Data search


search
Exact
Search

Results for MligTC455_32197

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32197 1086 22.62 Mlig455_057844

Neo: -

Age: -

Region-enriched R8: 1.410/0.01016

DST Mlig455_057844 {REF} {Length: 12910} {Pfam: Spectrin repeat [PF00435.23, score=320.0]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=102.7]; EF hand [PF00036.34, score=38.8]; EF-hand domain pair [PF13499.8, score=35.4]; EF hand [PF13202.8, score=34.6]; EF-hand domain [PF13405.8, score=34.4]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=914, Expect=0.0]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=892, Expect=0.0]; ENSMUSG00000026131, Dst, dystonin, [Score=855, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [RH, Score=976, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [RH, Score=572, Expect=7e-164]} {Smed: dd_Smed_v6_1205_0_11, dd_Smed_v6_1205_0_11, [Score=791, Expect=0.0]} {RNA1509_6278} {RNA1310_33.1} {RNA815_47}

Cumulative graph for MligTC455_32197

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.796 4.697 0.30711 0.95600
RegionR2 0.889 4.697 0.00931 0.09627
RegionR3 -0.287 4.697 0.28969 0.83246
RegionR4 -1.082 4.697 0.00122 0.01214
RegionR5 -1.16 4.697 0.00001 0.00026
RegionR6 0.462 4.697 0.07511 0.50907
RegionR7 0.565 4.697 0.09458 0.58835
RegionR8 1.41 4.697 0.00013 0.01016

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.211 4.697 0.49183 1.00000
RegenerationR2 -0.11 4.697 0.69481 0.95477
RegenerationR3 0.392 4.697 0.23862 0.67296
RegenerationR4 0.252 4.697 0.45530 0.84450
RegenerationR5 0.392 4.697 0.21055 0.64427
RegenerationR6 -0.575 4.697 0.08203 0.35774
RegenerationBL -0.643 4.697 0.12142 0.41316
RegenerationTP -0.674 4.697 0.09256 0.47795


Genes with expression patterns similar to MligTC455_32197

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32197 1086 22.62 Mlig455_057844

Neo: -

Age: -

Region-enriched R8: 1.410/0.01016

DST 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_057844 {REF} {Length: 12910} {Pfam: Spectrin repeat [PF00435.23, score=320.0]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=102.7]; EF hand [PF00036.34, score=38.8]; EF-hand domain pair [PF13499.8, score=35.4]; EF hand [PF13202.8, score=34.6]; EF-hand domain [PF13405.8, score=34.4]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=914, Expect=0.0]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=892, Expect=0.0]; ENSMUSG00000026131, Dst, dystonin, [Score=855, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [RH, Score=976, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [RH, Score=572, Expect=7e-164]} {Smed: dd_Smed_v6_1205_0_11, dd_Smed_v6_1205_0_11, [Score=791, Expect=0.0]} {RNA1509_6278} {RNA1310_33.1} {RNA815_47}
2. MligTC455_32212 2136 44.51 Mlig455_012746, Mlig455_057833, Mlig455_057843

Neo: -

Age: Up-Down-Down

Region-enriched R8: 1.421/0.00123

DST 5.936 0.992 0.998 0.992 0.995 0.969 0.990

Mlig455_012746 {REF} {Length: 33009} {Pfam: Spectrin repeat [PF00435.23, score=332.1]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=101.0]; EF hand [PF00036.34, score=35.3]; EF-hand domain pair [PF13499.8, score=31.7]; EF hand [PF13202.8, score=31.1]; EF-hand domain [PF13405.8, score=30.7]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=898, Expect=0.0]} {Mouse: ENSMUSG00000026131, Dst, dystonin, [RH, Score=828, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [Score=966, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [Score=469, Expect=1e-131]} {Smed: dd_Smed_v6_1205_0_15, dd_Smed_v6_1205_0_15, [Score=757, Expect=0.0]} {RNA1509_6278} {RNA1310_33.1} {RNA815_47}

Mlig455_057833 {REF} {Length: 22108} {Pfam: Spectrin repeat [PF00435.23, score=327.8]; Growth-Arrest-Specific Protein 2 Domain [PF02187.19, score=101.5]; Plectin repeat [PF00681.22, score=49.8]; EF hand [PF00036.34, score=36.5]; EF hand [PF13202.8, score=32.3]; EF-hand domain [PF13405.8, score=32.0]; EF-hand domain pair [PF13499.8, score=27.4]} {Human: ENSG00000151914, DST, dystonin, [RH, Score=902, Expect=0.0]} {Mouse: ENSMUSG00000028649, Macf1, microtubule-actin crosslinking factor 1, [Score=875, Expect=0.0]; ENSMUSG00000026131, Dst, dystonin, [Score=847, Expect=0.0]} {Dmel: FBgn0013733, shot, short stop, [Score=954, Expect=0.0]} {Celegans: WBGene00006876, vab-10, VAB-10B protein, [RH, Score=536, Expect=1e-151]} {Smed: dd_Smed_v6_1205_0_16, dd_Smed_v6_1205_0_16, [Score=773, Expect=0.0]} {RNA1509_20864, RNA1509_6278} {RNA1310_33.1, RNA1509_20864} {RNA1509_20864, RNA815_47}

Mlig455_057843 {REF} {Length: 2887} {Pfam: Nucleoporin FG repeat region [PF13634.8, score=21.5]} {Celegans: WBGene00000033, abu-10, Activated in Blocked Unfolded protein response, [RH, Score=51.2, Expect=1e-06]} {RNA1509_20864} {RNA1310_11565} {RNA815_5243}
3. MligTC455_06845 32 0.67 Mlig455_060389

Neo: -

Age: -

0.955 - - - 0.955 - - Mlig455_060389 {REF} {Length: 566} {NoTransDecoderORF}
4. MligTC455_15956 529 11.03 Mlig455_028163

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.195

0.95 - - - - 0.950 - Mlig455_028163 {REF} {Length: 3451} {TRANSSPLICED} {Pfam: Ankyrin repeat [PF13606.8, score=30.7]; Ankyrin repeats (3 copies) [PF12796.9, score=30.0]; Ankyrin repeats (many copies) [PF13637.8, score=27.3]; Ankyrin repeat [PF00023.32, score=22.9]; Ankyrin repeats (many copies) [PF13857.8, score=19.8]} {RNA1509_12136, RNA1509_23936} {RNA1310_21816.1, RNA1509_12136, RNA1509_23936} {RNA1509_12136, RNA1509_23936, RNA815_8746}
5. MligTC455_16424 67 1.39 Mlig455_024445

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_024445 {REF} {Length: 1753} {RNA1509_36146} {RNA1310_8090.1} {RNA815_131.5}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA