Data search
Results for MligTC455_16251
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16251 | 506 | 10.55 | Mlig455_047256 | Neo: - Age: - |
GRIK1 | Mlig455_047256 {REF} {Length: 3857} {Pfam: Ligand-gated ion channel [PF00060.28, score=64.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=30.5]; S1 RNA binding domain [PF00575.25, score=19.0]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=83.2, Expect=2e-15]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=79.7, Expect=2e-14]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=85.9, Expect=1e-16]} {Dmel: FBgn0038840, Grik, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [RH, Score=103, Expect=2e-22]} {RNA1509_45784} {RNA1310_5319.1} {RNA815_1612} |
Cumulative graph for MligTC455_16251
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.544 | 3.708 | 0.25465 | 0.90254 | |
| RegionR2 | 0.939 | 3.708 | 0.06749 | 0.31553 | |
| RegionR3 | 0.306 | 3.708 | 0.49668 | 0.99293 | |
| RegionR4 | -0.136 | 3.708 | 0.79263 | 1.00000 | |
| RegionR5 | -1.207 | 3.708 | 0.01883 | 0.09277 | |
| RegionR6 | 0.646 | 3.708 | 0.14910 | 0.68814 | |
| RegionR7 | 0.433 | 3.708 | 0.45748 | 1.00000 | |
| RegionR8 | 0.561 | 3.708 | 0.42860 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.99 | 3.708 | 0.24021 | 0.96582 | |
| RegenerationR2 | 0.425 | 3.708 | 0.27861 | 0.72219 | |
| RegenerationR3 | 0.501 | 3.708 | 0.27456 | 0.70884 | |
| RegenerationR4 | 0.402 | 3.708 | 0.39859 | 0.81244 | |
| RegenerationR5 | 1.375 | 3.708 | 0.00513 | 0.12982 | |
| RegenerationR6 | 0.027 | 3.708 | 0.95549 | 1.00000 | |
| RegenerationBL | 0.395 | 3.708 | 0.43212 | 0.79998 | |
| RegenerationTP | -0.314 | 3.708 | 0.61029 | 0.96674 |
Genes with expression patterns similar to MligTC455_16251
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16251 | 506 | 10.55 | Mlig455_047256 | Neo: - Age: - |
GRIK1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_047256 {REF} {Length: 3857} {Pfam: Ligand-gated ion channel [PF00060.28, score=64.0]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=30.5]; S1 RNA binding domain [PF00575.25, score=19.0]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=83.2, Expect=2e-15]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=79.7, Expect=2e-14]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=85.9, Expect=1e-16]} {Dmel: FBgn0038840, Grik, [Score=72.0, Expect=2e-12]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [RH, Score=103, Expect=2e-22]} {RNA1509_45784} {RNA1310_5319.1} {RNA815_1612} |
| 2. | MligTC455_10416 | 765 | 15.93 | Mlig455_008958 | Neo: - Age: - Region-enriched R8: 1.474/0.04842 |
2.548 | - | 0.843 | - | 0.755 | 0.950 | - | Mlig455_008958 {REF} {Length: 515} {NoTransDecoderORF} {RNA1310_120997} {RNA815_53530} | |
| 3. | MligTC455_51903 | 1283 | 26.73 | Mlig455_021657, Mlig455_067458 | Neo: - |
CHRNB1, CHRNB3 | 2.541 | - | - | - | 0.760 | 0.951 | 0.830 | Mlig455_021657 {REF} {Length: 2044} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=147.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=73.5]} {Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=193, Expect=5e-56]; ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=189, Expect=1e-54]} {Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=187, Expect=8e-54]; ENSMUSG00000035594, Chrna5, cholinergic receptor, nicotinic, alpha polypeptide 5, [Score=186, Expect=1e-53]; ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=179, Expect=5e-51]} {Dmel: FBgn0000036, nAChRalpha1, nicotinic Acetylcholine Receptor alpha1, [Score=176, Expect=3e-49]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=174, Expect=9e-49]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=346, Expect=9e-116]} {RNA1509_8724} {RNA1310_17144.1, RNA1509_8724} {RNA1509_8724, RNA815_6285} Mlig455_067458 {REF} {Length: 1512} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=43.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=18.7]} {Human: ENSG00000283946, CHRNB1, cholinergic receptor nicotinic beta 1 subunit, [Score=48.1, Expect=7e-06]; ENSG00000170175, CHRNB1, cholinergic receptor nicotinic beta 1 subunit, [Score=48.1, Expect=7e-06]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=47.8, Expect=1e-05]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=47.4, Expect=1e-05]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=46.6, Expect=1e-05]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=96.7, Expect=1e-22]} {RNA1509_8724} {RNA1310_17144.1} {RNA815_6285} |
| 4. | MligTC455_52249 | 1365 | 28.44 | Mlig455_007872 | Neo: - Age: Down-Down-Up Region-enriched R2: 1.111/0.04280 |
2.512 | - | - | 0.808 | - | 0.954 | 0.750 | Mlig455_007872 {REF} {Length: 2081} {Pfam: Transmembrane protein 237 [PF15383.8, score=91.3]} {Mouse: ENSMUSG00000038079, Tmem237, transmembrane protein 237, [Score=55.1, Expect=1e-07]} {RNA1509_6211} {RNA1310_13658, RNA1509_6211} {RNA1509_6211, RNA815_1318.1} | |
| 5. | MligTC455_19115 | 184 | 3.83 | Mlig455_044234 | Neo: - Age: logFC(26M/2M)=-0.512 Region-enriched R4: 3.012/0.02283 |
2.491 | 0.956 | - | 0.761 | - | 0.774 | - | Mlig455_044234 {REF} {Length: 1695} {RNA1509_40702} {RNA1310_18749, RNA1509_40702} {RNA1509_40702, RNA815_7953} | |
| 6. | MligTC455_46080 | 6035 | 125.73 | Mlig455_028154 | Neo: - Age: - |
MVP | 2.452 | - | - | 0.733 | - | 0.950 | 0.769 | Mlig455_028154 {REF} {Length: 4279} {Pfam: Major Vault Protein repeat domain [PF01505.20, score=211.7]; Shoulder domain [PF11978.10, score=168.6]; Major Vault Protein repeat domain [PF17794.3, score=126.9]; Major Vault Protein Repeat domain [PF17795.3, score=121.0]; Major Vault Protein repeat domain [PF17796.3, score=105.2]} {Human: ENSG00000013364, MVP, major vault protein, [RH, Score=1070, Expect=0.0]} {Mouse: ENSMUSG00000030681, Mvp, major vault protein, [RH, Score=1066, Expect=0.0]} {Smed: dd_Smed_v6_1098_0_1, dd_Smed_v6_1098_0_1, [RH, Score=1104, Expect=0.0]} {RNA1509_12022, RNA1509_1449, RNA1509_17945, RNA1509_5740, RNA1509_7827} {RNA1310_2563.1, RNA1509_12022, RNA1509_1449, RNA1509_17945, RNA1509_5740, RNA1509_7827} {RNA1509_12022, RNA1509_1449, RNA1509_17945, RNA1509_5740, RNA1509_7827, RNA815_968.1} |
| 7. | MligTC455_46426 | 2278 | 47.46 | Mlig455_028820 | Neo: - Age: - |
1.886 | - | - | - | 0.929 | 0.957 | - | Mlig455_028820 {REF} {Length: 1179} {RNA1509_54782} {RNA1310_7508} {RNA815_176.1} | |
| 8. | MligTC455_49457 | 1225 | 25.52 | Mlig455_005617, Mlig455_014432, Mlig455_070181 | Neo: - |
1.81 | - | - | 0.845 | - | 0.965 | - | Mlig455_005617 {REF} {Length: 1304} {RNA1509_48463} {RNA1310_46663, RNA1509_48463} {RNA1509_48463, RNA815_4404.1} Mlig455_014432 {REF} {Length: 1338} {RNA1509_48463} {RNA1310_46663} {RNA815_4404.1} Mlig455_070181 {REF} {Length: 1176} {RNA1509_47545, RNA1509_48463} {RNA1310_46663, RNA1509_47545} {RNA1509_47545, RNA815_4404.1} |
|
| 9. | MligTC455_40489 | 3814 | 79.46 | Mlig455_034553, Mlig455_041490 | Neo: - Age: Up-Up-Down |
1.664 | - | - | - | 0.714 | 0.950 | - | Mlig455_034553 {REF} {Length: 3759} {tRNA: Val(CAC),pseudo, score=28.2} {RNA1509_20260, RNA1509_39825, RNA1509_45069, RNA1509_9071} {RNA1310_21936, RNA1509_20260, RNA1509_39825, RNA1509_45069, RNA1509_9071} {RNA1509_20260, RNA1509_39825, RNA1509_45069, RNA1509_9071, RNA815_6140} Mlig455_041490 {REF} {Length: 4332} {tRNA: Val(CAC),pseudo, score=28.2} {RNA1509_48316} {RNA1310_21936} {RNA815_6140} |
|
| 10. | MligTC455_18745 | 67 | 1.4 | Mlig455_000450 | Neo: - Age: Down-Up-Up |
0.956 | 0.956 | - | - | - | - | - | Mlig455_000450 {REF} {Length: 1990} {Smed: dd_Smed_v6_500_0_1, dd_Smed_v6_500_0_1, [Score=60.8, Expect=1e-10]} {RNA1509_9302} {RNA1310_672.1} {RNA815_15342} | |
| 11. | MligTC455_30192 | 1664 | 34.66 | Mlig455_026693 | Neo: - Age: - |
FOXRED2 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_026693 {REF} {Length: 18036} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=147.7]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=45.8]; HI0933-like protein [PF03486.16, score=31.1]; FAD dependent oxidoreductase [PF01266.26, score=26.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=25.0]; FAD binding domain [PF01494.21, score=22.8]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=22.5]; Flavin containing amine oxidoreductase [PF01593.26, score=21.9]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.1]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [RH, Score=493, Expect=4e-167]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [RH, Score=498, Expect=3e-169]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [Score=53.5, Expect=4e-07]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=474, Expect=4e-161]} {RNA1509_13675, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1310_861.1, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978, RNA815_570.1} |
| 12. | MligTC455_08638 | 310 | 6.46 | Mlig455_062686 | Neo: - Age: Up-Down-Down |
CTNND2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_062686 {REF} {Length: 6196} {TRANSSPLICED} {Pfam: Armadillo/beta-catenin-like repeat [PF00514.25, score=111.2]; HEAT repeats [PF13646.8, score=23.1]} {Human: ENSG00000169862, CTNND2, catenin delta 2, [RH, Score=358, Expect=1e-105]; ENSG00000144283, PKP4, plakophilin 4, [RH, Score=341, Expect=3e-99]} {Mouse: ENSMUSG00000022240, Ctnnd2, catenin (cadherin associated protein), delta 2, [RH, Score=353, Expect=1e-103]; ENSMUSG00000026991, Pkp4, plakophilin 4, [RH, Score=341, Expect=1e-99]} {Dmel: FBgn0260799, p120ctn, Adherens junction protein p120, [RH, Score=397, Expect=7e-124]} {Celegans: WBGene00002175, jac-1, Juxtamembrane domain-associated catenin, [RH, Score=303, Expect=4e-86]} {Smed: dd_Smed_v6_6256_0_1, dd_Smed_v6_6256_0_1, [RH, Score=241, Expect=5e-67]} {RNA1509_13591} {RNA1310_6045} {RNA815_14763} |
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