Data search


search
Exact
Search

Results for MligTC455_42141

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_42141 39 0.80 Mlig455_042763

Neo: Int S/G2/M

Age: Down-Up-Down

CCDC12 Mlig455_042763 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: cwf18 pre-mRNA splicing factor [PF08315.14, score=100.2]} {Human: ENSG00000160799, CCDC12, coiled-coil domain containing 12, [RH, Score=97.8, Expect=2e-25]} {Mouse: ENSMUSG00000019659, Ccdc12, coiled-coil domain containing 12, [RH, Score=99.0, Expect=3e-26]} {Dmel: FBgn0039732, CG15525, [RH, Score=100, Expect=9e-27]} {Celegans: WBGene00022092, Y69A2AR.21, [RH, Score=58.5, Expect=6e-11]} {RNA1509_33332, RNA1509_39598} {RNA1310_28366.1, RNA1509_33332, RNA1509_39598} {RNA1509_33332, RNA1509_39598, RNA815_13463.1}

Cumulative graph for MligTC455_42141

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.35 1.24 0.99984 1.00000
RegionR2 -2.405 1.24 1.00000 1.00000
RegionR3 0.548 1.24 0.92946 1.00000
RegionR4 5.959 1.24 1.00000 1.00000
RegionR5 3.233 1.24 0.03438 0.14282
RegionR6 -0.947 1.24 1.00000 1.00000
RegionR7 -1.968 1.24 1.00000 1.00000
RegionR8 -2.071 1.24 0.99995 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.9 1.24 1.00000 1.00000
RegenerationR2 0.03 1.24 0.86056 1.00000
RegenerationR3 0.827 1.24 0.69451 0.94572
RegenerationR4 0.433 1.24 0.93059 1.00000
RegenerationR5 0.668 1.24 0.41246 0.80732
RegenerationR6 0.93 1.24 0.82843 0.99016
RegenerationBL -1.139 1.24 0.99985 1.00000
RegenerationTP 1.471 1.24 0.94641 1.00000


Genes with expression patterns similar to MligTC455_42141

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_42141 39 0.8 Mlig455_042763

Neo: Int S/G2/M

Age: Down-Up-Down

CCDC12 2 - - - 1.000 - 1.000 Mlig455_042763 {REF} {Length: 2093} {TRANSSPLICED} {Pfam: cwf18 pre-mRNA splicing factor [PF08315.14, score=100.2]} {Human: ENSG00000160799, CCDC12, coiled-coil domain containing 12, [RH, Score=97.8, Expect=2e-25]} {Mouse: ENSMUSG00000019659, Ccdc12, coiled-coil domain containing 12, [RH, Score=99.0, Expect=3e-26]} {Dmel: FBgn0039732, CG15525, [RH, Score=100, Expect=9e-27]} {Celegans: WBGene00022092, Y69A2AR.21, [RH, Score=58.5, Expect=6e-11]} {RNA1509_33332, RNA1509_39598} {RNA1310_28366.1, RNA1509_33332, RNA1509_39598} {RNA1509_33332, RNA1509_39598, RNA815_13463.1}
2. MligTC455_16039 149 3.1 Mlig455_055431

Neo: -

Age: Down-Up-Up

0.964 - - - - - 0.964 Mlig455_055431 {REF} {Length: 2205} {Pfam: Family of unknown function (DUF5662) [PF18907.2, score=82.5]} {RNA1509_1824, RNA1509_52949} {RNA1310_28557, RNA1509_52949} {RNA1509_52949, RNA815_32393}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA