M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_40871

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_40871 48 1.00 Mlig455_050411

Neo: -

Age: -

 Mlig455_050411 {REF} {Length: 2867} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=173.2]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=227, Expect=3e-66]} {RNA1310_46466} {RNA815_48916}

Cumulative graph for MligTC455_40871

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.403 1.214 0.57748 1.00000
RegionR2 2.564 1.214 0.07779 0.34122
RegionR3 1.272 1.214 0.21306 0.75397
RegionR4 -2.62 1.214 0.99983 1.00000
RegionR5 -1.288 1.214 0.99316 1.00000
RegionR6 0.199 1.214 0.73210 1.00000
RegionR7 1.263 1.214 0.40627 1.00000
RegionR8 -2.794 1.214 0.48667 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -4.331 1.214 0.52547 1.00000
RegenerationR2 -2.827 1.214 0.01664 0.21118
RegenerationR3 -0.593 1.214 0.62027 0.91690
RegenerationR4 1.05 1.214 0.42208 0.82647
RegenerationR5 0.313 1.214 0.78425 0.98297
RegenerationR6 0.358 1.214 0.78810 0.97164
RegenerationBL 2.314 1.214 0.21114 0.55469
RegenerationTP -1.986 1.214 1.00000 1.00000


Genes with expression patterns similar to MligTC455_40871

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_40871 48 1 Mlig455_050411

Neo: -

Age: -

 5 1.000 1.000 1.000 - 1.000 1.000 Mlig455_050411 {REF} {Length: 2867} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=173.2]} {Smed: dd_Smed_v6_16274_0_1, dd_Smed_v6_16274_0_1, [Score=227, Expect=3e-66]} {RNA1310_46466} {RNA815_48916}
2. MligTC455_30590 30 0.62 Mlig455_041007

Neo: -

Age: Down-Down-Up

 1.798 - - - - 0.957 0.841 Mlig455_041007 {REF} {Length: 3672} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=23.5]; Mab-21 protein [PF03281.16, score=19.6]} {RNA1509_39688} {RNA1310_6142.1} {RNA815_6750.1}
3. MligTC455_18960 60 1.24 Mlig455_054452

Neo: -

Age: -

Regeneration-enriched R6: 7.163
Regeneration-enriched BL: 5.429

 1.713 - - - - 0.969 0.744 Mlig455_054452 {REF} {Length: 3779} {Pfam: Galactose binding lectin domain [PF02140.20, score=26.2]} {RNA1509_49058} {RNA1310_33725} {RNA815_48317}
4. MligTC455_12075 52 1.09 Mlig455_022141

Neo: -

Age: -

 0.984 - - 0.984 - - - Mlig455_022141 {REF} {Length: 550} {NoTransDecoderORF}
5. MligTC455_35465 191 3.97 Mlig455_031802

Neo: -

Age: -

 IRX5 0.984 - - - - 0.984 - Mlig455_031802 {REF} {Length: 1577} {Pfam: Homeobox KN domain [PF05920.13, score=57.4]; Homeodomain [PF00046.31, score=33.1]} {Human: ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.4, Expect=2e-15]; ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.4, Expect=2e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=77.0, Expect=2e-15]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=77.0, Expect=2e-15]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=2e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=3e-14]} {Mouse: ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.8, Expect=8e-16]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=9e-16]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.4, Expect=9e-16]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=77.4, Expect=1e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=1e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=1e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=84.3, Expect=4e-19]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}
6. MligTC455_52397 59 1.24 Mlig455_025356, Mlig455_025401

Neo: -

Age: Up-Down-Down

Region-enriched R2: 4.881/0.02398
Region-enriched R4: 3.564/0.00150

 PRRX1 0.975 - - - - - 0.975

Mlig455_025356 {REF} {Length: 2164} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000116132, PRRX1, paired related homeobox 1, [RH, Score=101, Expect=2e-24]; ENSG00000167157, PRRX2, paired related homeobox 2, [RH, Score=97.8, Expect=5e-23]} {Mouse: ENSMUSG00000026586, Prrx1, paired related homeobox 1, [RH, Score=101, Expect=1e-24]; ENSMUSG00000039476, Prrx2, paired related homeobox 2, [RH, Score=98.2, Expect=2e-23]} {Dmel: FBgn0034821, CG9876, [RH, Score=106, Expect=3e-26]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [Score=100, Expect=9e-24]} {Smed: dd_Smed_v6_29211_0_1, dd_Smed_v6_29211_0_1, [Score=100, Expect=2e-23]} {RNA1509_43894} {RNA1310_15380} {RNA815_19462}

Mlig455_025401 {REF} {Length: 1392} {Pfam: Homeodomain [PF00046.31, score=78.6]} {Human: ENSG00000116132, PRRX1, paired related homeobox 1, [RH, Score=101, Expect=2e-24]; ENSG00000167157, PRRX2, paired related homeobox 2, [RH, Score=97.8, Expect=4e-23]} {Mouse: ENSMUSG00000026586, Prrx1, paired related homeobox 1, [RH, Score=101, Expect=1e-24]; ENSMUSG00000039476, Prrx2, paired related homeobox 2, [RH, Score=98.2, Expect=2e-23]} {Dmel: FBgn0034821, CG9876, [RH, Score=105, Expect=3e-26]} {Celegans: WBGene00044330, alr-1, AristaLess (Drosophila homeodomain) Related, [Score=101, Expect=4e-24]} {Smed: dd_Smed_v6_29211_0_1, dd_Smed_v6_29211_0_1, [Score=99.8, Expect=1e-23]} {RNA1509_43894} {RNA1310_15380} {RNA815_19462}
7. MligTC455_41601 67 1.4 Mlig455_033111

Neo: -

Age: logFC(26M/2M)=-0.357

 ECE1 0.973 - - - - 0.973 - Mlig455_033111 {REF} {Length: 4407} {TRANSSPLICED} {Pfam: Peptidase family M13 [PF01431.23, score=220.8]; Peptidase family M13 [PF05649.15, score=194.1]} {Human: ENSG00000117298, ECE1, endothelin converting enzyme 1, [Score=400, Expect=3e-127]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=398, Expect=5e-125]; ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=398, Expect=7e-127]} {Mouse: ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [Score=396, Expect=5e-126]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=392, Expect=2e-124]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=392, Expect=1e-122]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=374, Expect=2e-117]} {Celegans: WBGene00017557, nep-11, Neprilysin-11, [Score=309, Expect=1e-92]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=328, Expect=4e-100]} {RNA1509_35151} {RNA1310_2116.1} {RNA815_5780}
8. MligTC455_12265 24 0.5 Mlig455_032250

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_032250 {REF} {Length: 497} {NoTransDecoderORF} {RNA1310_12895} {RNA815_7040}
9. MligTC455_18007 56 1.16 Mlig455_021386, Mlig455_067267

Neo: -

Age: -

 0.972 - - 0.972 - - -

Mlig455_021386 {REF} {Length: 857} {NoTransDecoderORF} {RNA815_57418}

Mlig455_067267 {REF} {Length: 775} {NoTransDecoderORF} {RNA815_57418}
10. MligTC455_37975 25 0.53 Mlig455_055324

Neo: -

Age: -

 ASAH1 0.972 - - - - 0.972 - Mlig455_055324 {REF} {Length: 1369} {TRANSSPLICED} {Pfam: Linear amide C-N hydrolases, choloylglycine hydrolase family [PF02275.20, score=84.4]} {Human: ENSG00000104763, ASAH1, N-acylsphingosine amidohydrolase 1, [Score=329, Expect=2e-111]} {Mouse: ENSMUSG00000031591, Asah1, N-acylsphingosine amidohydrolase 1, [Score=318, Expect=2e-106]} {Celegans: WBGene00010769, asah-1, Acid ceramidase, [Score=257, Expect=1e-82]} {RNA1509_25332} {RNA1310_24069.1} {RNA815_9637.1}
11. MligTC455_09620 47 0.98 Mlig455_051588, Mlig455_051621

Neo: -

Age: Down-Up-Down

 0.97 - - 0.970 - - -

Mlig455_051588 {REF} {Length: 2384} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=23.0]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109}

Mlig455_051621 {REF} {Length: 2226} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=24.9]} {RNA1509_58091} {RNA1310_22874} {RNA815_11109}
12. MligTC455_44704 104 2.17 Mlig455_050401

Neo: -

Age: -

Region-enriched R4: 2.979/0.04664

 MLF2 0.969 - - - - - 0.969 Mlig455_050401 {REF} {Length: 1827} {Pfam: Myelodysplasia-myeloid leukemia factor 1-interacting protein [PF10248.11, score=119.0]} {Human: ENSG00000089693, MLF2, myeloid leukemia factor 2, [Score=87.8, Expect=8e-20]} {Mouse: ENSMUSG00000048416, Mlf1, myeloid leukemia factor 1, [Score=92.0, Expect=3e-21]; ENSMUSG00000030120, Mlf2, myeloid leukemia factor 2, [Score=88.6, Expect=3e-20]} {Dmel: FBgn0034051, Mlf, Myelodysplasia/myeloid leukemia factor, [Score=89.7, Expect=1e-20]} {Smed: dd_Smed_v6_4787_0_1, dd_Smed_v6_4787_0_1, [Score=100, Expect=4e-25]} {RNA1509_25069, RNA1509_57570} {RNA1310_19505, RNA1509_25069, RNA1509_57570} {RNA1509_25069, RNA1509_57570, RNA815_19430}
13. MligTC455_24828 185 3.85 Mlig455_017886

Neo: -

Age: -

 ADPRHL2 0.965 - - - - 0.965 - Mlig455_017886 {REF} {Length: 2559} {TRANSSPLICED} {Pfam: ADP-ribosylglycohydrolase [PF03747.16, score=159.0]} {Human: ENSG00000116863, ADPRHL2, ADP-ribosylhydrolase like 2, [RH, Score=183, Expect=7e-54]} {Mouse: ENSMUSG00000042558, Adprhl2, ADP-ribosylhydrolase like 2, [RH, Score=184, Expect=2e-54]} {RNA1509_24320, RNA1509_51846, RNA1509_7861} {RNA1310_12044.2, RNA1509_51846, RNA1509_7861} {RNA1509_51846, RNA1509_7861, RNA815_33135}
14. MligTC455_12217 33 0.68 Mlig455_068732

Neo: -

Age: Down-Up-Up

 0.964 - - - - 0.964 - Mlig455_068732 {REF} {Length: 3365} {Pfam: High molecular weight glutenin subunit [PF03157.15, score=22.1]} {RNA1310_29196.2} {RNA815_33399}
15. MligTC455_44031 16 0.33 Mlig455_018450

Neo: -

Age: -

 0.963 - - 0.963 - - - Mlig455_018450 {REF} {Length: 381} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_80775} {RNA815_15576}
16. MligTC455_54019 59 1.23 Mlig455_050979

Neo: -

Age: logFC(26M/2M)=0.902

 DEGS2 0.963 - - 0.963 - - - Mlig455_050979 {REF} {Length: 2343} {Pfam: Fatty acid desaturase [PF00487.26, score=84.5]; Sphingolipid Delta4-desaturase (DES) [PF08557.12, score=59.9]} {Human: ENSG00000168350, DEGS2, delta 4-desaturase, sphingolipid 2, [Score=332, Expect=1e-111]} {Mouse: ENSMUSG00000021263, Degs2, delta(4)-desaturase, sphingolipid 2, [Score=320, Expect=3e-107]; ENSMUSG00000038633, Degs1, delta(4)-desaturase, sphingolipid 1, [Score=304, Expect=8e-101]} {Dmel: FBgn0001941, ifc, infertile crescent, [Score=354, Expect=1e-120]} {Celegans: WBGene00013197, ttm-5, Putative sphingolipid delta(4)-desaturase/C4-monooxygenase, [Score=325, Expect=1e-108]} {Smed: dd_Smed_v6_7414_0_1, dd_Smed_v6_7414_0_1, [RH, Score=422, Expect=6e-147]} {RNA1509_11966, RNA1509_33417, RNA1509_59878} {RNA1310_11518, RNA1509_11966, RNA1509_33417, RNA1509_59878} {RNA1509_11966, RNA1509_33417, RNA1509_59878, RNA815_6718}
17. MligTC455_54036 254 5.29 Mlig455_048173, Mlig455_048196

Neo: -

Age: logFC(26M/2M)=1.000

Region-enriched R8: 3.438/0.03106

 CALML3 0.963 - - 0.963 - - -

Mlig455_048173 {REF} {Length: 1339} {Pfam: EF hand [PF00036.34, score=85.0]; EF-hand domain pair [PF13499.8, score=75.7]; EF hand [PF13202.8, score=68.3]; EF-hand domain [PF13405.8, score=67.2]; EF-hand domain pair [PF13833.8, score=55.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.5]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=83.2, Expect=1e-20]; ENSG00000143933, CALM2, calmodulin 2, [Score=80.1, Expect=2e-19]; ENSG00000160014, CALM3, calmodulin 3, [Score=80.1, Expect=2e-19]; ENSG00000198668, CALM1, calmodulin 1, [Score=80.1, Expect=2e-19]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=81.6, Expect=3e-20]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=80.1, Expect=1e-19]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=80.1, Expect=1e-19]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=80.1, Expect=1e-19]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=77.8, Expect=6e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=77.8, Expect=5e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=77.8, Expect=4e-19]} {RNA1509_44750} {RNA1310_63281} {RNA815_19875}

Mlig455_048196 {REF} {Length: 1514} {Pfam: EF hand [PF00036.34, score=85.0]; EF-hand domain pair [PF13499.8, score=75.7]; EF hand [PF13202.8, score=68.3]; EF-hand domain [PF13405.8, score=67.2]; EF-hand domain pair [PF13833.8, score=55.1]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=19.5]} {Human: ENSG00000178363, CALML3, calmodulin like 3, [Score=83.2, Expect=1e-20]; ENSG00000143933, CALM2, calmodulin 2, [Score=80.1, Expect=2e-19]; ENSG00000160014, CALM3, calmodulin 3, [Score=80.1, Expect=2e-19]; ENSG00000198668, CALM1, calmodulin 1, [Score=80.1, Expect=2e-19]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=81.6, Expect=3e-20]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=80.1, Expect=1e-19]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=80.1, Expect=1e-19]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=80.1, Expect=1e-19]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=77.8, Expect=6e-19]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=77.8, Expect=5e-19]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=77.8, Expect=4e-19]} {RNA1509_44750} {RNA1310_63281, RNA1509_44750} {RNA1509_44750, RNA815_19875}
18. MligTC455_35375 97 2.02 Mlig455_000108, Mlig455_056118, Mlig455_056902, Mlig455_061600, Mlig455_066534

Neo: -

Age: -

 0.962 - - 0.962 - - -

Mlig455_000108 {REF} {Length: 627} {NoTransDecoderORF} {RNA1509_47429} {RNA1310_22662.1} {RNA815_42886}

Mlig455_056118 {REF} {Length: 627} {NoTransDecoderORF} {RNA1509_47429} {RNA1310_22662.1} {RNA815_42886}

Mlig455_056902 {REF} {Length: 628} {NoTransDecoderORF} {RNA1509_47429} {RNA1310_22662.1} {RNA815_42886}

Mlig455_061600 {REF} {Length: 823} {NoTransDecoderORF} {RNA1509_47429} {RNA1310_22662.1} {RNA815_42886}

Mlig455_066534 {REF} {Length: 672} {NoTransDecoderORF} {RNA1509_47429} {RNA1310_22662.1} {RNA815_42886}
19. MligTC455_13986 12 0.25 Mlig455_025214

Neo: -

Age: -

 IRX5 0.96 - - 0.960 - - - Mlig455_025214 {REF} {Length: 2473} {Pfam: Homeobox KN domain [PF05920.13, score=56.2]; Homeodomain [PF00046.31, score=31.8]} {Human: ENSG00000176842, IRX5, iroquois homeobox 5, [Score=139, Expect=6e-37]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=135, Expect=6e-36]} {Mouse: ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=136, Expect=5e-36]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=135, Expect=8e-36]; ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=130, Expect=1e-33]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=130, Expect=4e-34]; ENSMUSG00000031734, Irx3, Iroquois related homeobox 3, [Score=130, Expect=6e-34]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=130, Expect=9e-34]} {Dmel: FBgn0015904, ara, araucan, [Score=133, Expect=2e-34]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=111, Expect=9e-28]} {Smed: dd_Smed_v6_17352_0_1, dd_Smed_v6_17352_0_1, [Score=148, Expect=2e-41]} {RNA1310_51494.1} {RNA815_48813}
20. MligTC455_19124 68 1.41 Mlig455_056714

Neo: -

Age: Up-Down-Up

 NPFFR1 0.96 - - 0.960 - - - Mlig455_056714 {REF} {Length: 3702} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=113.2]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=23.3]} {Human: ENSG00000148734, NPFFR1, neuropeptide FF receptor 1, [Score=90.1, Expect=1e-18]; ENSG00000137252, HCRTR2, hypocretin receptor 2, [Score=87.8, Expect=6e-18]} {Mouse: ENSMUSG00000038071, Npy6r, neuropeptide Y receptor Y6, [Score=105, Expect=2e-24]} {Dmel: FBgn0037408, NPFR, Neuropeptide F receptor, [Score=131, Expect=7e-33]} {Celegans: WBGene00003808, npr-2, NeuroPeptide Receptor family, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_26109_0_1, dd_Smed_v6_26109_0_1, [RH, Score=210, Expect=4e-61]} {RNA1509_34547} {RNA1310_9062, RNA1509_34547} {RNA1509_34547, RNA815_6805}
21. MligTC455_21781 18 0.37 Mlig455_000405, Mlig455_000474

Neo: -

Age: Up-Up-Down

 0.96 - - 0.960 - - -

Mlig455_000405 {REF} {Length: 4189} {Pfam: Pao retrotransposon peptidase [PF05380.15, score=109.0]; Integrase zinc binding domain [PF17921.3, score=33.8]} {Smed: dd_Smed_v6_17391_0_1, dd_Smed_v6_17391_0_1, [RH, Score=57.4, Expect=3e-10]} {RNA1509_53267} {RNA1310_6178} {RNA815_31262}

Mlig455_000474 {REF} {Length: 1522} {Pfam: Family of unknown function (DUF5641) [PF18701.3, score=112.0]} {Smed: dd_Smed_v6_22202_0_1, dd_Smed_v6_22202_0_1, [Score=105, Expect=2e-28]} {RNA1310_18148.2} {RNA815_46086}
22. MligTC455_21789 52 1.07 Mlig455_032584

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_032584 {REF} {Length: 1578} {Pfam: Integrase zinc binding domain [PF17921.3, score=54.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=34.1]; Integrase core domain [PF00665.28, score=29.0]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=124, Expect=8e-31]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}
23. MligTC455_33398 81 1.69 Mlig455_055951

Neo: -

Age: -

 DNAH1 0.959 - - - - 0.959 - Mlig455_055951 {REF} {Length: 4095} {Pfam: Dynein heavy chain C-terminal domain [PF18199.3, score=386.6]; ATP-binding dynein motor region [PF12781.9, score=248.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=157.0]; Dynein heavy chain AAA lid domain [PF18198.3, score=133.4]; Microtubule-binding stalk of dynein motor [PF12777.9, score=24.0]; Crescentin protein [PF19220.2, score=18.5]} {Human: ENSG00000114841, DNAH1, dynein axonemal heavy chain 1, [Score=1466, Expect=0.0]} {Mouse: ENSMUSG00000019027, Dnah1, dynein, axonemal, heavy chain 1, [Score=1456, Expect=0.0]} {Dmel: FBgn0013810, Dhc36C, Dynein heavy chain at 36C, [Score=930, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=283, Expect=5e-78]} {Smed: dd_Smed_v6_6790_0_1, dd_Smed_v6_6790_0_1, [Score=1530, Expect=0.0]} {RNA1509_1216} {RNA1310_62} {RNA815_116.1}
24. MligTC455_19642 697 14.51 Mlig455_008581

Neo: -

Age: -

 CDKAL1 0.958 - - - - 0.958 - Mlig455_008581 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: Uncharacterized protein family UPF0004 [PF00919.22, score=70.7]; Radical SAM superfamily [PF04055.23, score=52.5]; TRAM domain [PF01938.22, score=22.3]} {Human: ENSG00000145996, CDKAL1, CDK5 regulatory subunit associated protein 1 like 1, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000006191, Cdkal1, CDK5 regulatory subunit associated protein 1-like 1, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0034214, CG6550, [RH, Score=594, Expect=0.0]} {Celegans: WBGene00022363, Y92H12BL.1, Threonylcarbamoyladenosine tRNA methylthiotransferase, [RH, Score=389, Expect=5e-131]} {Smed: dd_Smed_v6_2358_0_1, dd_Smed_v6_2358_0_1, [RH, Score=558, Expect=0.0]} {RNA1509_38379, RNA1509_55471, RNA1509_8176} {RNA1310_6972.2, RNA1509_38379, RNA1509_55471, RNA1509_8176} {RNA1509_38379, RNA1509_55471, RNA1509_8176, RNA815_7659}
25. MligTC455_44068 47 0.99 Mlig455_063671

Neo: -

Age: -

 THRA 0.957 - - - - 0.957 - Mlig455_063671 {REF} {Length: 4986} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=106.0]; Ligand-binding domain of nuclear hormone receptor [PF00104.32, score=63.6]} {Human: ENSG00000126351, THRA, thyroid hormone receptor alpha, [Score=170, Expect=4e-45]} {Mouse: ENSMUSG00000058756, Thra, thyroid hormone receptor alpha, [Score=173, Expect=5e-46]} {Dmel: FBgn0000546, EcR, Ecdysone receptor, [Score=172, Expect=4e-44]} {Celegans: WBGene00003613, nhr-14, Nuclear hormone receptor family member nhr-14, [Score=110, Expect=2e-25]} {Smed: dd_Smed_v6_3012_0_1, dd_Smed_v6_3012_0_1, [Score=194, Expect=7e-52]} {RNA1509_27629} {RNA1310_74061} {RNA815_54074}
26. MligTC455_24768 192 4.01 Mlig455_067990

Neo: -

Age: -

 ZNF521 0.956 - - - - 0.956 - Mlig455_067990 {REF} {Length: 3203} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=31.0]; Zinc finger, C2H2 type [PF00096.28, score=25.2]} {Human: ENSG00000198795, ZNF521, zinc finger protein 521, [Score=49.7, Expect=1e-05]; ENSG00000100105, PATZ1, POZ/BTB and AT hook containing zinc finger 1, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000024420, Zfp521, zinc finger protein 521, [Score=49.3, Expect=1e-05]; ENSMUSG00000020453, Patz1, POZ (BTB) and AT hook containing zinc finger 1, [Score=49.3, Expect=8e-06]} {RNA1509_16225, RNA1509_55562} {RNA1310_1264.1, RNA1509_55562} {RNA1509_55562, RNA815_3978.1}
27. MligTC455_40364 19 0.4 Mlig455_038354

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_038354 {REF} {Length: 2608} {RNA1509_57598} {RNA1310_48414} {RNA815_41099}
28. MligTC455_05691 75 1.56 Mlig455_029638

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_029638 {REF} {Length: 772} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_22348} {RNA1310_19581, RNA1509_22348} {RNA1509_22348, RNA815_8950}
29. MligTC455_54102 228 4.75 Mlig455_012249, Mlig455_012262, Mlig455_052497

Neo: -

Age: logFC(26M/2M)=0.459

Region-enriched R5: 3.431/0.00196

 0.955 - - - - 0.955 -

Mlig455_012249 {REF} {Length: 1454} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834}

Mlig455_012262 {REF} {Length: 1597} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834}

Mlig455_052497 {REF} {Length: 1723} {TRANSSPLICED} {RNA1310_29892} {RNA815_39834}
30. MligTC455_54778 10 0.21 Mlig455_052270

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_052270 {REF} {Length: 25} {TRANSSPLICED} {NoTransDecoderORF}
31. MligTC455_01303 33 0.68 Mlig455_052382, Mlig455_062606, Mlig455_064134

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_052382 {REF} {Length: 238} {NoTransDecoderORF} {RNA1310_24659} {RNA815_41866}

Mlig455_062606 {REF} {Length: 505} {NoTransDecoderORF} {RNA1310_24659} {RNA815_41866}

Mlig455_064134 {REF} {Length: 625} {NoTransDecoderORF} {RNA1310_24659} {RNA815_41866}
32. MligTC455_15972 1384 28.83 Mlig455_039304, Mlig455_054442

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_039304 {REF} {Length: 1915} {TRANSSPLICED} {RNA1509_30757} {RNA1310_1297.1, RNA1509_30757} {RNA1509_30757, RNA815_19282}

Mlig455_054442 {REF} {Length: 1304} {RNA1509_20703, RNA1509_21548, RNA1509_24494} {RNA1310_59521, RNA1509_20703, RNA1509_21548, RNA1509_24494} {RNA1509_20703, RNA1509_21548, RNA1509_24494, RNA815_33498}
33. MligTC455_03823 83 1.73 Mlig455_035130, Mlig455_035135

Neo: -

Age: -

 0.952 - - - - 0.952 -

Mlig455_035130 {REF} {Length: 1005} {RNA1310_33717} {RNA815_20534}

Mlig455_035135 {REF} {Length: 1062} {RNA1310_33717} {RNA815_20534}
34. MligTC455_39829 112 2.34 Mlig455_015928

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.786

 SVOP 0.952 - - - - 0.952 - Mlig455_015928 {REF} {Length: 4798} {Pfam: Sugar (and other) transporter [PF00083.26, score=137.1]; Major Facilitator Superfamily [PF07690.18, score=130.4]} {Human: ENSG00000166111, SVOP, SV2 related protein, [Score=134, Expect=3e-32]} {Mouse: ENSMUSG00000042078, Svop, SV2 related protein, [Score=120, Expect=8e-28]} {Dmel: FBgn0034956, CG4324, [Score=127, Expect=1e-30]} {Celegans: WBGene00014021, svop-1, Putative transporter svop-1, [Score=138, Expect=3e-34]} {Smed: dd_Smed_v6_3645_0_1, dd_Smed_v6_3645_0_1, [Score=178, Expect=4e-48]} {RNA1509_47157} {RNA1310_47802} {RNA815_44733}
35. MligTC455_20332 34 0.71 Mlig455_038515

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_038515 {REF} {Length: 2092} {RNA1509_52468} {RNA1310_41235} {RNA815_11414.1}
36. MligTC455_40686 55 1.14 Mlig455_066331

Neo: -

Age: -

 0.951 - - 0.951 - - - Mlig455_066331 {REF} {Length: 557} {RNA1509_41547} {RNA1310_104300} {RNA815_38127.2}
37. MligTC455_53510 405 8.43 Mlig455_039941

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.005/0.01946
Region-enriched R7: 2.875/0.00224

 KREMEN1 0.951 - - - - 0.951 - Mlig455_039941 {REF} {Length: 4661} {Pfam: WSC domain [PF01822.21, score=619.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=66.6, Expect=2e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=63.9, Expect=9e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=71.2, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.0, Expect=3e-06]} {RNA1509_15008} {RNA1310_5799, RNA1509_15008} {RNA1509_15008, RNA815_22574}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA