M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_15648

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15648 198 4.13 Mlig455_030427, Mlig455_030477

Neo: -

Age: -

Mlig455_030427 {REF} {Length: 3286} {Smed: dd_Smed_v6_12269_0_1, dd_Smed_v6_12269_0_1, [Score=57.0, Expect=4e-09]} {RNA1509_50317} {RNA1310_26677} {RNA815_35533}

Mlig455_030477 {REF} {Length: 3267} {Smed: dd_Smed_v6_12269_0_1, dd_Smed_v6_12269_0_1, [Score=56.6, Expect=5e-09]} {RNA1509_50317} {RNA1310_26677, RNA1509_50317} {RNA1509_50317, RNA815_35533}

Cumulative graph for MligTC455_15648

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.844 2.445 0.05874 0.55871
RegionR2 0.59 2.445 0.42239 0.81314
RegionR3 -0.613 2.445 0.36006 0.89541
RegionR4 -0.308 2.445 0.72114 1.00000
RegionR5 -2.156 2.445 0.00310 0.02422
RegionR6 -0.133 2.445 0.84868 1.00000
RegionR7 1.023 2.445 0.16579 0.75089
RegionR8 -1.247 2.445 0.36331 0.99790

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -7.791 2.445 0.05937 0.72608
RegenerationR2 -0.602 2.445 0.32807 0.76588
RegenerationR3 -0.953 2.445 0.22115 0.65686
RegenerationR4 -1.095 2.445 0.20655 0.65334
RegenerationR5 -1.88 2.445 0.06410 0.39989
RegenerationR6 -0.627 2.445 0.41628 0.74871
RegenerationBL 0.838 2.445 0.33976 0.70648
RegenerationTP 0.263 2.445 0.80259 1.00000


Genes with expression patterns similar to MligTC455_15648

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15648 198 4.13 Mlig455_030427, Mlig455_030477

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_030427 {REF} {Length: 3286} {Smed: dd_Smed_v6_12269_0_1, dd_Smed_v6_12269_0_1, [Score=57.0, Expect=4e-09]} {RNA1509_50317} {RNA1310_26677} {RNA815_35533}

Mlig455_030477 {REF} {Length: 3267} {Smed: dd_Smed_v6_12269_0_1, dd_Smed_v6_12269_0_1, [Score=56.6, Expect=5e-09]} {RNA1509_50317} {RNA1310_26677, RNA1509_50317} {RNA1509_50317, RNA815_35533}
2. MligTC455_42784 842 17.55 Mlig455_004621, Mlig455_004630, Mlig455_004657

Neo: -

Age: -

Region-enriched R2: 2.895/0.00752

 2.402 0.700 - 0.752 0.950 - -

Mlig455_004621 {REF} {Length: 1246} {NoTransDecoderORF} {RNA1509_29447} {RNA1310_33893.1} {RNA815_16689.1}

Mlig455_004630 {REF} {Length: 2167} {NoTransDecoderORF} {RNA1509_29447} {RNA1310_33893.2} {RNA815_16689.1}

Mlig455_004657 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_29447} {RNA1310_33893.1} {RNA815_16689.1}
3. MligTC455_32522 134 2.8 Mlig455_040944

Neo: -

Age: -

 1.781 - - 0.829 - - 0.952 Mlig455_040944 {REF} {Length: 2473} {RNA1509_46835} {RNA1310_21335.2} {RNA815_21965}
4. MligTC455_35505 126 2.62 Mlig455_018997, Mlig455_022533, Mlig455_055707

Neo: -

Age: -

 HRH2, SYT7 1.775 - 0.818 - - - 0.957

Mlig455_018997 {REF} {Length: 4854} {Pfam: C2 domain [PF00168.32, score=156.5]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [RH, Score=271, Expect=9e-84]} {Mouse: ENSMUSG00000024743, Syt7, synaptotagmin VII, [RH, Score=261, Expect=3e-81]} {Dmel: FBgn0039900, Syt7, Synaptotagmin 7, [RH, Score=243, Expect=4e-76]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [RH, Score=182, Expect=1e-53]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=199, Expect=6e-60]} {RNA1310_29722} {RNA815_16467}

Mlig455_022533 {REF} {Length: 1223} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=80.1]} {Human: ENSG00000113749, HRH2, histamine receptor H2, [Score=68.6, Expect=4e-12]} {Mouse: ENSMUSG00000044338, Aplnr, apelin receptor, [Score=64.3, Expect=7e-11]; ENSMUSG00000037424, Taar9, trace amine-associated receptor 9, [Score=63.9, Expect=9e-11]; ENSMUSG00000034987, Hrh2, histamine receptor H2, [Score=63.2, Expect=2e-10]} {Dmel: FBgn0039595, AstA-R2, Allatostatin A receptor 2, [Score=53.1, Expect=2e-07]} {Smed: dd_Smed_v6_15036_0_1, dd_Smed_v6_15036_0_1, [Score=63.2, Expect=9e-11]}

Mlig455_055707 {REF} {Length: 2803} {Pfam: C2 domain [PF00168.32, score=156.6]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [RH, Score=270, Expect=2e-83]} {Mouse: ENSMUSG00000024743, Syt7, synaptotagmin VII, [RH, Score=259, Expect=4e-81]} {Dmel: FBgn0039900, Syt7, Synaptotagmin 7, [RH, Score=243, Expect=2e-76]} {Celegans: WBGene00004926, snt-6, SyNapTotagmin, [RH, Score=182, Expect=1e-53]} {Smed: dd_Smed_v6_4222_0_1, dd_Smed_v6_4222_0_1, [Score=199, Expect=4e-60]} {RNA1310_29722} {RNA815_16467}
5. MligTC455_19329 90 1.88 Mlig455_068578

Neo: -

Age: -

Region-enriched R2: 3.988/0.02701

 CHAT 1.758 - 0.804 - 0.954 - - Mlig455_068578 {REF} {Length: 3661} {TRANSSPLICED} {Pfam: Choline/Carnitine o-acyltransferase [PF00755.22, score=556.7]} {Human: ENSG00000070748, CHAT, choline O-acetyltransferase, [RH, Score=519, Expect=2e-177]} {Mouse: ENSMUSG00000021919, Chat, choline acetyltransferase, [RH, Score=520, Expect=7e-178]} {Dmel: FBgn0000303, ChAT, Choline acetyltransferase, [RH, Score=488, Expect=1e-164]} {Celegans: WBGene00000481, cha-1, Choline O-acetyltransferase, [RH, Score=363, Expect=2e-117]} {Smed: dd_Smed_v6_6208_0_1, dd_Smed_v6_6208_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_36058} {RNA1310_3092, RNA1509_36058} {RNA1509_36058, RNA815_2435.1}
6. MligTC455_49304 46 0.95 Mlig455_044321

Neo: -

Age: -

 1.749 - - - 0.780 - 0.969 Mlig455_044321 {REF} {Length: 701} {RNA1509_20965} {RNA1310_92283}
7. MligTC455_47537 1546 32.22 Mlig455_025825, Mlig455_067628

Neo: -

Age: -

Region-enriched R2: 2.005/0.00057

 CALM2 1.705 - - 0.745 0.960 - -

Mlig455_025825 {REF} {Length: 1517} {Pfam: EF-hand domain pair [PF13499.8, score=110.1]; EF hand [PF00036.34, score=108.5]; EF-hand domain pair [PF13833.8, score=85.9]; EF hand [PF13202.8, score=77.9]; EF-hand domain [PF13405.8, score=74.6]; EF-hand domain [PF14658.8, score=42.9]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=28.9]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.2]; EF hand [PF14788.8, score=19.6]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=97.8, Expect=1e-25]; ENSG00000198668, CALM1, calmodulin 1, [Score=96.7, Expect=9e-26]; ENSG00000160014, CALM3, calmodulin 3, [Score=96.7, Expect=9e-26]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=97.8, Expect=2e-26]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=96.7, Expect=6e-26]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=96.7, Expect=6e-26]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=96.7, Expect=6e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=96.7, Expect=5e-26]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=96.7, Expect=4e-26]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=96.7, Expect=3e-26]} {RNA1509_17413, RNA1509_39138} {RNA1310_29051, RNA1509_17413, RNA1509_39138} {RNA1509_17413, RNA1509_39138, RNA815_15566.1}

Mlig455_067628 {REF} {Length: 858} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=109.8]; EF hand [PF00036.34, score=108.3]; EF-hand domain pair [PF13833.8, score=85.1]; EF hand [PF13202.8, score=77.7]; EF-hand domain [PF13405.8, score=74.4]; EF-hand domain [PF14658.8, score=41.4]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=28.4]; EF hand [PF14788.8, score=19.7]; Dockerin type I domain [PF00404.20, score=19.2]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=98.2, Expect=1e-25]; ENSG00000160014, CALM3, calmodulin 3, [Score=97.1, Expect=8e-26]; ENSG00000198668, CALM1, calmodulin 1, [Score=97.1, Expect=8e-26]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=98.2, Expect=2e-26]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=97.1, Expect=5e-26]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=97.1, Expect=5e-26]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=97.1, Expect=5e-26]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=97.4, Expect=3e-26]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=97.1, Expect=2e-26]} {Smed: dd_Smed_v6_414_0_1, dd_Smed_v6_414_0_1, [Score=97.1, Expect=2e-26]} {RNA1509_33581, RNA1509_39138, RNA1509_52504} {RNA1310_29051, RNA1509_33581, RNA1509_52504} {RNA1509_33581, RNA1509_52504, RNA815_15566.1}
8. MligTC455_53190 105 2.18 Mlig455_013516

Neo: -

Age: -

 SCNN1B 1.668 - 0.952 - 0.716 - - Mlig455_013516 {REF} {Length: 2819} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=290.8]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=158, Expect=8e-41]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=149, Expect=1e-37]} {Dmel: FBgn0051105, ppk22, pickpocket 22, [RH, Score=60.1, Expect=3e-09]} {Celegans: WBGene00006748, unc-8, Degenerin unc-8, [RH, Score=166, Expect=2e-43]} {Smed: dd_Smed_v6_17021_0_1, dd_Smed_v6_17021_0_1, [RH, Score=186, Expect=1e-51]} {RNA1509_18670} {RNA1310_20526} {RNA815_9932}
9. MligTC455_45573 512 10.67 Mlig455_009859

Neo: -

Age: Down-Down-Up

 TIA1 0.971 - - - - - 0.971 Mlig455_009859 {REF} {Length: 2779} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=139.0]; RNA recognition motif [PF16367.7, score=31.5]; RNA binding motif [PF08777.13, score=22.6]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=21.4]; Occluded RNA-recognition motif [PF16842.7, score=21.3]; Cytosolic domain of 10TM putative phosphate transporter [PF14703.8, score=19.7]; Histone lysine methyltransferase SET associated [PF11767.10, score=18.7]} {Human: ENSG00000116001, TIA1, TIA1 cytotoxic granule associated RNA binding protein, [Score=218, Expect=5e-67]; ENSG00000151923, TIAL1, TIA1 cytotoxic granule associated RNA binding protein like 1, [Score=209, Expect=2e-63]} {Mouse: ENSMUSG00000071337, Tia1, cytotoxic granule-associated RNA binding protein 1, [Score=216, Expect=1e-66]; ENSMUSG00000030846, Tial1, Tia1 cytotoxic granule-associated RNA binding protein-like 1, [Score=211, Expect=6e-65]} {Dmel: FBgn0085391, trv, trivet, [RH, Score=231, Expect=3e-71]} {Celegans: WBGene00015943, tiar-1, TIA-1/TIAL RNA binding protein homolog, [Score=210, Expect=1e-65]} {Smed: dd_Smed_v6_10924_0_1, dd_Smed_v6_10924_0_1, [Score=319, Expect=5e-107]} {RNA1509_12173} {RNA1310_17261.1, RNA1509_12173} {RNA1509_12173, RNA815_23801}
10. MligTC455_12297 36 0.74 Mlig455_027069

Neo: -

Age: -

Regeneration-upregulated R2: 6.043

Regeneration-enriched R2: 6.043

 0.969 - - - - 0.969 - Mlig455_027069 {REF} {Length: 1928} {NoTransDecoderORF} {RNA1310_50186}
11. MligTC455_13456 43 0.89 Mlig455_065240

Neo: -

Age: -

 ARRDC3 0.967 - - - - - 0.967 Mlig455_065240 {REF} {Length: 1385} {TRANSSPLICED} {Pfam: Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=64.6]; Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=54.7]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=81.6, Expect=2e-17]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=81.6, Expect=1e-17]} {Dmel: FBgn0037465, CG1105, [Score=95.5, Expect=1e-22]} {Celegans: WBGene00012467, arrd-8, ARRestin Domain protein, [Score=83.6, Expect=9e-19]} {RNA1310_40788} {RNA815_61509}
12. MligTC455_10064 68 1.41 Mlig455_029458, Mlig455_029482

Neo: -

Age: -

 0.964 - - - - - 0.964

Mlig455_029458 {REF} {Length: 1576} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=28.7]} {RNA1310_20120.1} {RNA815_50604}

Mlig455_029482 {REF} {Length: 3696} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=29.0]} {RNA1310_20120.1} {RNA815_30795}
13. MligTC455_12298 30 0.63 Mlig455_030745

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_030745 {REF} {Length: 3205} {RNA1310_50186} {RNA815_38061}
14. MligTC455_12390 239 4.98 Mlig455_033352, Mlig455_033374

Neo: -

Age: -

Region-enriched R8: 4.186/0.00002

 SLC16A14 0.964 - - - - - 0.964

Mlig455_033352 {REF} {Length: 3261} {Pfam: Major Facilitator Superfamily [PF07690.18, score=118.6]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=47.1]; Sugar (and other) transporter [PF00083.26, score=25.8]; MFS_1 like family [PF12832.9, score=20.5]; Type II CAAX prenyl endopeptidase Rce1-like [PF02517.18, score=19.9]; Vacuole effluxer Atg22 like [PF11700.10, score=19.2]} {Human: ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [RH, Score=207, Expect=4e-60]} {Mouse: ENSMUSG00000026220, Slc16a14, solute carrier family 16 (monocarboxylic acid transporters), member 14, [RH, Score=214, Expect=2e-62]} {Dmel: FBgn0023549, Mct1, Monocarboxylate transporter 1, [Score=186, Expect=1e-51]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=257, Expect=3e-78]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=332, Expect=2e-107]} {RNA1509_37961} {RNA1310_14005} {RNA815_25187}

Mlig455_033374 {REF} {Length: 3256} {Pfam: Major Facilitator Superfamily [PF07690.18, score=121.7]; Uncharacterised MFS-type transporter YbfB [PF06779.16, score=48.2]; Sugar (and other) transporter [PF00083.26, score=28.4]; Type II CAAX prenyl endopeptidase Rce1-like [PF02517.18, score=22.2]; MFS_1 like family [PF12832.9, score=20.5]; Vacuole effluxer Atg22 like [PF11700.10, score=19.2]} {Human: ENSG00000163053, SLC16A14, solute carrier family 16 member 14, [RH, Score=211, Expect=3e-61]} {Mouse: ENSMUSG00000026220, Slc16a14, solute carrier family 16 (monocarboxylic acid transporters), member 14, [RH, Score=217, Expect=1e-63]} {Dmel: FBgn0023549, Mct1, Monocarboxylate transporter 1, [Score=187, Expect=6e-52]} {Celegans: WBGene00015676, mct-6, MonoCarboxylate Transporter family, [Score=258, Expect=2e-78]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=334, Expect=4e-108]} {RNA1509_37961} {RNA1310_14005, RNA1509_37961} {RNA1509_37961, RNA815_25187}
15. MligTC455_13621 71 1.48 Mlig455_055842

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_055842 {REF} {Length: 653} {NoTransDecoderORF} {RNA1509_33034} {RNA1310_614.1}
16. MligTC455_41646 246 5.12 Mlig455_000631

Neo: -

Age: Up-Down-Up

 0.961 - - - 0.961 - - Mlig455_000631 {REF} {Length: 1608} {RNA1310_28616} {RNA815_27263}
17. MligTC455_50542 61 1.28 Mlig455_033117

Neo: -

Age: logFC(26M/2M)=-1.103

 NFIA 0.961 - - - - - 0.961 Mlig455_033117 {REF} {Length: 3593} {Human: ENSG00000162599, NFIA, nuclear factor I A, [Score=85.1, Expect=1e-16]; ENSG00000147862, NFIB, nuclear factor I B, [Score=84.0, Expect=2e-16]; ENSG00000008441, NFIX, nuclear factor I X, [Score=82.4, Expect=8e-16]; ENSG00000141905, NFIC, nuclear factor I C, [Score=81.6, Expect=1e-15]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [Score=84.3, Expect=6e-17]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [Score=84.3, Expect=1e-16]; ENSMUSG00000055053, Nfic, nuclear factor I/C, [Score=82.8, Expect=2e-16]; ENSMUSG00000001911, Nfix, nuclear factor I/X, [Score=81.3, Expect=1e-15]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=84.3, Expect=1e-16]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=90.5, Expect=1e-18]} {Smed: dd_Smed_v6_12312_0_1, dd_Smed_v6_12312_0_1, [Score=151, Expect=1e-37]} {RNA1310_40008.1} {RNA815_37863}
18. MligTC455_55516 6 0.12 Mlig455_003582

Neo: -

Age: -

 0.961 - - - - 0.961 - Mlig455_003582 {REF} {Length: 213} {NoTransDecoderORF}
19. MligTC455_10518 19 0.39 Mlig455_033554

Neo: -

Age: -

 RHCG 0.957 - - - - 0.957 - Mlig455_033554 {REF} {Length: 3086} {Pfam: Ammonium Transporter Family [PF00909.23, score=406.6]; Death domain [PF00531.24, score=36.2]; Tumor necrosis factor receptor member 16 trans-membrane domain [PF18422.3, score=23.6]} {Human: ENSG00000140519, RHCG, Rh family C glycoprotein, [Score=60.8, Expect=5e-09]} {Mouse: ENSMUSG00000030549, Rhcg, Rhesus blood group-associated C glycoprotein, [Score=57.4, Expect=5e-08]} {Dmel: FBgn0038309, Amt, Ammonium transporter, [RH, Score=441, Expect=2e-145]} {Celegans: WBGene00000135, amt-3, Putative ammonium transporter 3, [RH, Score=407, Expect=9e-131]} {Smed: dd_Smed_v6_2323_0_1, dd_Smed_v6_2323_0_1, [Score=52.4, Expect=8e-07]} {RNA1509_53274} {RNA1310_14916} {RNA815_10943}
20. MligTC455_18800 26 0.55 Mlig455_031326

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_031326 {REF} {Length: 964} {TRANSSPLICED}
21. MligTC455_50317 36 0.75 Mlig455_010739

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.783

 0.956 - - - - - 0.956 Mlig455_010739 {REF} {Length: 2550} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=72.7]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [Score=49.3, Expect=3e-06]} {RNA1310_88401} {RNA815_12523}
22. MligTC455_19325 1452 30.24 Mlig455_036471, Mlig455_056256

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.575

Region-enriched R2: 2.298/0.00464
Region-enriched R8: 2.134/0.01396

 0.955 - - - 0.955 - -

Mlig455_036471 {REF} {Length: 598} {RNA1509_40294} {RNA1310_65876} {RNA815_35457}

Mlig455_056256 {REF} {Length: 599} {RNA1509_40294} {RNA1310_65876, RNA1509_40294} {RNA1509_40294, RNA815_35457}
23. MligTC455_12292 29 0.6 Mlig455_012303

Neo: -

Age: -

Regeneration-enriched BL: 8.351
Regeneration-enriched R6: 8.195
Regeneration-enriched R4: 8.172
Regeneration-enriched R3: 7.492
Regeneration-enriched R5: 6.081
Regeneration-enriched R2: 5.339

 0.954 - - - - 0.954 - Mlig455_012303 {REF} {Length: 1067} {NoTransDecoderORF} {RNA1509_39463} {RNA1310_75442} {RNA815_5572.1}
24. MligTC455_39396 469 9.77 Mlig455_031203

Neo: -

Age: -

Region-enriched R8: 3.069/0.00001

 ARRDC3 0.954 - - - 0.954 - - Mlig455_031203 {REF} {Length: 1835} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=114.8]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=66.5]; Rgp1 [PF08737.12, score=23.6]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=112, Expect=5e-27]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=113, Expect=1e-27]} {Dmel: FBgn0037517, CG10086, [RH, Score=85.1, Expect=1e-17]} {Celegans: WBGene00009579, arrd-6, ARRestin Domain protein, [RH, Score=322, Expect=2e-106]} {RNA1509_30037} {RNA1310_19411, RNA1509_30037} {RNA1509_30037, RNA815_7851}
25. MligTC455_32278 31 0.65 Mlig455_041080

Neo: -

Age: Up-Down-Down

 USH2A 0.953 - - - - - 0.953 Mlig455_041080 {REF} {Length: 15804} {Pfam: Fibronectin type III domain [PF00041.23, score=464.0]; Laminin EGF domain [PF00053.26, score=197.5]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=110.9]; Laminin G domain [PF02210.26, score=79.7]; Laminin G domain [PF00054.25, score=43.4]; Fibronectin type III domain [PF16893.7, score=43.3]; Chitinase A, N-terminal domain [PF08329.12, score=22.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=20.5]} {Human: ENSG00000042781, USH2A, usherin, [Score=1148, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1111, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=265, Expect=7e-70]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=267, Expect=1e-70]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=229, Expect=2e-59]} {RNA1509_43154} {RNA1310_15599} {RNA815_35868}
26. MligTC455_16657 842 17.53 Mlig455_042515

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.634

Region-enriched R7: 2.586/0.00000
Region-enriched R8: 2.572/0.00150

Regeneration-upregulated BL: 2.469

Regeneration-enriched BL: 2.469

 FERD3L 0.951 - - - - - 0.951 Mlig455_042515 {REF} {Length: 1703} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.2]} {Human: ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=4e-29]} {Mouse: ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=3e-29]} {Dmel: FBgn0037937, Fer3, 48 related 3, [RH, Score=119, Expect=5e-32]} {Celegans: WBGene00001957, hlh-13, Helix-loop-helix protein 13, [Score=67.8, Expect=1e-13]} {Smed: dd_Smed_v6_8096_0_1, dd_Smed_v6_8096_0_1, [RH, Score=120, Expect=2e-32]} {RNA1509_28158} {RNA1310_23170} {RNA815_15242}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA