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Results for MligTC455_15777

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15777 553 11.52 Mlig455_043004, Mlig455_043059

Neo: Irradiation

Age: logFC(26M/2M)=-0.376

 UBE4A

Mlig455_043004 {REF} {Length: 5498} {TRANSSPLICED} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=423.3]; U-box domain [PF04564.17, score=96.2]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [RH, Score=440, Expect=2e-136]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [RH, Score=445, Expect=1e-138]} {Dmel: FBgn0028467, CG11070, [Score=373, Expect=9e-113]} {Celegans: WBGene00006734, ufd-2, Probable ubiquitin conjugation factor E4, [Score=171, Expect=2e-43]} {Smed: dd_Smed_v6_4558_0_1, dd_Smed_v6_4558_0_1, [RH, Score=425, Expect=6e-132]} {RNA1509_25538} {RNA1310_4756} {RNA815_9670}

Mlig455_043059 {REF} {Length: 7893} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=421.8]; U-box domain [PF04564.17, score=94.6]; Scd6-like Sm domain [PF12701.9, score=90.5]; Ataxin 2 SM domain [PF14438.8, score=32.5]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [RH, Score=439, Expect=3e-132]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [RH, Score=445, Expect=1e-134]} {Dmel: FBgn0028467, CG11070, [RH, Score=371, Expect=6e-109]} {Celegans: WBGene00006734, ufd-2, Probable ubiquitin conjugation factor E4, [Score=169, Expect=2e-42]} {Smed: dd_Smed_v6_4558_0_1, dd_Smed_v6_4558_0_1, [RH, Score=424, Expect=9e-128]} {RNA1509_25538} {RNA1310_4756, RNA1509_25538} {RNA1509_25538, RNA815_9670}

Cumulative graph for MligTC455_15777

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.863 3.877 0.15657 0.77504
RegionR2 1.032 3.877 0.05013 0.26708
RegionR3 0.367 3.877 0.35515 0.89060
RegionR4 -0.138 3.877 0.78667 1.00000
RegionR5 0.017 3.877 0.96721 1.00000
RegionR6 0.292 3.877 0.47668 1.00000
RegionR7 0.134 3.877 0.80334 1.00000
RegionR8 0.158 3.877 0.81162 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.876 3.877 0.16175 0.90401
RegenerationR2 0.067 3.877 0.87860 1.00000
RegenerationR3 0.618 3.877 0.19949 0.63414
RegenerationR4 0.53 3.877 0.27555 0.72141
RegenerationR5 0.633 3.877 0.13284 0.54095
RegenerationR6 0.958 3.877 0.04386 0.26193
RegenerationBL -0.063 3.877 0.93377 1.00000
RegenerationTP 0.606 3.877 0.35227 0.79373


Genes with expression patterns similar to MligTC455_15777

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15777 553 11.52 Mlig455_043004, Mlig455_043059

Neo: Irradiation

Age: logFC(26M/2M)=-0.376

 UBE4A 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_043004 {REF} {Length: 5498} {TRANSSPLICED} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=423.3]; U-box domain [PF04564.17, score=96.2]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [RH, Score=440, Expect=2e-136]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [RH, Score=445, Expect=1e-138]} {Dmel: FBgn0028467, CG11070, [Score=373, Expect=9e-113]} {Celegans: WBGene00006734, ufd-2, Probable ubiquitin conjugation factor E4, [Score=171, Expect=2e-43]} {Smed: dd_Smed_v6_4558_0_1, dd_Smed_v6_4558_0_1, [RH, Score=425, Expect=6e-132]} {RNA1509_25538} {RNA1310_4756} {RNA815_9670}

Mlig455_043059 {REF} {Length: 7893} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=421.8]; U-box domain [PF04564.17, score=94.6]; Scd6-like Sm domain [PF12701.9, score=90.5]; Ataxin 2 SM domain [PF14438.8, score=32.5]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [RH, Score=439, Expect=3e-132]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [RH, Score=445, Expect=1e-134]} {Dmel: FBgn0028467, CG11070, [RH, Score=371, Expect=6e-109]} {Celegans: WBGene00006734, ufd-2, Probable ubiquitin conjugation factor E4, [Score=169, Expect=2e-42]} {Smed: dd_Smed_v6_4558_0_1, dd_Smed_v6_4558_0_1, [RH, Score=424, Expect=9e-128]} {RNA1509_25538} {RNA1310_4756, RNA1509_25538} {RNA1509_25538, RNA815_9670}
2. MligTC455_15776 390 8.13 Mlig455_029536, Mlig455_043042

Neo: -

Age: -

 UBE4A 4.684 0.924 0.959 0.963 0.875 0.963 -

Mlig455_029536 {REF} {Length: 3713} {TRANSSPLICED} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=107.3]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [Score=62.8, Expect=6e-10]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [Score=65.9, Expect=7e-11]} {Dmel: FBgn0028467, CG11070, [Score=50.1, Expect=4e-06]} {RNA1509_13612} {RNA1310_4756} {RNA815_9670}

Mlig455_043042 {REF} {Length: 4810} {Pfam: Ubiquitin elongating factor core [PF10408.11, score=424.1]; U-box domain [PF04564.17, score=96.4]} {Human: ENSG00000110344, UBE4A, ubiquitination factor E4A, [RH, Score=441, Expect=8e-137]} {Mouse: ENSMUSG00000059890, Ube4a, ubiquitination factor E4A, [RH, Score=447, Expect=2e-139]} {Dmel: FBgn0028467, CG11070, [RH, Score=373, Expect=1e-112]} {Celegans: WBGene00006734, ufd-2, Probable ubiquitin conjugation factor E4, [Score=171, Expect=2e-43]} {Smed: dd_Smed_v6_4558_0_1, dd_Smed_v6_4558_0_1, [RH, Score=424, Expect=1e-131]} {RNA1509_24289, RNA1509_25538} {RNA1310_4756, RNA1509_24289} {RNA1509_24289, RNA815_9670}
3. MligTC455_43816 875 18.23 Mlig455_047962

Neo: Int S/G2/M

Age: -

 CDC73 1.785 - - - - 0.831 0.954 Mlig455_047962 {REF} {Length: 2631} {Pfam: Paf1 complex subunit CDC73 N-terminal [PF16050.7, score=263.8]; RNA pol II accessory factor, Cdc73 family, C-terminal [PF05179.16, score=159.4]} {Human: ENSG00000134371, CDC73, cell division cycle 73, [RH, Score=296, Expect=5e-92]} {Mouse: ENSMUSG00000026361, Cdc73, cell division cycle 73, Paf1/RNA polymerase II complex component, [RH, Score=296, Expect=3e-92]} {Dmel: FBgn0037657, hyx, hyrax, [RH, Score=280, Expect=4e-86]} {Celegans: WBGene00018064, cdc-73, Cell division cycle protein 73, [RH, Score=145, Expect=3e-37]} {Smed: dd_Smed_v6_3056_0_1, dd_Smed_v6_3056_0_1, [RH, Score=292, Expect=3e-90]} {RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183} {RNA1310_6871.1, RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183} {RNA1509_11097, RNA1509_45243, RNA1509_47783, RNA1509_48317, RNA1509_56989, RNA1509_57062, RNA1509_59183, RNA815_2766.1}
4. MligTC455_42916 684 14.24 Mlig455_034843

Neo: -

Age: -

Region-enriched R5: 2.026/0.00020
Region-enriched R4: 1.960/0.00817

 COX19 1.747 0.795 - - - - 0.952 Mlig455_034843 {REF} {Length: 508} {TRANSSPLICED} {Pfam: CHCH domain [PF06747.15, score=32.5]; CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, [PF16860.7, score=21.6]; Cytochrome c oxidase assembly protein PET191 [PF10203.11, score=20.5]; NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) [PF05676.15, score=19.0]} {Human: ENSG00000240230, COX19, cytochrome c oxidase assembly factor COX19, [RH, Score=85.9, Expect=4e-23]} {Mouse: ENSMUSG00000045438, Cox19, cytochrome c oxidase assembly protein 19, [RH, Score=81.3, Expect=2e-21]} {Dmel: FBgn0260222, CG42496, [RH, Score=75.9, Expect=1e-19]} {Celegans: WBGene00009745, F45H11.5, [RH, Score=75.9, Expect=1e-19]} {Smed: dd_Smed_v6_2404_0_1, dd_Smed_v6_2404_0_1, [RH, Score=79.3, Expect=3e-21]} {RNA1509_11007} {RNA1310_64150.1} {RNA815_34075}
5. MligTC455_40542 602 12.53 Mlig455_069897

Neo: -

Age: Up-Down-Up

 UBE3C 0.98 - - - - - 0.980 Mlig455_069897 {REF} {Length: 4281} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=262.5]} {Human: ENSG00000009335, UBE3C, ubiquitin protein ligase E3C, [RH, Score=365, Expect=9e-109]} {Mouse: ENSMUSG00000039000, Ube3c, ubiquitin protein ligase E3C, [RH, Score=363, Expect=3e-108]} {Dmel: FBgn0034989, CG3356, [RH, Score=352, Expect=4e-104]} {Celegans: WBGene00008429, etc-1, E3 ubiquitin-protein ligase etc-1, [RH, Score=254, Expect=2e-70]} {Smed: dd_Smed_v6_8915_0_1, dd_Smed_v6_8915_0_1, [RH, Score=319, Expect=9e-93]} {RNA1509_52489, RNA1509_7273} {RNA1310_2336, RNA1509_52489} {RNA1509_52489, RNA815_688.1}
6. MligTC455_32250 1432 29.84 Mlig455_002446, Mlig455_002727, Mlig455_027612, Mlig455_063342

Neo: -

Age: Down-Up-Down

 SIRT1 0.979 - - - - - 0.979

Mlig455_002446 {REF} {Length: 4463} {Pfam: Sir2 family [PF02146.19, score=204.1]} {Human: ENSG00000096717, SIRT1, sirtuin 1, [RH, Score=387, Expect=2e-125]} {Mouse: ENSMUSG00000020063, Sirt1, sirtuin 1, [RH, Score=385, Expect=3e-125]} {Dmel: FBgn0024291, Sirt1, Sirtuin 1, [RH, Score=379, Expect=1e-121]} {Celegans: WBGene00004800, sir-2.1, NAD-dependent protein deacetylase sir-2.1, [RH, Score=311, Expect=3e-98]} {Smed: dd_Smed_v6_12799_0_1, dd_Smed_v6_12799_0_1, [RH, Score=378, Expect=8e-125]} {RNA1509_27408} {RNA1310_2074.1} {RNA815_382}

Mlig455_002727 {REF} {Length: 4515} {Pfam: Sir2 family [PF02146.19, score=203.3]} {Human: ENSG00000096717, SIRT1, sirtuin 1, [RH, Score=394, Expect=1e-125]} {Mouse: ENSMUSG00000020063, Sirt1, sirtuin 1, [RH, Score=391, Expect=2e-125]} {Dmel: FBgn0024291, Sirt1, Sirtuin 1, [RH, Score=381, Expect=4e-120]} {Celegans: WBGene00004800, sir-2.1, NAD-dependent protein deacetylase sir-2.1, [RH, Score=312, Expect=1e-96]} {Smed: dd_Smed_v6_12799_0_1, dd_Smed_v6_12799_0_1, [RH, Score=380, Expect=4e-123]} {RNA1509_27408, RNA1509_41911, RNA1509_43300, RNA1509_7277} {RNA1310_2074.1, RNA1509_27408, RNA1509_41911, RNA1509_43300, RNA1509_7277} {RNA1509_27408, RNA1509_41911, RNA1509_43300, RNA1509_7277, RNA815_382}

Mlig455_027612 {REF} {Length: 1805} {RNA1509_46103} {RNA1310_63625} {RNA815_49210.2}

Mlig455_063342 {REF} {Length: 333} {NoTransDecoderORF} {RNA1509_7277} {RNA1310_2074.1} {RNA815_13764.3}
7. MligTC455_32249 712 14.83 Mlig455_063343

Neo: Irradiation

Age: -

 SIRT1 0.978 - - - - - 0.978 Mlig455_063343 {REF} {Length: 4216} {Pfam: Sir2 family [PF02146.19, score=203.3]} {Human: ENSG00000096717, SIRT1, sirtuin 1, [RH, Score=397, Expect=1e-126]} {Mouse: ENSMUSG00000020063, Sirt1, sirtuin 1, [RH, Score=394, Expect=2e-126]} {Dmel: FBgn0024291, Sirt1, Sirtuin 1, [RH, Score=381, Expect=4e-120]} {Celegans: WBGene00004800, sir-2.1, NAD-dependent protein deacetylase sir-2.1, [RH, Score=315, Expect=2e-97]} {Smed: dd_Smed_v6_12799_0_1, dd_Smed_v6_12799_0_1, [RH, Score=378, Expect=2e-122]} {RNA1509_7277} {RNA1310_2074.1} {RNA815_382}
8. MligTC455_03206 655 13.64 Mlig455_035502

Neo: -

Age: Down-Up-Down

Region-enriched R5: 1.730/0.01050

 PGAP3 0.969 - - - - - 0.969 Mlig455_035502 {REF} {Length: 2076} {TRANSSPLICED} {Pfam: Per1-like family [PF04080.15, score=272.7]} {Human: ENSG00000161395, PGAP3, post-GPI attachment to proteins 3, [RH, Score=194, Expect=3e-59]} {Mouse: ENSMUSG00000038208, Pgap3, post-GPI attachment to proteins 3, [RH, Score=203, Expect=4e-63]} {Dmel: FBgn0033088, PGAP3, Post-GPI attachment to proteins 3, [RH, Score=231, Expect=1e-73]} {Celegans: WBGene00019806, R01B10.4, [RH, Score=131, Expect=1e-35]} {Smed: dd_Smed_v6_11282_0_3, dd_Smed_v6_11282_0_3, [RH, Score=216, Expect=2e-68]} {RNA1509_18759, RNA1509_28027} {RNA1310_9223.1, RNA1509_18759, RNA1509_28027} {RNA1509_18759, RNA1509_28027, RNA815_12781}
9. MligTC455_39174 766 15.96 Mlig455_051976

Neo: -

Age: logFC(26M/2M)=-0.264

 KLHL20 0.967 - - - - - 0.967 Mlig455_051976 {REF} {Length: 3608} {Pfam: Kelch motif [PF01344.27, score=277.5]; BTB And C-terminal Kelch [PF07707.17, score=124.7]; Kelch motif [PF13964.8, score=116.6]; BTB/POZ domain [PF00651.33, score=108.7]; Galactose oxidase, central domain [PF13415.8, score=69.4]; Galactose oxidase, central domain [PF13418.8, score=65.5]; Kelch motif [PF07646.17, score=59.0]} {Human: ENSG00000076321, KLHL20, kelch like family member 20, [RH, Score=884, Expect=0.0]} {Mouse: ENSMUSG00000026705, Klhl20, kelch-like 20, [RH, Score=884, Expect=0.0]} {Dmel: FBgn0040230, dbo, diablo, [RH, Score=857, Expect=0.0]} {Celegans: WBGene00020030, R12E2.1, [RH, Score=708, Expect=0.0]} {Smed: dd_Smed_v6_6164_0_1, dd_Smed_v6_6164_0_1, [RH, Score=881, Expect=0.0]} {RNA1509_14674, RNA1509_34040, RNA1509_34907, RNA1509_54335} {RNA1310_8392, RNA1509_14674, RNA1509_34040, RNA1509_34907, RNA1509_54335} {RNA1509_14674, RNA1509_34040, RNA1509_34907, RNA1509_54335, RNA815_4073}
10. MligTC455_30139 688 14.34 Mlig455_059811

Neo: -

Age: -

 TBC1D22B 0.963 - - - - - 0.963 Mlig455_059811 {REF} {Length: 8476} {Pfam: Rab-GTPase-TBC domain [PF00566.20, score=144.0]; Spt20 family [PF12090.10, score=18.3]} {Human: ENSG00000065491, TBC1D22B, TBC1 domain family member 22B, [RH, Score=387, Expect=4e-130]; ENSG00000054611, TBC1D22A, TBC1 domain family member 22A, [RH, Score=380, Expect=5e-128]} {Mouse: ENSMUSG00000042203, Tbc1d22b, TBC1 domain family, member 22B, [RH, Score=387, Expect=4e-130]; ENSMUSG00000051864, Tbc1d22a, TBC1 domain family, member 22a, [RH, Score=374, Expect=8e-125]} {Dmel: FBgn0038855, CG5745, [RH, Score=325, Expect=8e-106]} {Celegans: WBGene00009322, tbc-3, TBC (Tre-2/Bub2/Cdc16) domain family, [RH, Score=318, Expect=1e-103]} {Smed: dd_Smed_v6_8230_0_1, dd_Smed_v6_8230_0_1, [RH, Score=405, Expect=4e-138]} {RNA1509_15226, RNA1509_22528, RNA1509_28370, RNA1509_33333, RNA1509_46427, RNA1509_5073} {RNA1310_15852.1, RNA1509_22528, RNA1509_28370, RNA1509_33333, RNA1509_46427, RNA1509_5073} {RNA1509_22528, RNA1509_28370, RNA1509_33333, RNA1509_46427, RNA1509_5073, RNA815_5429}
11. MligTC455_46139 983 20.47 Mlig455_002906

Neo: -

Age: -

Region-enriched R4: 1.656/0.03277
Region-enriched R5: 1.521/0.01978

 TMUB1 0.955 - - - - - 0.955 Mlig455_002906 {REF} {Length: 3194} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=32.7]} {Human: ENSG00000164897, TMUB1, transmembrane and ubiquitin like domain containing 1, [RH, Score=76.6, Expect=3e-15]} {Mouse: ENSMUSG00000028958, Tmub1, transmembrane and ubiquitin-like domain containing 1, [RH, Score=79.3, Expect=3e-16]} {Smed: dd_Smed_v6_5590_0_1, dd_Smed_v6_5590_0_1, [RH, Score=132, Expect=3e-35]} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1310_3418.1, RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737} {RNA1509_27877, RNA1509_30638, RNA1509_43728, RNA1509_5737, RNA815_1023}
12. MligTC455_44573 1135 23.64 Mlig455_067692

Neo: -

Age: -

Region-enriched R5: 2.283/0.00101

 BLMH 0.953 - - - - - 0.953 Mlig455_067692 {REF} {Length: 2399} {TRANSSPLICED} {Pfam: Peptidase C1-like family [PF03051.17, score=458.0]; Papain family cysteine protease [PF00112.25, score=26.6]} {Human: ENSG00000108578, BLMH, bleomycin hydrolase, [RH, Score=438, Expect=9e-151]} {Mouse: ENSMUSG00000020840, Blmh, bleomycin hydrolase, [RH, Score=433, Expect=9e-149]} {Dmel: FBgn0030038, CG1440, [RH, Score=351, Expect=2e-116]} {RNA1509_17858, RNA1509_7023} {RNA1310_11117.1, RNA1509_17858, RNA1509_7023} {RNA1509_17858, RNA1509_7023, RNA815_10974}
13. MligTC455_48349 754 15.72 Mlig455_014611

Neo: -

Age: -

Region-enriched R2: 1.733/0.01839

 NADSYN1 0.953 - - - - - 0.953 Mlig455_014611 {REF} {Length: 4083} {TRANSSPLICED} {Pfam: Carbon-nitrogen hydrolase [PF00795.24, score=113.6]; NAD synthase [PF02540.19, score=91.3]; Polyprenyl synthetase [PF00348.19, score=24.2]} {Human: ENSG00000172890, NADSYN1, NAD synthetase 1, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000031090, Nadsyn1, NAD synthetase 1, [RH, Score=830, Expect=0.0]} {Dmel: FBgn0030512, Nadsyn, NAD synthetase, [RH, Score=857, Expect=0.0]} {Celegans: WBGene00007698, qns-1, Glutamine(Q)-dependent NAD(+) Synthase, [RH, Score=596, Expect=0.0]} {Smed: dd_Smed_v6_7717_0_1, dd_Smed_v6_7717_0_1, [RH, Score=782, Expect=0.0]} {RNA1509_9825} {RNA1310_3572} {RNA815_1341.1}
14. MligTC455_40218 801 16.69 Mlig455_013163

Neo: Int S/G2/M

Age: -

 0.952 - - - - - 0.952 Mlig455_013163 {REF} {Length: 1228} {RNA1509_14011, RNA1509_31133} {RNA1310_32604, RNA1509_31133} {RNA1509_31133, RNA815_11423.1}
15. MligTC455_49106 1316 27.41 Mlig455_066709

Neo: -

Age: -

 LRMDA 0.95 - - - - - 0.950 Mlig455_066709 {REF} {Length: 1752} {TRANSSPLICED} {Pfam: Leucine-rich repeat [PF14580.8, score=28.0]; Leucine Rich repeats (2 copies) [PF12799.9, score=21.9]; Leucine rich repeat [PF13855.8, score=20.9]} {Human: ENSG00000148655, LRMDA, leucine rich melanocyte differentiation associated, [RH, Score=153, Expect=9e-46]} {Mouse: ENSMUSG00000063458, Lrmda, leucine rich melanocyte differentiation associated, [RH, Score=147, Expect=1e-43]} {Dmel: FBgn0051076, CG31076, [RH, Score=60.8, Expect=3e-11]} {Smed: dd_Smed_v6_1865_0_1, dd_Smed_v6_1865_0_1, [RH, Score=147, Expect=1e-43]} {RNA1509_11865} {RNA1310_18411} {RNA815_6884.1}

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