Data search


search
Exact
Search

Results for MligTC455_16035

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16035 516 10.74 Mlig455_049668

Neo: -

Age: -

Mlig455_049668 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_58694} {RNA1310_1938} {RNA815_560}

Cumulative graph for MligTC455_16035

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.036 3.687 0.09429 0.65652
RegionR2 0.69 3.687 0.27266 0.65741
RegionR3 0.26 3.687 0.63286 1.00000
RegionR4 -0.41 3.687 0.53948 0.86215
RegionR5 0.054 3.687 0.91207 1.00000
RegionR6 0.938 3.687 0.07405 0.50564
RegionR7 0.358 3.687 0.59786 1.00000
RegionR8 1.146 3.687 0.12019 0.63828

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.074 3.687 0.98610 1.00000
RegenerationR2 -0.162 3.687 0.74509 0.97163
RegenerationR3 0.267 3.687 0.62907 0.91992
RegenerationR4 0.367 3.687 0.50705 0.87304
RegenerationR5 0.59 3.687 0.26101 0.69234
RegenerationR6 -0.373 3.687 0.48018 0.79184
RegenerationBL -0.096 3.687 0.86849 1.00000
RegenerationTP -1.046 3.687 0.14291 0.56372


Genes with expression patterns similar to MligTC455_16035

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16035 516 10.74 Mlig455_049668

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_049668 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_58694} {RNA1310_1938} {RNA815_560}
2. MligTC455_16036 1121 23.36 Mlig455_018160, Mlig455_052815

Neo: -

Age: -

TET2, TET3 5.914 0.989 0.955 0.999 0.998 0.995 0.978

Mlig455_018160 {REF} {Length: 4593} {Pfam: Oxygenase domain of the 2OGFeDO superfamily [PF12851.9, score=118.5]} {Human: ENSG00000168769, TET2, tet methylcytosine dioxygenase 2, [RH, Score=281, Expect=1e-82]; ENSG00000138336, TET1, tet methylcytosine dioxygenase 1, [RH, Score=275, Expect=4e-80]} {Mouse: ENSMUSG00000034832, Tet3, tet methylcytosine dioxygenase 3, [Score=283, Expect=3e-83]; ENSMUSG00000047146, Tet1, tet methylcytosine dioxygenase 1, [Score=271, Expect=3e-79]} {Dmel: FBgn0263392, Tet, Ten-Eleven Translocation (TET) family protein, [Score=265, Expect=5e-77]} {RNA1509_8276} {RNA1310_1938} {RNA815_560}

Mlig455_052815 {REF} {Length: 4836} {Pfam: Oxygenase domain of the 2OGFeDO superfamily [PF12851.9, score=194.4]} {Human: ENSG00000187605, TET3, tet methylcytosine dioxygenase 3, [RH, Score=296, Expect=2e-83]; ENSG00000138336, TET1, tet methylcytosine dioxygenase 1, [RH, Score=288, Expect=2e-80]} {Mouse: ENSMUSG00000034832, Tet3, tet methylcytosine dioxygenase 3, [RH, Score=300, Expect=9e-85]; ENSMUSG00000047146, Tet1, tet methylcytosine dioxygenase 1, [RH, Score=291, Expect=5e-82]} {Dmel: FBgn0263392, Tet, Ten-Eleven Translocation (TET) family protein, [RH, Score=294, Expect=6e-83]} {RNA1509_20008, RNA1509_58694, RNA1509_8276} {RNA1310_1938, RNA1509_20008, RNA1509_58694, RNA1509_8276} {RNA1509_20008, RNA1509_58694, RNA1509_8276, RNA815_560}
3. MligTC455_27927 110 2.29 Mlig455_047594, Mlig455_067424

Neo: -

Age: -

0.98 - - - - 0.980 -

Mlig455_047594 {REF} {Length: 233} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452}

Mlig455_067424 {REF} {Length: 2126} {RNA1509_6383} {RNA1310_17474} {RNA815_9083}
4. MligTC455_27956 372 7.75 Mlig455_001348, Mlig455_004814, Mlig455_017672, Mlig455_039228, Mlig455_046389, Mlig455_061106, Mlig455_061554

Neo: -

Age: Down-Up-Down

0.964 - - - - 0.964 -

Mlig455_001348 {REF} {Length: 109} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_34957}

Mlig455_004814 {REF} {Length: 1314} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_17474} {RNA815_34916}

Mlig455_017672 {REF} {Length: 189} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452}

Mlig455_039228 {REF} {Length: 370} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_47679} {RNA815_42452}

Mlig455_046389 {REF} {Length: 206} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452}

Mlig455_061106 {REF} {Length: 529} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_4200.3}

Mlig455_061554 {REF} {Length: 861} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452}
5. MligTC455_23518 320 6.68 Mlig455_026110, Mlig455_026156, Mlig455_026157

Neo: -

Age: Down-Up-Down

DOLPP1 0.962 - - - - 0.962 -

Mlig455_026110 {REF} {Length: 2151} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=63.4]} {Human: ENSG00000167130, DOLPP1, dolichyldiphosphatase 1, [RH, Score=196, Expect=1e-62]} {Mouse: ENSMUSG00000026856, Dolpp1, dolichyl pyrophosphate phosphatase 1, [RH, Score=195, Expect=2e-62]} {Smed: dd_Smed_v6_6607_0_1, dd_Smed_v6_6607_0_1, [RH, Score=164, Expect=1e-50]} {RNA1509_31269} {RNA1310_19344} {RNA815_4895}

Mlig455_026156 {REF} {Length: 1851} {Pfam: PAP2 superfamily [PF01569.23, score=51.2]} {Human: ENSG00000167130, DOLPP1, dolichyldiphosphatase 1, [Score=117, Expect=6e-33]} {Mouse: ENSMUSG00000026856, Dolpp1, dolichyl pyrophosphate phosphatase 1, [RH, Score=113, Expect=1e-32]} {Smed: dd_Smed_v6_6607_0_1, dd_Smed_v6_6607_0_1, [Score=119, Expect=2e-34]} {RNA1509_31269} {RNA1310_19344} {RNA815_4895}

Mlig455_026157 {REF} {Length: 366} {TRANSSPLICED} {Human: ENSG00000167130, DOLPP1, dolichyldiphosphatase 1, [Score=61.6, Expect=3e-13]} {Mouse: ENSMUSG00000026856, Dolpp1, dolichyl pyrophosphate phosphatase 1, [Score=62.8, Expect=8e-14]} {Smed: dd_Smed_v6_6607_0_1, dd_Smed_v6_6607_0_1, [Score=51.2, Expect=1e-09]} {RNA1509_31269} {RNA1310_21753} {RNA815_4895}
6. MligTC455_52630 210 4.38 Mlig455_059648

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.566

0.956 - - 0.956 - - - Mlig455_059648 {REF} {Length: 2642} {Pfam: Otopetrin [PF03189.15, score=47.3]} {RNA1509_23358} {RNA1310_13045} {RNA815_9581}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA