Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_16036 | 1121 | 23.36 | Mlig455_018160, Mlig455_052815 | Neo: - Age: - |
TET2, TET3 | Mlig455_018160 {REF} {Length: 4593} {Pfam: Oxygenase domain of the 2OGFeDO superfamily [PF12851.9, score=118.5]} {Human: ENSG00000168769, TET2, tet methylcytosine dioxygenase 2, [RH, Score=281, Expect=1e-82]; ENSG00000138336, TET1, tet methylcytosine dioxygenase 1, [RH, Score=275, Expect=4e-80]} {Mouse: ENSMUSG00000034832, Tet3, tet methylcytosine dioxygenase 3, [Score=283, Expect=3e-83]; ENSMUSG00000047146, Tet1, tet methylcytosine dioxygenase 1, [Score=271, Expect=3e-79]} {Dmel: FBgn0263392, Tet, Ten-Eleven Translocation (TET) family protein, [Score=265, Expect=5e-77]} {RNA1509_8276} {RNA1310_1938} {RNA815_560} Mlig455_052815 {REF} {Length: 4836} {Pfam: Oxygenase domain of the 2OGFeDO superfamily [PF12851.9, score=194.4]} {Human: ENSG00000187605, TET3, tet methylcytosine dioxygenase 3, [RH, Score=296, Expect=2e-83]; ENSG00000138336, TET1, tet methylcytosine dioxygenase 1, [RH, Score=288, Expect=2e-80]} {Mouse: ENSMUSG00000034832, Tet3, tet methylcytosine dioxygenase 3, [RH, Score=300, Expect=9e-85]; ENSMUSG00000047146, Tet1, tet methylcytosine dioxygenase 1, [RH, Score=291, Expect=5e-82]} {Dmel: FBgn0263392, Tet, Ten-Eleven Translocation (TET) family protein, [RH, Score=294, Expect=6e-83]} {RNA1509_20008, RNA1509_58694, RNA1509_8276} {RNA1310_1938, RNA1509_20008, RNA1509_58694, RNA1509_8276} {RNA1509_20008, RNA1509_58694, RNA1509_8276, RNA815_560} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -3.009 | 4.714 | 0.03372 | 0.46155 | |
RegionR2 | 0.708 | 4.714 | 0.24006 | 0.61472 | |
RegionR3 | 0.049 | 4.714 | 0.92219 | 1.00000 | |
RegionR4 | -0.386 | 4.714 | 0.53841 | 0.86127 | |
RegionR5 | -0.101 | 4.714 | 0.85171 | 1.00000 | |
RegionR6 | 0.804 | 4.714 | 0.11664 | 0.62294 | |
RegionR7 | 0.631 | 4.714 | 0.26432 | 0.89434 | |
RegionR8 | 1.304 | 4.714 | 0.03431 | 0.36371 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -0.021 | 4.714 | 0.99510 | 1.00000 | |
RegenerationR2 | -0.214 | 4.714 | 0.71049 | 0.96014 | |
RegenerationR3 | 0.451 | 4.714 | 0.46272 | 0.83947 | |
RegenerationR4 | 0.434 | 4.714 | 0.48612 | 0.86193 | |
RegenerationR5 | 0.871 | 4.714 | 0.14139 | 0.55473 | |
RegenerationR6 | -0.263 | 4.714 | 0.65054 | 0.89894 | |
RegenerationBL | -0.073 | 4.714 | 0.89747 | 1.00000 | |
RegenerationTP | -1.192 | 4.714 | 0.07242 | 0.43120 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_16036 | 1121 | 23.36 | Mlig455_018160, Mlig455_052815 | Neo: - Age: - |
TET2, TET3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018160 {REF} {Length: 4593} {Pfam: Oxygenase domain of the 2OGFeDO superfamily [PF12851.9, score=118.5]} {Human: ENSG00000168769, TET2, tet methylcytosine dioxygenase 2, [RH, Score=281, Expect=1e-82]; ENSG00000138336, TET1, tet methylcytosine dioxygenase 1, [RH, Score=275, Expect=4e-80]} {Mouse: ENSMUSG00000034832, Tet3, tet methylcytosine dioxygenase 3, [Score=283, Expect=3e-83]; ENSMUSG00000047146, Tet1, tet methylcytosine dioxygenase 1, [Score=271, Expect=3e-79]} {Dmel: FBgn0263392, Tet, Ten-Eleven Translocation (TET) family protein, [Score=265, Expect=5e-77]} {RNA1509_8276} {RNA1310_1938} {RNA815_560} Mlig455_052815 {REF} {Length: 4836} {Pfam: Oxygenase domain of the 2OGFeDO superfamily [PF12851.9, score=194.4]} {Human: ENSG00000187605, TET3, tet methylcytosine dioxygenase 3, [RH, Score=296, Expect=2e-83]; ENSG00000138336, TET1, tet methylcytosine dioxygenase 1, [RH, Score=288, Expect=2e-80]} {Mouse: ENSMUSG00000034832, Tet3, tet methylcytosine dioxygenase 3, [RH, Score=300, Expect=9e-85]; ENSMUSG00000047146, Tet1, tet methylcytosine dioxygenase 1, [RH, Score=291, Expect=5e-82]} {Dmel: FBgn0263392, Tet, Ten-Eleven Translocation (TET) family protein, [RH, Score=294, Expect=6e-83]} {RNA1509_20008, RNA1509_58694, RNA1509_8276} {RNA1310_1938, RNA1509_20008, RNA1509_58694, RNA1509_8276} {RNA1509_20008, RNA1509_58694, RNA1509_8276, RNA815_560} |
2. | MligTC455_16035 | 516 | 10.74 | Mlig455_049668 | Neo: - Age: - |
5.914 | 0.989 | 0.955 | 0.999 | 0.998 | 0.995 | 0.978 | Mlig455_049668 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_58694} {RNA1310_1938} {RNA815_560} | |
3. | MligTC455_33712 | 444 | 9.24 | Mlig455_024601 | Neo: - Age: - |
BRAF | 1.741 | - | - | - | - | 0.779 | 0.962 | Mlig455_024601 {REF} {Length: 4091} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=190.6]; Protein kinase domain [PF00069.27, score=172.0]; Raf-like Ras-binding domain [PF02196.17, score=52.2]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=24.1]; Phosphotransferase enzyme family [PF01636.25, score=22.3]; Fungal protein kinase [PF17667.3, score=19.8]} {Human: ENSG00000157764, BRAF, B-Raf proto-oncogene, serine/threonine kinase, [Score=382, Expect=3e-121]; ENSG00000132155, RAF1, Raf-1 proto-oncogene, serine/threonine kinase, [Score=365, Expect=9e-118]} {Mouse: ENSMUSG00000002413, Braf, Braf transforming gene, [Score=381, Expect=2e-121]; ENSMUSG00000000441, Raf1, v-raf-leukemia viral oncogene 1, [Score=368, Expect=1e-117]} {Dmel: FBgn0003079, Raf, Raf oncogene, [RH, Score=373, Expect=1e-118]} {Celegans: WBGene00003030, lin-45, Raf homolog serine/threonine-protein kinase, [RH, Score=326, Expect=5e-100]} {Smed: dd_Smed_v6_10148_0_1, dd_Smed_v6_10148_0_1, [RH, Score=375, Expect=2e-119]} {RNA1509_20080} {RNA1310_8500, RNA1509_20080} {RNA1509_20080, RNA815_9141} |
4. | MligTC455_32775 | 1594 | 33.21 | Mlig455_035139, Mlig455_035144 | Neo: - Age: - Region-enriched R7: 1.127/0.04960 |
INSRR | 1.657 | - | - | - | - | 0.707 | 0.950 | Mlig455_035139 {REF} {Length: 5524} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=199.4]; Protein kinase domain [PF00069.27, score=81.2]; Furin-like cysteine rich region [PF00757.22, score=77.0]; Receptor L domain [PF01030.26, score=56.3]; Fibronectin type III domain [PF00041.23, score=35.6]} {Human: ENSG00000027644, INSRR, insulin receptor related receptor, [Score=317, Expect=3e-88]} {Mouse: ENSMUSG00000005640, Insrr, insulin receptor-related receptor, [Score=306, Expect=6e-85]; ENSMUSG00000005534, Insr, insulin receptor, [Score=303, Expect=1e-83]} {Dmel: FBgn0283499, InR, Insulin-like receptor, [Score=273, Expect=2e-73]} {Celegans: WBGene00000898, daf-2, Insulin-like receptor Insulin-like receptor subunit alpha Insulin-like receptor subunit beta, [RH, Score=327, Expect=7e-91]} {Smed: dd_Smed_v6_9006_0_2, dd_Smed_v6_9006_0_2, [Score=233, Expect=1e-64]} {RNA1509_3196} {RNA1310_14505} {RNA815_1304.1} Mlig455_035144 {REF} {Length: 7383} {tRNA: Val(CAC),pseudo, score=22.9} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=281.0]; Protein kinase domain [PF00069.27, score=125.7]; Fibronectin type III domain [PF00041.23, score=39.2]} {Human: ENSG00000027644, INSRR, insulin receptor related receptor, [RH, Score=388, Expect=4e-118]} {Mouse: ENSMUSG00000005640, Insrr, insulin receptor-related receptor, [RH, Score=392, Expect=1e-119]} {Dmel: FBgn0283499, InR, Insulin-like receptor, [RH, Score=332, Expect=1e-96]} {Celegans: WBGene00000898, daf-2, Insulin-like receptor Insulin-like receptor subunit alpha Insulin-like receptor subunit beta, [Score=287, Expect=8e-82]} {Smed: dd_Smed_v6_9006_0_1, dd_Smed_v6_9006_0_1, [Score=317, Expect=1e-92]} {RNA1509_37165} {RNA1310_4466} {RNA815_3939} |
5. | MligTC455_23518 | 320 | 6.68 | Mlig455_026110, Mlig455_026156, Mlig455_026157 | Neo: - Age: Down-Up-Down |
DOLPP1 | 0.981 | - | - | - | - | 0.981 | - | Mlig455_026110 {REF} {Length: 2151} {TRANSSPLICED} {Pfam: PAP2 superfamily [PF01569.23, score=63.4]} {Human: ENSG00000167130, DOLPP1, dolichyldiphosphatase 1, [RH, Score=196, Expect=1e-62]} {Mouse: ENSMUSG00000026856, Dolpp1, dolichyl pyrophosphate phosphatase 1, [RH, Score=195, Expect=2e-62]} {Smed: dd_Smed_v6_6607_0_1, dd_Smed_v6_6607_0_1, [RH, Score=164, Expect=1e-50]} {RNA1509_31269} {RNA1310_19344} {RNA815_4895} Mlig455_026156 {REF} {Length: 1851} {Pfam: PAP2 superfamily [PF01569.23, score=51.2]} {Human: ENSG00000167130, DOLPP1, dolichyldiphosphatase 1, [Score=117, Expect=6e-33]} {Mouse: ENSMUSG00000026856, Dolpp1, dolichyl pyrophosphate phosphatase 1, [RH, Score=113, Expect=1e-32]} {Smed: dd_Smed_v6_6607_0_1, dd_Smed_v6_6607_0_1, [Score=119, Expect=2e-34]} {RNA1509_31269} {RNA1310_19344} {RNA815_4895} Mlig455_026157 {REF} {Length: 366} {TRANSSPLICED} {Human: ENSG00000167130, DOLPP1, dolichyldiphosphatase 1, [Score=61.6, Expect=3e-13]} {Mouse: ENSMUSG00000026856, Dolpp1, dolichyl pyrophosphate phosphatase 1, [Score=62.8, Expect=8e-14]} {Smed: dd_Smed_v6_6607_0_1, dd_Smed_v6_6607_0_1, [Score=51.2, Expect=1e-09]} {RNA1509_31269} {RNA1310_21753} {RNA815_4895} |
6. | MligTC455_27927 | 110 | 2.29 | Mlig455_047594, Mlig455_067424 | Neo: - Age: - |
0.973 | - | - | - | - | 0.973 | - | Mlig455_047594 {REF} {Length: 233} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452} Mlig455_067424 {REF} {Length: 2126} {RNA1509_6383} {RNA1310_17474} {RNA815_9083} |
|
7. | MligTC455_27956 | 372 | 7.75 | Mlig455_001348, Mlig455_004814, Mlig455_017672, Mlig455_039228, Mlig455_046389, Mlig455_061106, Mlig455_061554 | Neo: - Age: Down-Up-Down |
0.967 | - | - | - | - | 0.967 | - | Mlig455_001348 {REF} {Length: 109} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_34957} Mlig455_004814 {REF} {Length: 1314} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_17474} {RNA815_34916} Mlig455_017672 {REF} {Length: 189} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452} Mlig455_039228 {REF} {Length: 370} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_47679} {RNA815_42452} Mlig455_046389 {REF} {Length: 206} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452} Mlig455_061106 {REF} {Length: 529} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_4200.3} Mlig455_061554 {REF} {Length: 861} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452} |
|
8. | MligTC455_52630 | 210 | 4.38 | Mlig455_059648 | Neo: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_059648 {REF} {Length: 2642} {Pfam: Otopetrin [PF03189.15, score=47.3]} {RNA1509_23358} {RNA1310_13045} {RNA815_9581} | |
9. | MligTC455_12596 | 733 | 15.27 | Mlig455_024215 | Neo: - Age: - |
FERMT2 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_024215 {REF} {Length: 4518} {Pfam: Kindlin-2 N-terminal domain [PF18124.3, score=108.4]; FERM central domain [PF00373.20, score=100.8]; PH domain [PF00169.31, score=39.8]} {Human: ENSG00000073712, FERMT2, fermitin family member 2, [RH, Score=383, Expect=9e-123]} {Mouse: ENSMUSG00000027356, Fermt1, fermitin family member 1, [RH, Score=344, Expect=2e-107]} {Dmel: FBgn0035498, Fit1, Fermitin 1, [RH, Score=495, Expect=3e-165]} {Celegans: WBGene00006836, unc-112, [RH, Score=441, Expect=2e-144]} {Smed: dd_Smed_v6_4917_0_1, dd_Smed_v6_4917_0_1, [RH, Score=424, Expect=2e-138]} {RNA1509_11372, RNA1509_28521, RNA1509_36575, RNA1509_55639, RNA1509_58913, RNA1509_59410} {RNA1310_2967.1, RNA1509_11372, RNA1509_28521, RNA1509_36575, RNA1509_55639, RNA1509_58913, RNA1509_59410} {RNA1509_11372, RNA1509_28521, RNA1509_36575, RNA1509_55639, RNA1509_58913, RNA1509_59410, RNA815_796.1} |
10. | MligTC455_34399 | 345 | 7.2 | Mlig455_053004, Mlig455_053064 | Neo: - Age: Down-Down-Up |
PLEKHG1 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_053004 {REF} {Length: 2410} {Pfam: RhoGEF domain [PF00621.22, score=64.0]} {Human: ENSG00000120278, PLEKHG1, pleckstrin homology and RhoGEF domain containing G1, [Score=127, Expect=9e-30]} {Mouse: ENSMUSG00000040624, Plekhg1, pleckstrin homology domain containing, family G (with RhoGef domain) member 1, [Score=110, Expect=1e-24]} {Dmel: FBgn0050115, GEFmeso, Guanine nucleotide exchange factor in mesoderm, [Score=105, Expect=3e-23]} {Celegans: WBGene00015704, tiam-1, TIAM (Mammalian Tumor Invasion And Metastasis factor) homolog, [Score=65.9, Expect=5e-11]} {Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [Score=100, Expect=6e-22]} {RNA1509_37218} {RNA1310_6141} {RNA815_9194.1} Mlig455_053064 {REF} {Length: 2423} {Pfam: RhoGEF domain [PF00621.22, score=63.8]} {Human: ENSG00000120278, PLEKHG1, pleckstrin homology and RhoGEF domain containing G1, [Score=128, Expect=3e-30]} {Mouse: ENSMUSG00000040624, Plekhg1, pleckstrin homology domain containing, family G (with RhoGef domain) member 1, [Score=111, Expect=6e-25]} {Dmel: FBgn0050115, GEFmeso, Guanine nucleotide exchange factor in mesoderm, [Score=105, Expect=3e-23]} {Celegans: WBGene00015704, tiam-1, TIAM (Mammalian Tumor Invasion And Metastasis factor) homolog, [Score=66.6, Expect=3e-11]} {Smed: dd_Smed_v6_4803_0_1, dd_Smed_v6_4803_0_1, [Score=100, Expect=4e-22]} {RNA1509_37218} {RNA1310_6141} {RNA815_9194.1} |
11. | MligTC455_18769 | 90 | 1.88 | Mlig455_046707 | Neo: - Age: - |
0.951 | - | - | - | - | - | 0.951 | Mlig455_046707 {REF} {Length: 4376} {NoTransDecoderORF} {RNA1509_52129} {RNA1310_53532} {RNA815_18388.1} |