TomoSeq data search

Data search

Results for MligTC455_27967

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27967

43

0.90

Mlig455_037154

Neo: -

Age: -

SON

Mlig455_037154 {REF} {Length: 2192} {Pfam: Lipoprotein [PF01441.21, score=59.7]} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=79.7, Expect=2e-15]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=79.0, Expect=2e-15]} {RNA1509_35809} {RNA1310_10774} {RNA815_39659}

Cumulative graph for MligTC455_27967

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.776	1.021	1.00000	1.00000
RegionR2	1.185	1.021	1.00000	1.00000
RegionR3	0.529	1.021	1.00000	1.00000
RegionR4	-0.938	1.021	0.99986	1.00000
RegionR5	0.157	1.021	1.00000	1.00000
RegionR6	0.445	1.021	1.00000	1.00000
RegionR7	0.343	1.021	0.99996	1.00000
RegionR8	0.055	1.021	0.99997	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.079	1.021	0.99999	1.00000
RegenerationR2	4.215	1.021	0.00261	0.07721
RegenerationR3	3.798	1.021	0.04317	0.36332
RegenerationR4	2.721	1.021	0.08019	0.44892
RegenerationR5	4.132	1.021	0.00623	0.14395
RegenerationR6	5.044	1.021	0.00702	0.10244
RegenerationBL	4.88	1.021	0.01434	0.12494
RegenerationTP	5.127	1.021	0.04196	0.34019

Genes with expression patterns similar to MligTC455_27967

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27967	43	0.9	Mlig455_037154	Neo: - Age: -	SON	2	-	-	-	1.000	1.000	-	Mlig455_037154 {REF} {Length: 2192} {Pfam: Lipoprotein [PF01441.21, score=59.7]} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=79.7, Expect=2e-15]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=79.0, Expect=2e-15]} {RNA1509_35809} {RNA1310_10774} {RNA815_39659}
2.	MligTC455_27038	76	1.59	Mlig455_068920	Neo: - Age: -		1.679	-	-	-	0.727	0.952	-	Mlig455_068920 {REF} {Length: 7461} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=126.2]; Endonuclease-reverse transcriptase [PF14529.8, score=76.5]} {RNA1509_26043, RNA1509_32599, RNA1509_8795} {RNA1310_1659, RNA1509_26043, RNA1509_8795} {RNA1509_26043, RNA1509_8795, RNA815_252.1}
3.	MligTC455_27809	88	1.82	Mlig455_071155	Neo: - Age: -	RTL1	0.973	-	-	-	-	0.973	-	Mlig455_071155 {REF} {Length: 7128} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.8]; Integrase zinc binding domain [PF17921.3, score=65.6]; Integrase core domain [PF00665.28, score=61.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=105, Expect=2e-22]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=87.8, Expect=4e-17]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=303, Expect=5e-89]} {RNA1509_8253} {RNA1310_683.1} {RNA815_1542.1}
4.	MligTC455_15575	204	4.24	Mlig455_005157, Mlig455_021619	Neo: - Age: - Regeneration-upregulated R5: 2.404 Regeneration-enriched R5: 2.404		0.97	-	-	-	0.970	-	-	Mlig455_005157 {REF} {Length: 2994} {NoTransDecoderORF} {RNA1310_33825} {RNA815_48565} Mlig455_021619 {REF} {Length: 2997} {NoTransDecoderORF} {RNA1310_33825} {RNA815_48565}
5.	MligTC455_34868	1265	26.36	Mlig455_005678	Neo: - Age: Down-Up-Up	CALM2	0.96	-	-	-	-	0.960	-	Mlig455_005678 {REF} {Length: 1313} {Pfam: EF hand [PF00036.34, score=124.8]; EF-hand domain pair [PF13499.8, score=117.9]; EF hand [PF13202.8, score=101.9]; EF-hand domain [PF13405.8, score=99.9]; EF-hand domain pair [PF13833.8, score=77.4]; Dockerin type I domain [PF00404.20, score=45.3]; EF-hand domain [PF14658.8, score=41.8]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=41.4]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=30.8]; EF-hand domain [PF08976.13, score=24.8]; Family of unknown function (DUF5580) [PF17743.3, score=19.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=140, Expect=7e-43]; ENSG00000160014, CALM3, calmodulin 3, [Score=140, Expect=7e-43]; ENSG00000198668, CALM1, calmodulin 1, [Score=140, Expect=7e-43]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=140, Expect=5e-43]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=140, Expect=5e-43]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=140, Expect=5e-43]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=134, Expect=7e-41]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=137, Expect=6e-42]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=138, Expect=1e-42]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=138, Expect=1e-42]} {RNA1509_12165, RNA1509_40867} {RNA1310_49287, RNA1509_12165, RNA1509_40867} {RNA1509_12165, RNA1509_40867, RNA815_17221.2}
6.	MligTC455_30267	553	11.51	Mlig455_000281, Mlig455_000282, Mlig455_000432	Neo: - Age: - Region-enriched R5: 2.426/0.04566		0.958	-	-	-	-	0.958	-	Mlig455_000281 {REF} {Length: 158} {NoTransDecoderORF} {RNA1509_16349} {RNA1310_18082} {RNA815_43541} Mlig455_000282 {REF} {Length: 1776} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=23.0]} {RNA1509_16349} {RNA1310_2575} {RNA815_43541} Mlig455_000432 {REF} {Length: 3698} {RNA1509_16349} {RNA1310_2575} {RNA815_43541}
7.	MligTC455_12970	132	2.76	Mlig455_022445	Neo: - Age: logFC(26M/2M)=-1.642		0.957	-	-	-	-	0.957	-	Mlig455_022445 {REF} {Length: 1567} {Pfam: WSC domain [PF01822.21, score=52.5]; PAN domain [PF00024.28, score=21.7]} {RNA1509_43359} {RNA1310_32360, RNA1509_43359} {RNA1509_43359, RNA815_34556}
8.	MligTC455_50603	1962	40.88	Mlig455_004163	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.601	KLF1	0.955	-	-	-	-	0.955	-	Mlig455_004163 {REF} {Length: 1380} {Pfam: Zinc-finger double domain [PF13465.8, score=38.4]; Zinc finger, C2H2 type [PF00096.28, score=37.1]; C2H2-type zinc ribbon [PF15909.7, score=27.5]; C2H2-type zinc finger [PF13894.8, score=23.7]} {Human: ENSG00000105610, KLF1, Kruppel like factor 1, [Score=129, Expect=2e-35]} {Mouse: ENSMUSG00000005148, Klf5, Kruppel-like factor 5, [Score=125, Expect=2e-33]; ENSMUSG00000054191, Klf1, Kruppel-like factor 1 (erythroid), [Score=123, Expect=4e-33]; ENSMUSG00000035397, Klf16, Kruppel-like factor 16, [Score=120, Expect=3e-33]; ENSMUSG00000025959, Klf7, Kruppel-like factor 7 (ubiquitous), [Score=119, Expect=6e-32]; ENSMUSG00000055148, Klf2, Kruppel-like factor 2 (lung), [Score=119, Expect=8e-32]; ENSMUSG00000003032, Klf4, Kruppel-like factor 4 (gut), [Score=119, Expect=4e-31]} {Dmel: FBgn0261705, CG42741, [Score=120, Expect=4e-32]} {Celegans: WBGene00009998, klf-2, Kruppel-Like Factor (Zinc finger protein), [Score=119, Expect=2e-32]} {Smed: dd_Smed_v6_12264_0_1, dd_Smed_v6_12264_0_1, [Score=115, Expect=8e-32]} {RNA1509_15597} {RNA1310_30263} {RNA815_14612}
9.	MligTC455_28894	69	1.44	Mlig455_012699, Mlig455_033012	Neo: - Age: -	NPEPL1	0.954	-	-	-	-	0.954	-	Mlig455_012699 {REF} {Length: 3546} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=200.7]; DNA polymerase type B, organellar and viral [PF03175.15, score=34.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=5e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=2e-15]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=5e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.0, Expect=2e-15]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=352, Expect=4e-110]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=356, Expect=2e-111]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=411, Expect=1e-132]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168} Mlig455_033012 {REF} {Length: 2047} {TRANSSPLICED} {Pfam: Cytosol aminopeptidase family, catalytic domain [PF00883.23, score=203.2]} {Human: ENSG00000215440, NPEPL1, aminopeptidase like 1, [Score=84.0, Expect=1e-16]; ENSG00000002549, LAP3, leucine aminopeptidase 3, [Score=81.6, Expect=7e-16]} {Mouse: ENSMUSG00000039682, Lap3, leucine aminopeptidase 3, [Score=83.2, Expect=1e-16]; ENSMUSG00000039263, Npepl1, aminopeptidase-like 1, [Score=82.4, Expect=3e-16]} {Dmel: FBgn0000454, Dip-B, Dipeptidase B, [Score=354, Expect=4e-117]} {Celegans: WBGene00002250, lap-2, Putative aminopeptidase W07G4.4, [Score=350, Expect=1e-115]} {Smed: dd_Smed_v6_181_0_1, dd_Smed_v6_181_0_1, [Score=396, Expect=2e-133]} {RNA1509_51792} {RNA1310_13397} {RNA815_10168}
10.	MligTC455_14527	62	1.29	Mlig455_051309	Neo: - Age: -		0.953	-	-	-	0.953	-	-	Mlig455_051309 {REF} {Length: 3672} {Pfam: Zinc-binding domain [PF13695.8, score=76.4]} {Smed: dd_Smed_v6_4477_0_1, dd_Smed_v6_4477_0_1, [Score=75.5, Expect=2e-15]} {RNA1509_19264} {RNA1310_17898.1} {RNA815_11627}
11.	MligTC455_30276	75	1.56	Mlig455_000280	Neo: - Age: -	PACS2	0.953	-	-	-	-	0.953	-	Mlig455_000280 {REF} {Length: 4016} {Human: ENSG00000179364, PACS2, phosphofurin acidic cluster sorting protein 2, [Score=64.7, Expect=2e-10]; ENSG00000175115, PACS1, phosphofurin acidic cluster sorting protein 1, [Score=64.7, Expect=2e-10]} {Mouse: ENSMUSG00000021143, Pacs2, phosphofurin acidic cluster sorting protein 2, [Score=66.6, Expect=3e-11]; ENSMUSG00000024855, Pacs1, phosphofurin acidic cluster sorting protein 1, [Score=64.3, Expect=2e-10]} {Dmel: FBgn0020647, KrT95D, Krueppel target at 95D, [Score=50.4, Expect=2e-06]} {Celegans: WBGene00044077, tag-232, [Score=58.5, Expect=6e-09]} {Smed: dd_Smed_v6_5300_0_1, dd_Smed_v6_5300_0_1, [Score=57.4, Expect=1e-08]} {RNA1509_12647} {RNA1310_554.1} {RNA815_3500.1}
12.	MligTC455_51417	23	0.47	Mlig455_064878	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_064878 {REF} {Length: 1284} {NoTransDecoderORF} {RNA1310_109468}

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