TomoSeq data search

Data search

Results for MligTC455_16154

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_16154	101	2.11	Mlig455_036031	Neo: - Age: - Region-enriched R5: 2.419/0.00639	TAF11	Mlig455_036031 {REF} {Length: 2010} {TRANSSPLICED} {Pfam: hTAFII28-like protein conserved region [PF04719.16, score=111.0]} {Human: ENSG00000064995, TAF11, TATA-box binding protein associated factor 11, [RH, Score=126, Expect=3e-36]} {Mouse: ENSMUSG00000024218, Taf11, TATA-box binding protein associated factor 11, [RH, Score=125, Expect=4e-36]} {Dmel: FBgn0011291, Taf11, TBP-associated factor 11, [RH, Score=115, Expect=1e-32]} {Celegans: WBGene00006393, taf-11.1, TAF (TBP-associated transcription factor) family, [RH, Score=107, Expect=3e-28]} {Smed: dd_Smed_v6_7233_0_1, dd_Smed_v6_7233_0_1, [RH, Score=120, Expect=2e-34]} {RNA1509_32295, RNA1509_41005} {RNA1310_42433.2, RNA1509_41005} {RNA1509_41005, RNA815_23456}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16154

101

2.11

Mlig455_036031

Neo: -

Age: -

Region-enriched R5: 2.419/0.00639

TAF11

Mlig455_036031 {REF} {Length: 2010} {TRANSSPLICED} {Pfam: hTAFII28-like protein conserved region [PF04719.16, score=111.0]} {Human: ENSG00000064995, TAF11, TATA-box binding protein associated factor 11, [RH, Score=126, Expect=3e-36]} {Mouse: ENSMUSG00000024218, Taf11, TATA-box binding protein associated factor 11, [RH, Score=125, Expect=4e-36]} {Dmel: FBgn0011291, Taf11, TBP-associated factor 11, [RH, Score=115, Expect=1e-32]} {Celegans: WBGene00006393, taf-11.1, TAF (TBP-associated transcription factor) family, [RH, Score=107, Expect=3e-28]} {Smed: dd_Smed_v6_7233_0_1, dd_Smed_v6_7233_0_1, [RH, Score=120, Expect=2e-34]} {RNA1509_32295, RNA1509_41005} {RNA1310_42433.2, RNA1509_41005} {RNA1509_41005, RNA815_23456}

Cumulative graph for MligTC455_16154

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.226	1.768	0.71899	1.00000
RegionR2	-0.235	1.768	0.93541	1.00000
RegionR3	1.698	1.768	0.02472	0.26860
RegionR4	1.743	1.768	0.05722	0.21119
RegionR5	2.419	1.768	0.00055	0.00639
RegionR6	1.833	1.768	0.04135	0.38217
RegionR7	-1.023	1.768	0.99563	1.00000
RegionR8	-6.661	1.768	0.00505	0.12703

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-6.31	1.768	0.16855	0.91014
RegenerationR2	-1.754	1.768	0.22718	0.67491
RegenerationR3	-0.417	1.768	0.80693	0.98417
RegenerationR4	-3.58	1.768	0.01044	0.15494
RegenerationR5	-1.693	1.768	0.12596	0.52955
RegenerationR6	-0.443	1.768	0.93414	1.00000
RegenerationBL	-2.36	1.768	0.99983	1.00000
RegenerationTP	2.742	1.768	0.24301	0.68895

Genes with expression patterns similar to MligTC455_16154

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16154	101	2.11	Mlig455_036031	Neo: - Age: - Region-enriched R5: 2.419/0.00639	TAF11	3	1.000	1.000	-	-	-	1.000	Mlig455_036031 {REF} {Length: 2010} {TRANSSPLICED} {Pfam: hTAFII28-like protein conserved region [PF04719.16, score=111.0]} {Human: ENSG00000064995, TAF11, TATA-box binding protein associated factor 11, [RH, Score=126, Expect=3e-36]} {Mouse: ENSMUSG00000024218, Taf11, TATA-box binding protein associated factor 11, [RH, Score=125, Expect=4e-36]} {Dmel: FBgn0011291, Taf11, TBP-associated factor 11, [RH, Score=115, Expect=1e-32]} {Celegans: WBGene00006393, taf-11.1, TAF (TBP-associated transcription factor) family, [RH, Score=107, Expect=3e-28]} {Smed: dd_Smed_v6_7233_0_1, dd_Smed_v6_7233_0_1, [RH, Score=120, Expect=2e-34]} {RNA1509_32295, RNA1509_41005} {RNA1310_42433.2, RNA1509_41005} {RNA1509_41005, RNA815_23456}
2.	MligTC455_28809	4	0.08	Mlig455_018130	Neo: - Age: Up-Down-Down	USH2A	0.956	-	-	-	-	-	0.956	Mlig455_018130 {REF} {Length: 16052} {Pfam: Fibronectin type III domain [PF00041.23, score=348.8]; Laminin EGF domain [PF00053.26, score=232.9]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=95.8]; Laminin G domain [PF02210.26, score=81.0]; Laminin G domain [PF00054.25, score=49.2]; Fibronectin type III domain [PF16893.7, score=32.9]; Chitinase A, N-terminal domain [PF08329.12, score=28.9]} {Human: ENSG00000042781, USH2A, usherin, [Score=1942, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1900, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=231, Expect=6e-60]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=281, Expect=2e-75]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=221, Expect=3e-57]} {RNA1509_50725} {RNA1310_15137} {RNA815_23018}

Nr.

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Σ Spearman correlations

Int1

Int2

Int3

Reg1

Reg2

Reg3

Annotation

MligTC455_16154

101

2.11

Mlig455_036031

Neo: -

Age: -

Region-enriched R5: 2.419/0.00639

TAF11

1.000

MligTC455_28809

0.08

Mlig455_018130

Neo: -

Age: Up-Down-Down

USH2A

0.956

Mlig455_018130 {REF} {Length: 16052} {Pfam: Fibronectin type III domain [PF00041.23, score=348.8]; Laminin EGF domain [PF00053.26, score=232.9]; Purple acid Phosphatase, N-terminal domain [PF16656.7, score=95.8]; Laminin G domain [PF02210.26, score=81.0]; Laminin G domain [PF00054.25, score=49.2]; Fibronectin type III domain [PF16893.7, score=32.9]; Chitinase A, N-terminal domain [PF08329.12, score=28.9]} {Human: ENSG00000042781, USH2A, usherin, [Score=1942, Expect=0.0]} {Mouse: ENSMUSG00000026609, Ush2a, usherin, [Score=1900, Expect=0.0]} {Dmel: FBgn0261563, wb, wing blister, [Score=231, Expect=6e-60]} {Celegans: WBGene00001328, epi-1, Laminin-like protein epi-1, [Score=281, Expect=2e-75]} {Smed: dd_Smed_v6_7924_0_5, dd_Smed_v6_7924_0_5, [Score=221, Expect=3e-57]} {RNA1509_50725} {RNA1310_15137} {RNA815_23018}