Data search
Results for MligTC455_47993
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_47993 | 701 | 14.60 | Mlig455_041093 | Neo: - Age: - |
LSM1 | Mlig455_041093 {REF} {Length: 1552} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=48.3]} {Human: ENSG00000175324, LSM1, LSM1 homolog, mRNA degradation associated, [RH, Score=123, Expect=5e-36]} {Mouse: ENSMUSG00000037296, Lsm1, LSM1 homolog, mRNA degradation associated, [RH, Score=120, Expect=8e-35]} {Dmel: FBgn0261067, LSm1, Like Sm 1, [RH, Score=103, Expect=2e-28]} {Celegans: WBGene00003076, lsm-1, LSM Sm-like protein, [RH, Score=92.4, Expect=2e-24]} {Smed: dd_Smed_v6_6794_0_2, dd_Smed_v6_6794_0_2, [RH, Score=95.9, Expect=1e-25]} {RNA1509_23538} {RNA1310_19832.1} {RNA815_18339} |
Cumulative graph for MligTC455_47993
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.361 | 4.171 | 0.68844 | 1.00000 | |
| RegionR2 | 0.126 | 4.171 | 0.76015 | 1.00000 | |
| RegionR3 | 0.085 | 4.171 | 0.77640 | 1.00000 | |
| RegionR4 | 0.286 | 4.171 | 0.45932 | 0.78735 | |
| RegionR5 | 0.119 | 4.171 | 0.66138 | 1.00000 | |
| RegionR6 | -0.099 | 4.171 | 0.75852 | 1.00000 | |
| RegionR7 | -0.522 | 4.171 | 0.23945 | 0.86372 | |
| RegionR8 | -0.355 | 4.171 | 0.49181 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.413 | 4.171 | 0.79665 | 1.00000 | |
| RegenerationR2 | -0.054 | 4.171 | 0.87521 | 1.00000 | |
| RegenerationR3 | 0.701 | 4.171 | 0.05658 | 0.40817 | |
| RegenerationR4 | -0.043 | 4.171 | 0.91571 | 1.00000 | |
| RegenerationR5 | 0.473 | 4.171 | 0.15407 | 0.57380 | |
| RegenerationR6 | 0.897 | 4.171 | 0.02014 | 0.17546 | |
| RegenerationBL | 0.209 | 4.171 | 0.72205 | 1.00000 | |
| RegenerationTP | 1.269 | 4.171 | 0.00878 | 0.15806 |
Genes with expression patterns similar to MligTC455_47993
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_47993 | 701 | 14.6 | Mlig455_041093 | Neo: - Age: - |
LSM1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041093 {REF} {Length: 1552} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=48.3]} {Human: ENSG00000175324, LSM1, LSM1 homolog, mRNA degradation associated, [RH, Score=123, Expect=5e-36]} {Mouse: ENSMUSG00000037296, Lsm1, LSM1 homolog, mRNA degradation associated, [RH, Score=120, Expect=8e-35]} {Dmel: FBgn0261067, LSm1, Like Sm 1, [RH, Score=103, Expect=2e-28]} {Celegans: WBGene00003076, lsm-1, LSM Sm-like protein, [RH, Score=92.4, Expect=2e-24]} {Smed: dd_Smed_v6_6794_0_2, dd_Smed_v6_6794_0_2, [RH, Score=95.9, Expect=1e-25]} {RNA1509_23538} {RNA1310_19832.1} {RNA815_18339} |
| 2. | MligTC455_47692 | 358 | 7.46 | Mlig455_004798 | Neo: - Age: Up-Down-Down Region-enriched R5: 1.250/0.00667 |
2.527 | 0.811 | - | 0.759 | 0.957 | - | - | Mlig455_004798 {REF} {Length: 1270} {NoTransDecoderORF} {RNA1509_31836} {RNA1310_47389, RNA1509_31836} {RNA1509_31836, RNA815_23742} | |
| 3. | MligTC455_42144 | 377 | 7.86 | Mlig455_022869 | Neo: Irradiation Age: - Region-enriched R5: 1.739/0.04174 |
BRIP1 | 1.713 | - | - | 0.747 | 0.966 | - | - | Mlig455_022869 {REF} {Length: 3883} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=179.3]; DEAD_2 [PF06733.17, score=167.3]; DEAD/DEAH box helicase [PF00270.31, score=18.7]} {Human: ENSG00000136492, BRIP1, BRCA1 interacting protein C-terminal helicase 1, [RH, Score=608, Expect=0.0]} {Mouse: ENSMUSG00000034329, Brip1, BRCA1 interacting protein C-terminal helicase 1, [RH, Score=656, Expect=0.0]} {Dmel: FBgn0029798, CG4078, [Score=217, Expect=9e-58]} {Celegans: WBGene00009124, rtel-1, Regulator of telomere elongation helicase 1 homolog, [RH, Score=267, Expect=2e-74]} {Smed: dd_Smed_v6_16638_0_2, dd_Smed_v6_16638_0_2, [RH, Score=435, Expect=2e-138]} {RNA1509_12020} {RNA1310_2305.2, RNA1509_12020} {RNA1509_12020, RNA815_995} |
| 4. | MligTC455_15875 | 868 | 18.08 | Mlig455_054229 | Neo: - Age: logFC(26M/2M)=-0.428 |
HNRNPA1 | 0.957 | - | - | 0.957 | - | - | - | Mlig455_054229 {REF} {Length: 2788} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=115.6]; RNA recognition motif [PF16367.7, score=47.9]} {Human: ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=184, Expect=1e-54]; ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=181, Expect=2e-53]; ENSG00000139675, HNRNPA1L2, heterogeneous nuclear ribonucleoprotein A1-like 2, [Score=178, Expect=2e-52]; ENSG00000170144, HNRNPA3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=181, Expect=4e-54]; ENSMUSG00000046434, Hnrnpa1, heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=1e-53]; ENSMUSG00000059005, Hnrnpa3, heterogeneous nuclear ribonucleoprotein A3, [Score=178, Expect=4e-52]; ENSMUSG00000092086, Gm6793, predicted gene 6793, [Score=178, Expect=2e-52]} {Dmel: FBgn0001215, Hrb98DE, Heterogeneous nuclear ribonucleoprotein at 98DE, [Score=178, Expect=2e-52]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=181, Expect=1e-53]} {Smed: dd_Smed_v6_1194_0_1, dd_Smed_v6_1194_0_1, [Score=188, Expect=2e-57]} {RNA1509_34434, RNA1509_36052} {RNA1310_19571, RNA1509_36052} {RNA1509_36052, RNA815_15616} |
| 5. | MligTC455_43744 | 1183 | 24.64 | Mlig455_067248 | Neo: - Age: - |
AASS | 0.957 | - | - | - | 0.957 | - | - | Mlig455_067248 {REF} {Length: 3137} {TRANSSPLICED} {Pfam: Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=73.9]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [Score=147, Expect=1e-38]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [Score=155, Expect=2e-40]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [Score=157, Expect=2e-41]} {Celegans: WBGene00019819, R02D3.1, [Score=154, Expect=2e-40]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [Score=148, Expect=1e-38]} {RNA1509_8607} {RNA1310_22407.1} {RNA815_16220} |
| 6. | MligTC455_43743 | 1342 | 27.97 | Mlig455_021405 | Neo: - Age: - |
AASS | 0.95 | - | - | - | 0.950 | - | - | Mlig455_021405 {REF} {Length: 3219} {TRANSSPLICED} {Pfam: Alanine dehydrogenase/PNT, N-terminal domain [PF05222.17, score=73.9]} {Human: ENSG00000008311, AASS, aminoadipate-semialdehyde synthase, [Score=149, Expect=3e-39]} {Mouse: ENSMUSG00000029695, Aass, aminoadipate-semialdehyde synthase, [Score=157, Expect=5e-41]} {Dmel: FBgn0025687, LKRSDH, Lysine ketoglutarate reductase/saccharopine dehydrogenase, [Score=158, Expect=1e-41]} {Celegans: WBGene00019819, R02D3.1, [Score=153, Expect=5e-40]} {Smed: dd_Smed_v6_2894_0_1, dd_Smed_v6_2894_0_1, [Score=149, Expect=1e-38]} {RNA1509_28021, RNA1509_8607} {RNA1310_16671, RNA1509_28021} {RNA1509_28021, RNA815_4687.1} |
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