Data search
Results for MligTC455_15956
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15956 | 529 | 11.03 | Mlig455_028163 | Neo: - |
Mlig455_028163 {REF} {Length: 3451} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF13606.8, score=30.7]; Ankyrin repeats (3 copies) [PF12796.9, score=30.0]; Ankyrin repeats (many copies) [PF13637.8, score=27.3]; Ankyrin repeat [PF00023.32, score=22.9]; Ankyrin repeats (many copies) [PF13857.8, score=19.8]} {RNA1509_12136, RNA1509_23936} {RNA1310_21816.1, RNA1509_12136, RNA1509_23936} {RNA1509_12136, RNA1509_23936, RNA815_8746} |
Cumulative graph for MligTC455_15956
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.12 | 3.882 | 0.02986 | 0.44500 | |
| RegionR2 | 0.619 | 3.882 | 0.48938 | 0.87154 | |
| RegionR3 | 1.26 | 3.882 | 0.05660 | 0.41871 | |
| RegionR4 | 1.594 | 3.882 | 0.01773 | 0.09342 | |
| RegionR5 | 1.445 | 3.882 | 0.01444 | 0.07607 | |
| RegionR6 | 1.225 | 3.882 | 0.07682 | 0.51425 | |
| RegionR7 | 0.911 | 3.882 | 0.30477 | 0.93929 | |
| RegionR8 | 0.065 | 3.882 | 0.83319 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.321 | 3.882 | 0.99999 | 1.00000 | |
| RegenerationR2 | 0.268 | 3.882 | 0.46113 | 0.85279 | |
| RegenerationR3 | -0.029 | 3.882 | 0.94178 | 1.00000 | |
| RegenerationR4 | -0.41 | 3.882 | 0.31960 | 0.75794 | |
| RegenerationR5 | 0.159 | 3.882 | 0.65778 | 0.93481 | |
| RegenerationR6 | 0.358 | 3.882 | 0.36856 | 0.71132 | |
| RegenerationBL | -0.068 | 3.882 | 0.90407 | 1.00000 | |
| RegenerationTP | 0.119 | 3.882 | 0.84958 | 1.00000 |
Genes with expression patterns similar to MligTC455_15956
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15956 | 529 | 11.03 | Mlig455_028163 | Neo: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_028163 {REF} {Length: 3451} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF13606.8, score=30.7]; Ankyrin repeats (3 copies) [PF12796.9, score=30.0]; Ankyrin repeats (many copies) [PF13637.8, score=27.3]; Ankyrin repeat [PF00023.32, score=22.9]; Ankyrin repeats (many copies) [PF13857.8, score=19.8]} {RNA1509_12136, RNA1509_23936} {RNA1310_21816.1, RNA1509_12136, RNA1509_23936} {RNA1509_12136, RNA1509_23936, RNA815_8746} | |
| 2. | MligTC455_48076 | 850 | 17.7 | Mlig455_070531 | Neo: - Age: - Region-enriched R2: 1.122/0.04544 |
RNF185 | 1.841 | - | - | - | 0.954 | - | 0.887 | Mlig455_070531 {REF} {Length: 1886} {TRANSSPLICED} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=40.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=40.4]; RING-type zinc-finger [PF13445.8, score=39.4]; Ring finger domain [PF13639.8, score=37.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=34.5]; Prokaryotic RING finger family 4 [PF14447.8, score=32.0]; zinc-RING finger domain [PF14634.8, score=31.6]; zinc finger of C3HC4-type, RING [PF15227.8, score=30.7]; RING-H2 zinc finger domain [PF12678.9, score=23.6]; Baculovirus immediate-early protein (IE-0) [PF05290.13, score=21.4]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.4]} {Human: ENSG00000138942, RNF185, ring finger protein 185, [RH, Score=166, Expect=1e-51]; ENSG00000227277, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000183574, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228405, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000228907, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000204308, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000225452, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]; ENSG00000223767, RNF5, ring finger protein 5, [RH, Score=159, Expect=2e-49]} {Mouse: ENSMUSG00000020448, Rnf185, ring finger protein 185, [RH, Score=168, Expect=7e-53]; ENSMUSG00000015478, Rnf5, ring finger protein 5, [RH, Score=161, Expect=3e-50]} {Dmel: FBgn0030693, CG8974, [RH, Score=152, Expect=2e-45]} {Celegans: WBGene00004381, rnf-5, RING finger protein 5, [RH, Score=134, Expect=2e-39]} {Smed: dd_Smed_v6_5004_0_1, dd_Smed_v6_5004_0_1, [RH, Score=167, Expect=1e-52]} {RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1310_12532.1, RNA1509_12431, RNA1509_35387, RNA1509_50361} {RNA1509_12431, RNA1509_35387, RNA1509_50361, RNA815_8137.1} |
| 3. | MligTC455_15405 | 771 | 16.05 | Mlig455_015125 | Neo: - Age: - |
CTBP2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_015125 {REF} {Length: 3617} {Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain [PF02826.21, score=185.9]; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain [PF00389.32, score=91.0]; NAD binding domain of 6-phosphogluconate dehydrogenase [PF03446.17, score=22.7]} {Human: ENSG00000175029, CTBP2, C-terminal binding protein 2, [RH, Score=507, Expect=5e-170]; ENSG00000159692, CTBP1, C-terminal binding protein 1, [RH, Score=498, Expect=5e-174]} {Mouse: ENSMUSG00000030970, Ctbp2, C-terminal binding protein 2, [RH, Score=507, Expect=6e-170]; ENSMUSG00000037373, Ctbp1, C-terminal binding protein 1, [RH, Score=502, Expect=2e-175]} {Dmel: FBgn0020496, CtBP, C-terminal Binding Protein, [RH, Score=547, Expect=0.0]} {Celegans: WBGene00006424, ctbp-1, C-terminal-binding protein 1, [RH, Score=391, Expect=9e-130]} {Smed: dd_Smed_v6_1063_0_1, dd_Smed_v6_1063_0_1, [RH, Score=536, Expect=0.0]} {RNA1509_41815} {RNA1310_15804.1, RNA1509_41815} {RNA1509_41815, RNA815_10755} |
| 4. | MligTC455_16893 | 1257 | 26.18 | Mlig455_048960 | Neo: - Age: logFC(26M/2M)=0.170 |
USP45 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_048960 {REF} {Length: 3200} {TRANSSPLICED} {Pfam: Ubiquitin carboxyl-terminal hydrolase [PF00443.31, score=164.3]; Zn-finger in ubiquitin-hydrolases and other protein [PF02148.21, score=57.6]; Histone H1-like nucleoprotein HC2 [PF07382.13, score=24.8]; Ubiquitin carboxyl-terminal hydrolase [PF13423.8, score=22.5]} {Human: ENSG00000123552, USP45, ubiquitin specific peptidase 45, [RH, Score=178, Expect=6e-46]} {Mouse: ENSMUSG00000040455, Usp45, ubiquitin specific petidase 45, [RH, Score=177, Expect=9e-46]} {Dmel: FBgn0029763, Usp16-45, Ubiquitin specific protease 16/45, [RH, Score=77.8, Expect=3e-14]} {Celegans: WBGene00008547, F07A11.4, Ubiquitin carboxyl-terminal hydrolase, [Score=82.8, Expect=7e-16]} {Smed: dd_Smed_v6_3775_0_1, dd_Smed_v6_3775_0_1, [Score=99.4, Expect=3e-21]} {RNA1509_11695, RNA1509_57335} {RNA1310_4501.1, RNA1509_57335} {RNA1509_57335, RNA815_15774} |
| 5. | MligTC455_44832 | 633 | 13.2 | Mlig455_016379 | Neo: - Age: - |
NEDD4L | 0.955 | - | - | - | - | - | 0.955 | Mlig455_016379 {REF} {Length: 5292} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=325.3]; WW domain [PF00397.28, score=163.6]; C2 domain [PF00168.32, score=89.1]} {Human: ENSG00000049759, NEDD4L, neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, [RH, Score=793, Expect=0.0]; ENSG00000069869, NEDD4, neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, [RH, Score=769, Expect=0.0]} {Mouse: ENSMUSG00000024589, Nedd4l, neural precursor cell expressed, developmentally down-regulated gene 4-like, [RH, Score=731, Expect=0.0]} {Dmel: FBgn0259174, Nedd4, [RH, Score=753, Expect=0.0]} {Celegans: WBGene00022358, Y92H12A.2, E3 ubiquitin-protein ligase, [RH, Score=620, Expect=0.0]} {Smed: dd_Smed_v6_7322_0_1, dd_Smed_v6_7322_0_1, [RH, Score=879, Expect=0.0]} {RNA1509_38104, RNA1509_39380, RNA1509_5978} {RNA1310_3271, RNA1509_38104, RNA1509_39380, RNA1509_5978} {RNA1509_38104, RNA1509_39380, RNA1509_5978, RNA815_784} |
| 6. | MligTC455_23892 | 62 | 1.3 | Mlig455_011973 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_011973 {REF} {Length: 438} {TRANSSPLICED} {RNA1509_37276} {RNA1310_21339} {RNA815_12138.1} | |
| 7. | MligTC455_32197 | 1086 | 22.62 | Mlig455_057844 | Neo: - Age: - Region-enriched R8: 1.410/0.01016 |
DST | 0.95 | - | - | - | - | 0.950 | - | Mlig455_057844 {REF} {Length: 12910} {Pfam: Spectrin repeat [PF00435.23, score=320.0]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=102.7]; EF hand [PF00036.34, score=38.8]; EF-hand domain pair [PF13499.8, score=35.4]; EF hand [PF13202.8, score=34.6]; EF-hand domain [PF13405.8, score=34.4]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=914, Expect=0.0]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=892, Expect=0.0]; ENSMUSG00000026131, Dst, dystonin, [Score=855, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [RH, Score=976, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [RH, Score=572, Expect=7e-164]} {Smed: dd_Smed_v6_1205_0_11, dd_Smed_v6_1205_0_11, [Score=791, Expect=0.0]} {RNA1509_6278} {RNA1310_33.1} {RNA815_47} |
Berezikov Lab - 2020-2021 © ERIBA