [RH, Score=447, Expect=5e-153]; ENSMUSG00000022180, Slc7a8, solute carrier family 7 (cationic amino acid transporter, y+ system), member 8, [RH, Score=446, Expect=1e-152]} {Dmel: FBgn0028425, JhI-21, [Score=451, Expect=4e-155]} {Celegans: WBGene00000002, aat-1, Amino Acid Transporter, [Score=395, Expect=2e-133]} {Smed: dd_Smed_v6_2179_0_1, dd_Smed_v6_2179_0_1, [Score=400, Expect=2e-135]} {RNA1509_53014} {RNA1310_8531.1, RNA1509_53014} {RNA1509_53014, RNA815_4647} Mlig455_034594 {REF} {Length: 4318} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=210.6]; Amino acid permease [PF00324.23, score=108.1]} {Human: ENSG00000092068, SLC7A8, solute carrier family 7 member 8, [RH, Score=450, Expect=6e-154]} {Mouse: ENSMUSG00000022180, Slc7a8, solute carrier family 7 (cationic amino acid transporter, y+ system), member 8, [RH, Score=445, Expect=4e-152]; ENSMUSG00000031904, Slc7a6, solute carrier family 7 (cationic amino acid transporter, y+ system), member 6, [RH, Score=445, Expect=2e-152]} {Dmel: FBgn0028425, JhI-21, [Score=449, Expect=2e-154]} {Celegans: WBGene00000002, aat-1, Amino Acid Transporter, [Score=394, Expect=5e-133]} {Smed: dd_Smed_v6_2179_0_1, dd_Smed_v6_2179_0_1, [Score=401, Expect=7e-136]} {RNA1509_13664, RNA1509_15219, RNA1509_30916, RNA1509_45773, RNA1509_53014} {RNA1310_8531.1, RNA1509_13664, RNA1509_15219, RNA1509_30916, RNA1509_45773} {RNA1509_13664, RNA1509_15219, RNA1509_30916, RNA1509_45773, RNA815_4647} |
| 4. | MligTC455_19915 | 328 | 6.84 | Mlig455_018044 | Neo: Int S/G2/M Age: - |
KLHL13 | 0.956 | - | - | - | 0.956 | - | - | Mlig455_018044 {REF} {Length: 3003} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=106.5]; BTB/POZ domain [PF00651.33, score=96.6]; Kelch motif [PF13964.8, score=82.4]; Galactose oxidase, central domain [PF13415.8, score=60.5]; BTB And C-terminal Kelch [PF07707.17, score=42.6]; Galactose oxidase, central domain [PF13418.8, score=40.8]; Kelch motif [PF13854.8, score=39.6]; Kelch motif [PF07646.17, score=32.8]} {Human: ENSG00000003096, KLHL13, kelch like family member 13, [RH, Score=310, Expect=7e-96]; ENSG00000198642, KLHL9, kelch like family member 9, [RH, Score=308, Expect=1e-95]; ENSG00000167487, KLHL26, kelch like family member 26, [RH, Score=301, Expect=1e-92]} {Mouse: ENSMUSG00000070923, Klhl9, kelch-like 9, [RH, Score=311, Expect=9e-97]; ENSMUSG00000036782, Klhl13, kelch-like 13, [RH, Score=306, Expect=3e-95]} {Dmel: FBgn0037978, KLHL18, Kelch like family member 18, [Score=156, Expect=3e-40]} {Celegans: WBGene00020030, R12E2.1, [Score=167, Expect=4e-44]} {Smed: dd_Smed_v6_6164_0_1, dd_Smed_v6_6164_0_1, [Score=138, Expect=3e-34]} {RNA1509_15361} {RNA1310_4853.1, RNA1509_15361} {RNA1509_15361, RNA815_5001} |
| 5. | MligTC455_37909 | 128 | 2.68 | Mlig455_054841 | Neo: Int S/G2/M |
RAD54B | 0.95 | - | - | - | 0.950 | - | - | Mlig455_054841 {REF} {Length: 5846} {TRANSSPLICED} {Pfam: SNF2-related domain [PF00176.25, score=166.8]; Beta-ketoacyl synthase, N-terminal domain [PF00109.28, score=156.0]; Beta-ketoacyl synthase, C-terminal domain [PF02801.24, score=75.6]; Helicase conserved C-terminal domain [PF00271.33, score=45.4]; Type III restriction enzyme, res subunit [PF04851.17, score=36.0]} {Human: ENSG00000197275, RAD54B, RAD54 homolog B, [RH, Score=481, Expect=2e-150]; ENSG00000265817, FSBP, fibrinogen silencer binding protein, [RH, Score=457, Expect=9e-144]} {Mouse: ENSMUSG00000078773, Rad54b, RAD54 homolog B (S. cerevisiae), [RH, Score=478, Expect=1e-149]} {Dmel: FBgn0002989, okr, okra, [Score=358, Expect=4e-107]} {Celegans: WBGene00013792, Y116A8C.13, [RH, Score=373, Expect=5e-112]} {Smed: dd_Smed_v6_9943_0_1, dd_Smed_v6_9943_0_1, [RH, Score=451, Expect=2e-140]} {RNA1509_28654, RNA1509_51546} {RNA1310_14206, RNA1509_51546} {RNA1509_51546, RNA815_23602} |
Berezikov Lab - 2020-2021 © ERIBA