Data search
Results for MligTC455_15972
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_15972 | 1384 | 28.83 | Mlig455_039304, Mlig455_054442 | Neo: - Age: - |
Mlig455_039304 {REF} {Length: 1915} {TRANSSPLICED} {RNA1509_30757} {RNA1310_1297.1, RNA1509_30757} {RNA1509_30757, RNA815_19282} Mlig455_054442 {REF} {Length: 1304} {RNA1509_20703, RNA1509_21548, RNA1509_24494} {RNA1310_59521, RNA1509_20703, RNA1509_21548, RNA1509_24494} {RNA1509_20703, RNA1509_21548, RNA1509_24494, RNA815_33498} |
Cumulative graph for MligTC455_15972
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.722 | 5.05 | 0.10949 | 0.68918 | |
| RegionR2 | 0.728 | 5.05 | 0.19178 | 0.54778 | |
| RegionR3 | 0.833 | 5.05 | 0.07545 | 0.48715 | |
| RegionR4 | -0.332 | 5.05 | 0.54793 | 0.86915 | |
| RegionR5 | 0.552 | 5.05 | 0.17667 | 0.45089 | |
| RegionR6 | 0.215 | 5.05 | 0.63028 | 1.00000 | |
| RegionR7 | -0.39 | 5.05 | 0.44693 | 1.00000 | |
| RegionR8 | 0.116 | 5.05 | 0.83807 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.438 | 5.05 | 0.35700 | 1.00000 | |
| RegenerationR2 | 0.025 | 5.05 | 0.96126 | 1.00000 | |
| RegenerationR3 | -0.043 | 5.05 | 0.93783 | 1.00000 | |
| RegenerationR4 | 0.332 | 5.05 | 0.56960 | 0.90114 | |
| RegenerationR5 | -0.436 | 5.05 | 0.40974 | 0.80532 | |
| RegenerationR6 | 0.451 | 5.05 | 0.41398 | 0.74678 | |
| RegenerationBL | 0.528 | 5.05 | 0.32849 | 0.69467 | |
| RegenerationTP | -0.378 | 5.05 | 0.55247 | 0.93491 |
Genes with expression patterns similar to MligTC455_15972
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_15972 | 1384 | 28.83 | Mlig455_039304, Mlig455_054442 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039304 {REF} {Length: 1915} {TRANSSPLICED} {RNA1509_30757} {RNA1310_1297.1, RNA1509_30757} {RNA1509_30757, RNA815_19282} Mlig455_054442 {REF} {Length: 1304} {RNA1509_20703, RNA1509_21548, RNA1509_24494} {RNA1310_59521, RNA1509_20703, RNA1509_21548, RNA1509_24494} {RNA1509_20703, RNA1509_21548, RNA1509_24494, RNA815_33498} |
|
| 2. | MligTC455_36878 | 174 | 3.63 | Mlig455_001512 | Neo: - Age: Down-Down-Up Region-enriched R4: 6.194/0.00172 |
ERG | 1.82 | - | - | - | - | 0.959 | 0.861 | Mlig455_001512 {REF} {Length: 1422} {TRANSSPLICED} {Pfam: Ets-domain [PF00178.24, score=58.3]} {Human: ENSG00000157554, ERG, ERG, ETS transcription factor, [Score=72.4, Expect=1e-13]} {Mouse: ENSMUSG00000040732, Erg, ETS transcription factor, [Score=72.0, Expect=1e-13]} {Dmel: FBgn0005658, Ets65A, Ets at 65A, [Score=70.1, Expect=1e-13]} {Celegans: WBGene00016600, ets-5, ETS class transcription factor, [Score=70.5, Expect=4e-14]} {Smed: dd_Smed_v6_28005_0_1, dd_Smed_v6_28005_0_1, [Score=70.1, Expect=1e-14]} {RNA1509_29542} {RNA1310_22139} {RNA815_5084} |
| 3. | MligTC455_19046 | 505 | 10.52 | Mlig455_051093 | Neo: Irradiation Age: - |
GSK3B | 0.963 | - | - | - | - | 0.963 | - | Mlig455_051093 {REF} {Length: 2924} {Pfam: Protein kinase domain [PF00069.27, score=225.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=91.9]; Kinase-like [PF14531.8, score=23.3]; ABC1 atypical kinase-like domain [PF03109.18, score=21.3]; Phosphotransferase enzyme family [PF01636.25, score=18.9]} {Human: ENSG00000082701, GSK3B, glycogen synthase kinase 3 beta, [Score=549, Expect=0.0]; ENSG00000105723, GSK3A, glycogen synthase kinase 3 alpha, [Score=539, Expect=0.0]} {Mouse: ENSMUSG00000022812, Gsk3b, glycogen synthase kinase 3 beta, [Score=548, Expect=0.0]; ENSMUSG00000057177, Gsk3a, glycogen synthase kinase 3 alpha, [Score=523, Expect=0.0]} {Dmel: FBgn0003371, sgg, shaggy, [Score=527, Expect=0.0]} {Celegans: WBGene00001746, gsk-3, Glycogen synthase kinase-3, [RH, Score=483, Expect=2e-171]} {Smed: dd_Smed_v6_4762_0_1, dd_Smed_v6_4762_0_1, [Score=548, Expect=0.0]} {RNA1509_18324, RNA1509_6602} {RNA1310_7142, RNA1509_18324, RNA1509_6602} {RNA1509_18324, RNA1509_6602, RNA815_3836} |
| 4. | MligTC455_30498 | 715 | 14.9 | Mlig455_030812 | Neo: - Age: - |
MYO6 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_030812 {REF} {Length: 5535} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=774.8]; Myosin VI cargo binding domain [PF16521.7, score=129.9]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.2]} {Human: ENSG00000196586, MYO6, myosin VI, [RH, Score=1394, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [RH, Score=1384, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [RH, Score=1282, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [RH, Score=1137, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [RH, Score=1296, Expect=0.0]} {RNA1509_1417} {RNA1310_883} {RNA815_546} |
| 5. | MligTC455_30497 | 700 | 14.57 | Mlig455_030772 | Neo: - Age: - Regeneration-upregulated BL: 1.590 Regeneration-enriched BL: 1.590 |
MYO6 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_030772 {REF} {Length: 5570} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=774.8]; Myosin VI cargo binding domain [PF16521.7, score=129.9]; Myosin N-terminal SH3-like domain [PF02736.21, score=30.2]} {Human: ENSG00000196586, MYO6, myosin VI, [RH, Score=1394, Expect=0.0]} {Mouse: ENSMUSG00000033577, Myo6, myosin VI, [RH, Score=1384, Expect=0.0]} {Dmel: FBgn0011225, jar, jaguar, [RH, Score=1282, Expect=0.0]} {Celegans: WBGene00004969, spe-15, [RH, Score=1137, Expect=0.0]} {Smed: dd_Smed_v6_4503_0_1, dd_Smed_v6_4503_0_1, [RH, Score=1296, Expect=0.0]} {RNA1509_1417, RNA1509_15158} {RNA1310_883, RNA1509_1417, RNA1509_15158} {RNA1509_1417, RNA1509_15158, RNA815_546} |
| 6. | MligTC455_47787 | 741 | 15.44 | Mlig455_059451 | Neo: - Age: logFC(26M/2M)=-0.505 Region-enriched R8: 1.658/0.04622 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_059451 {REF} {Length: 2112} {RNA1509_40006} {RNA1310_14082, RNA1509_40006} {RNA1509_40006, RNA815_12176} | |
| 7. | MligTC455_17898 | 95 | 1.98 | Mlig455_064691 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_064691 {REF} {Length: 481} {Pfam: DNA polymerase III tau subunit V interacting with alpha [PF12170.10, score=19.1]} | |
| 8. | MligTC455_40871 | 48 | 1 | Mlig455_050411 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_050411 {REF} {Length: 2867} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=173.2]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=227, Expect=3e-66]} {RNA1310_46466} {RNA815_48916} | |
| 9. | MligTC455_50233 | 278 | 5.79 | Mlig455_035327 | Neo: - Age: Down-Up-Down Region-enriched R6: 4.983/0.00004 |
ENTPD6 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_035327 {REF} {Length: 3364} {Pfam: GDA1/CD39 (nucleoside phosphatase) family [PF01150.19, score=135.1]} {Human: ENSG00000197586, ENTPD6, ectonucleoside triphosphate diphosphohydrolase 6 (putative), [Score=127, Expect=2e-31]; ENSG00000187097, ENTPD5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=125, Expect=1e-30]} {Mouse: ENSMUSG00000033068, Entpd6, ectonucleoside triphosphate diphosphohydrolase 6, [Score=121, Expect=3e-29]; ENSMUSG00000021236, Entpd5, ectonucleoside triphosphate diphosphohydrolase 5, [Score=120, Expect=3e-29]} {Dmel: FBgn0024947, NTPase, [Score=124, Expect=2e-30]} {Celegans: WBGene00010697, uda-1, Nucleoside-diphosphatase uda-1, [Score=99.4, Expect=4e-22]} {Smed: dd_Smed_v6_15646_0_1, dd_Smed_v6_15646_0_1, [Score=122, Expect=2e-30]} {RNA1509_6139} {RNA1310_14475.1} {RNA815_6840.1} |
Berezikov Lab - 2020-2021 © ERIBA