TomoSeq data search

Data search

Results for MligTC455_16039

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16039	149	3.10	Mlig455_055431	Neo: - Age: Down-Up-Up		Mlig455_055431 {REF} {Length: 2205} {Pfam: Family of unknown function (DUF5662) [PF18907.2, score=82.5]} {RNA1509_1824, RNA1509_52949} {RNA1310_28557, RNA1509_52949} {RNA1509_52949, RNA815_32393}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_16039

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-4.744	2.329	0.33249	0.97862
RegionR2	-0.866	2.329	0.98393	1.00000
RegionR3	1.046	2.329	0.24559	0.78892
RegionR4	0.841	2.329	0.41379	0.74094
RegionR5	0.856	2.329	0.33125	0.67639
RegionR6	1.173	2.329	0.19582	0.76435
RegionR7	1.532	2.329	0.16402	0.74805
RegionR8	0.163	2.329	0.82655	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	6.206	2.329	0.19061	0.93000
RegenerationR2	1.379	2.329	0.06360	0.41308
RegenerationR3	0.618	2.329	0.33819	0.76258
RegenerationR4	0.893	2.329	0.17859	0.61844
RegenerationR5	0.786	2.329	0.17385	0.60306
RegenerationR6	0.372	2.329	0.58171	0.85851
RegenerationBL	0.651	2.329	0.47129	0.83772
RegenerationTP	0.811	2.329	0.41666	0.84160

Genes with expression patterns similar to MligTC455_16039

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16039	149	3.1	Mlig455_055431	Neo: - Age: Down-Up-Up		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_055431 {REF} {Length: 2205} {Pfam: Family of unknown function (DUF5662) [PF18907.2, score=82.5]} {RNA1509_1824, RNA1509_52949} {RNA1310_28557, RNA1509_52949} {RNA1509_52949, RNA815_32393}
2.	MligTC455_42141	39	0.8	Mlig455_042763	Neo: Int S/G2/M Age: Down-Up-Down	CCDC12	0.964	-	-	-	-	-	0.964	Mlig455_042763 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: cwf18 pre-mRNA splicing factor [PF08315.14, score=100.2]} {Human: ENSG00000160799, CCDC12, coiled-coil domain containing 12, [RH, Score=97.8, Expect=2e-25]} {Mouse: ENSMUSG00000019659, Ccdc12, coiled-coil domain containing 12, [RH, Score=99.0, Expect=3e-26]} {Dmel: FBgn0039732, CG15525, [RH, Score=100, Expect=9e-27]} {Celegans: WBGene00022092, Y69A2AR.21, [RH, Score=58.5, Expect=6e-11]} {RNA1509_33332, RNA1509_39598} {RNA1310_28366.1, RNA1509_33332, RNA1509_39598} {RNA1509_33332, RNA1509_39598, RNA815_13463.1}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16039

149

3.1

Mlig455_055431

Neo: -

Age: Down-Up-Up

1.000

Mlig455_055431 {REF} {Length: 2205} {Pfam: Family of unknown function (DUF5662) [PF18907.2, score=82.5]} {RNA1509_1824, RNA1509_52949} {RNA1310_28557, RNA1509_52949} {RNA1509_52949, RNA815_32393}

MligTC455_42141

0.8

Mlig455_042763

Neo: Int S/G2/M

Age: Down-Up-Down

CCDC12

0.964

Mlig455_042763 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: cwf18 pre-mRNA splicing factor [PF08315.14, score=100.2]} {Human: ENSG00000160799, CCDC12, coiled-coil domain containing 12, [RH, Score=97.8, Expect=2e-25]} {Mouse: ENSMUSG00000019659, Ccdc12, coiled-coil domain containing 12, [RH, Score=99.0, Expect=3e-26]} {Dmel: FBgn0039732, CG15525, [RH, Score=100, Expect=9e-27]} {Celegans: WBGene00022092, Y69A2AR.21, [RH, Score=58.5, Expect=6e-11]} {RNA1509_33332, RNA1509_39598} {RNA1310_28366.1, RNA1509_33332, RNA1509_39598} {RNA1509_33332, RNA1509_39598, RNA815_13463.1}