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Results for MligTC455_15875

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_15875 868 18.08 Mlig455_054229

Neo: -

Age: logFC(26M/2M)=-0.428

 HNRNPA1 Mlig455_054229 {REF} {Length: 2788} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=115.6]; RNA recognition motif [PF16367.7, score=47.9]} {Human: ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=184, Expect=1e-54]; ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=181, Expect=2e-53]; ENSG00000139675, HNRNPA1L2, heterogeneous nuclear ribonucleoprotein A1-like 2, [Score=178, Expect=2e-52]; ENSG00000170144, HNRNPA3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=181, Expect=4e-54]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=1e-53]; ENSMUSG00000059005, Hnrnpa3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=4e-52]; ENSMUSG00000092086, Gm6793, predicted gene 6793, [Score=178, Expect=2e-52]} {Dmel: FBgn0001215, Hrb98DE, Heterogeneous nuclear ribonucleoprotein at 98DE, [Score=178, Expect=2e-52]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=1e-53]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=188, Expect=2e-57]} {RNA1509_34434, RNA1509_36052} {RNA1310_19571, RNA1509_36052} {RNA1509_36052, RNA815_15616}

Cumulative graph for MligTC455_15875

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.831 4.442 0.30446 0.95366
RegionR2 -0.529 4.442 0.15662 0.49495
RegionR3 -0.257 4.442 0.36931 0.90456
RegionR4 0.591 4.442 0.09622 0.29936
RegionR5 0.467 4.442 0.06247 0.21944
RegionR6 -0.47 4.442 0.12300 0.63918
RegionR7 -0.163 4.442 0.66609 1.00000
RegionR8 -0.47 4.442 0.31752 0.95047

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.692 4.442 0.24034 0.96582
RegenerationR2 0.32 4.442 0.30375 0.74469
RegenerationR3 -0.213 4.442 0.54634 0.88169
RegenerationR4 -0.465 4.442 0.19655 0.64169
RegenerationR5 -0.485 4.442 0.11931 0.51803
RegenerationR6 0.324 4.442 0.38044 0.72166
RegenerationBL 0.477 4.442 0.27312 0.63290
RegenerationTP -0.109 4.442 0.81666 1.00000


Genes with expression patterns similar to MligTC455_15875

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_15875 868 18.08 Mlig455_054229

Neo: -

Age: logFC(26M/2M)=-0.428

 HNRNPA1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_054229 {REF} {Length: 2788} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=115.6]; RNA recognition motif [PF16367.7, score=47.9]} {Human: ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=184, Expect=1e-54]; ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=181, Expect=2e-53]; ENSG00000139675, HNRNPA1L2, heterogeneous nuclear ribonucleoprotein A1-like 2, [Score=178, Expect=2e-52]; ENSG00000170144, HNRNPA3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=181, Expect=4e-54]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=1e-53]; ENSMUSG00000059005, Hnrnpa3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=4e-52]; ENSMUSG00000092086, Gm6793, predicted gene 6793, [Score=178, Expect=2e-52]} {Dmel: FBgn0001215, Hrb98DE, Heterogeneous nuclear ribonucleoprotein at 98DE, [Score=178, Expect=2e-52]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=1e-53]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=188, Expect=2e-57]} {RNA1509_34434, RNA1509_36052} {RNA1310_19571, RNA1509_36052} {RNA1509_36052, RNA815_15616}
2. MligTC455_26264 329 6.86 Mlig455_062063

Neo: -

Age: Down-Down-Down

Region-enriched R5: 1.702/0.03238

 NR1I3 0.96 - - 0.960 - - - Mlig455_062063 {REF} {Length: 4111} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.2]} {Human: ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=103, Expect=1e-23]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=99.8, Expect=3e-22]; ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=99.4, Expect=1e-21]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=95.5, Expect=2e-20]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=98.2, Expect=7e-21]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=112, Expect=2e-25]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=183, Expect=2e-50]} {RNA1509_15212} {RNA1310_9731.1} {RNA815_11206}
3. MligTC455_47993 701 14.6 Mlig455_041093

Neo: -

Age: -

 LSM1 0.957 - - 0.957 - - - Mlig455_041093 {REF} {Length: 1552} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=48.3]} {Human: ENSG00000175324, LSM1, LSM1 homolog, mRNA degradation associated, [RH, Score=123, Expect=5e-36]} {Mouse: ENSMUSG00000037296, Lsm1, LSM1 homolog, mRNA degradation associated, [RH, Score=120, Expect=8e-35]} {Dmel: FBgn0261067, LSm1, Like Sm 1, [RH, Score=103, Expect=2e-28]} {Celegans: WBGene00003076, lsm-1, LSM Sm-like protein, [RH, Score=92.4, Expect=2e-24]} {Smed: dd_Smed_v6_6794_0_2, dd_Smed_v6_6794_0_2, [RH, Score=95.9, Expect=1e-25]} {RNA1509_23538} {RNA1310_19832.1} {RNA815_18339}

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