M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_16263

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16263 109 2.28 Mlig455_023494, Mlig455_049156, Mlig455_049194

Neo: -

Age: -

Mlig455_023494 {REF} {Length: 1030} {RNA1509_39265} {RNA1310_25708} {RNA815_39755}

Mlig455_049156 {REF} {Length: 3295} {RNA1509_39265} {RNA1310_25708, RNA1509_39265} {RNA1509_39265, RNA815_39755}

Mlig455_049194 {REF} {Length: 946} {NoTransDecoderORF} {RNA1509_39265} {RNA1310_25708} {RNA815_39755}

Cumulative graph for MligTC455_16263

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.161 2.044 0.59436 1.00000
RegionR2 1.714 2.044 0.25728 0.63770
RegionR3 -0.979 2.044 0.98811 1.00000
RegionR4 -0.67 2.044 0.97043 1.00000
RegionR5 -0.859 2.044 0.98357 1.00000
RegionR6 0.666 2.044 0.56831 1.00000
RegionR7 1.23 2.044 0.39599 1.00000
RegionR8 2.059 2.044 0.20775 0.80869

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.41 2.044 0.99990 1.00000
RegenerationR2 0.302 2.044 0.73031 0.96572
RegenerationR3 0.549 2.044 0.67029 0.93708
RegenerationR4 0.777 2.044 0.55244 0.89332
RegenerationR5 -0.709 2.044 0.51482 0.86697
RegenerationR6 0.056 2.044 0.96069 1.00000
RegenerationBL -0.053 2.044 0.94306 1.00000
RegenerationTP -4.739 2.044 0.02100 0.24782


Genes with expression patterns similar to MligTC455_16263

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16263 109 2.28 Mlig455_023494, Mlig455_049156, Mlig455_049194

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_023494 {REF} {Length: 1030} {RNA1509_39265} {RNA1310_25708} {RNA815_39755}

Mlig455_049156 {REF} {Length: 3295} {RNA1509_39265} {RNA1310_25708, RNA1509_39265} {RNA1509_39265, RNA815_39755}

Mlig455_049194 {REF} {Length: 946} {NoTransDecoderORF} {RNA1509_39265} {RNA1310_25708} {RNA815_39755}
2. MligTC455_21595 144 2.99 Mlig455_011768, Mlig455_033798, Mlig455_033808

Neo: Irradiation

Age: Up-Down-Up

 2.583 - - 0.963 - 0.774 0.846

Mlig455_011768 {REF} {Length: 1981} {RNA1509_56841} {RNA1310_5686} {RNA815_25602}

Mlig455_033798 {REF} {Length: 920} {Smed: dd_Smed_v6_9549_0_1, dd_Smed_v6_9549_0_1, [Score=48.9, Expect=1e-06]} {RNA1509_56841} {RNA1310_51347} {RNA815_22112}

Mlig455_033808 {REF} {Length: 365} {RNA1509_56841} {RNA1310_51347} {RNA815_22112}
3. MligTC455_06766 45 0.93 Mlig455_058800

Neo: -

Age: -

 2.397 - - 0.980 - 0.715 0.702 Mlig455_058800 {REF} {Length: 516} {NoTransDecoderORF}
4. MligTC455_40709 231 4.8 Mlig455_030402

Neo: -

Age: -

 APBB1 1.784 0.962 - - - 0.822 - Mlig455_030402 {REF} {Length: 2849} {TRANSSPLICED} {Pfam: Phosphotyrosine interaction domain (PTB/PID) [PF00640.25, score=43.0]} {Human: ENSG00000166313, APBB1, amyloid beta precursor protein binding family B member 1, [RH, Score=167, Expect=1e-44]} {Mouse: ENSMUSG00000037032, Apbb1, amyloid beta (A4) precursor protein-binding, family B, member 1, [Score=172, Expect=1e-46]; ENSMUSG00000029207, Apbb2, amyloid beta (A4) precursor protein-binding, family B, member 2, [Score=169, Expect=3e-44]} {Celegans: WBGene00001410, feh-1, Protein Fe65 homolog, [Score=165, Expect=5e-44]} {RNA1509_23921} {RNA1310_8806} {RNA815_19651}
5. MligTC455_39009 42 0.88 Mlig455_022189, Mlig455_046042

Neo: -

Age: -

 1.737 - - 0.956 - - 0.781

Mlig455_022189 {REF} {Length: 198} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_59969} {RNA815_41194.1}

Mlig455_046042 {REF} {Length: 660} {NoTransDecoderORF} {RNA1509_59553} {RNA1310_127391} {RNA815_64986}
6. MligTC455_50146 37 0.77 Mlig455_050983

Neo: -

Age: -

 NPSR1 1.677 - - 0.725 - 0.952 - Mlig455_050983 {REF} {Length: 1326} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=105.5]} {Human: ENSG00000187258, NPSR1, neuropeptide S receptor 1, [Score=63.5, Expect=1e-10]} {Mouse: ENSMUSG00000029255, Gnrhr, gonadotropin releasing hormone receptor, [Score=66.6, Expect=4e-12]; ENSMUSG00000044014, Npy5r, neuropeptide Y receptor Y5, [Score=65.5, Expect=3e-11]} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=72.8, Expect=1e-13]} {Celegans: WBGene00013642, daf-38, G-protein coupled receptor daf-38, [Score=65.5, Expect=1e-11]} {Smed: dd_Smed_v6_75337_0_1, dd_Smed_v6_75337_0_1, [Score=66.6, Expect=2e-12]} {RNA1310_64751.2}
7. MligTC455_32048 356 7.42 Mlig455_004642, Mlig455_008910, Mlig455_008911, Mlig455_008913, Mlig455_018107, Mlig455_026786, Mlig455_042543, Mlig455_046157, Mlig455_055522

Neo: -

Age: -

 0.977 0.977 - - - - -

Mlig455_004642 {REF} {Length: 641} {RNA1509_20257} {RNA1310_9148.1} {RNA815_5729}

Mlig455_008910 {REF} {Length: 795} {NoTransDecoderORF} {RNA1509_10924} {RNA1310_17734} {RNA815_9399}

Mlig455_008911 {REF} {Length: 291} {NoTransDecoderORF} {RNA1509_26748} {RNA1310_9148.2} {RNA815_5729}

Mlig455_008913 {REF} {Length: 523} {NoTransDecoderORF} {RNA1509_20257} {RNA1310_9148.1} {RNA815_5729}

Mlig455_018107 {REF} {Length: 834} {NoTransDecoderORF} {RNA1509_10924} {RNA1310_17734} {RNA815_9399}

Mlig455_026786 {REF} {Length: 1864} {RNA1509_5808} {RNA1310_9148.1} {RNA815_9399}

Mlig455_042543 {REF} {Length: 8038} {NoTransDecoderORF} {RNA1509_5808} {RNA1310_9148.1} {RNA815_5444.1}

Mlig455_046157 {REF} {Length: 924} {TRANSSPLICED} {RNA1509_10924} {RNA1310_17734} {RNA815_9399}

Mlig455_055522 {REF} {Length: 1898} {RNA1509_20257} {RNA1310_9148.1} {RNA815_17066.1}
8. MligTC455_12105 21 0.43 Mlig455_015631

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_015631 {REF} {Length: 1685} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=64.7]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=27.3]; Serpentine type 7TM GPCR chemoreceptor Srbc [PF10316.11, score=22.5]} {Smed: dd_Smed_v6_13742_0_1, dd_Smed_v6_13742_0_1, [Score=82.4, Expect=2e-17]} {RNA1310_95837}
9. MligTC455_23995 11 0.23 Mlig455_069754

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_069754 {REF} {Length: 1021} {NoTransDecoderORF} {RNA1509_48790} {RNA1310_52771} {RNA815_34510}
10. MligTC455_03892 8 0.18 Mlig455_009194

Neo: -

Age: -

 0.973 - - 0.973 - - - Mlig455_009194 {REF} {Length: 2218} {TRANSSPLICED} {Dmel: FBgn0035248, CG13919, [RH, Score=45.4, Expect=1e-05]} {Smed: dd_Smed_v6_16261_0_1, dd_Smed_v6_16261_0_1, [RH, Score=255, Expect=7e-81]} {RNA1509_28905} {RNA1310_72348.1} {RNA815_44982}
11. MligTC455_06333 34 0.7 Mlig455_017581

Neo: -

Age: -

 0.972 - - 0.972 - - - Mlig455_017581 {REF} {Length: 423} {NoTransDecoderORF}
12. MligTC455_18997 30 0.62 Mlig455_032972

Neo: -

Age: logFC(26M/2M)=-0.312

 KLKB1 0.97 - - 0.970 - - - Mlig455_032972 {REF} {Length: 2301} {TRANSSPLICED} {Pfam: Trypsin [PF00089.28, score=98.3]} {Human: ENSG00000164344, KLKB1, kallikrein B1, [Score=80.9, Expect=2e-15]} {Mouse: ENSMUSG00000016942, Tmprss6, transmembrane serine protease 6, [Score=73.6, Expect=3e-13]; ENSMUSG00000049291, Prss38, protease, serine 38, [Score=70.5, Expect=7e-13]} {Dmel: FBgn0033362, CG8172, [Score=73.6, Expect=8e-14]} {Celegans: WBGene00006620, svh-1, HGF/MSP/plasminogen-like protein, [Score=73.2, Expect=2e-13]} {Smed: dd_Smed_v6_7481_0_1, dd_Smed_v6_7481_0_1, [RH, Score=101, Expect=1e-23]} {RNA1509_10182} {RNA1310_3302.1} {RNA815_8189.1}
13. MligTC455_50229 176 3.66 Mlig455_010733

Neo: -

Age: -

 TAB1 0.97 - - 0.970 - - - Mlig455_010733 {REF} {Length: 3464} {TRANSSPLICED} {Pfam: Protein phosphatase 2C [PF00481.23, score=20.5]} {Human: ENSG00000100324, TAB1, TGF-beta activated kinase 1 (MAP3K7) binding protein 1, [RH, Score=50.8, Expect=3e-06]} {Mouse: ENSMUSG00000022414, Tab1, TGF-beta activated kinase 1/MAP3K7 binding protein 1, [RH, Score=51.2, Expect=2e-06]} {RNA1509_20706} {RNA1310_18794, RNA1509_20706} {RNA1509_20706, RNA815_17460}
14. MligTC455_41728 30 0.62 Mlig455_027804

Neo: -

Age: logFC(26M/2M)=-0.380

 KATNAL2 0.969 - - 0.969 - - - Mlig455_027804 {REF} {Length: 2299} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=126.6]; AAA+ lid domain [PF17862.3, score=47.1]; LisH [PF08513.13, score=26.4]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=22.3]; AAA ATPase domain [PF13191.8, score=19.5]; TIP49 P-loop domain [PF06068.15, score=19.1]; AAA domain (dynein-related subfamily) [PF07728.16, score=18.8]; Magnesium chelatase, subunit ChlI [PF01078.23, score=18.1]} {Human: ENSG00000167216, KATNAL2, katanin catalytic subunit A1 like 2, [RH, Score=609, Expect=0.0]} {Mouse: ENSMUSG00000025420, Katnal2, katanin p60 subunit A-like 2, [RH, Score=609, Expect=0.0]} {Dmel: FBgn0040208, Kat60, Katanin 60, [Score=279, Expect=4e-86]} {Celegans: WBGene00003183, mei-1, Meiotic spindle formation protein mei-1, [Score=260, Expect=3e-80]} {Smed: dd_Smed_v6_14853_0_1, dd_Smed_v6_14853_0_1, [RH, Score=646, Expect=0.0]} {RNA1509_14139, RNA1509_56577} {RNA1310_9263.1, RNA1509_56577} {RNA1509_56577, RNA815_5637}
15. MligTC455_36334 30 0.62 Mlig455_041900

Neo: -

Age: Up-Up-Down

Region-enriched R2: 9.749/0.00702

 URGCP 0.968 - - 0.968 - - - Mlig455_041900 {REF} {Length: 7730} {Pfam: Dynamin family [PF00350.25, score=22.8]; 50S ribosome-binding GTPase [PF01926.25, score=20.2]} {Human: ENSG00000106608, URGCP, upregulator of cell proliferation, [RH, Score=216, Expect=4e-57]} {Mouse: ENSMUSG00000078606, Gm4070, predicted gene 4070, [RH, Score=527, Expect=1e-154]; ENSMUSG00000045868, Gvin1, GTPase, very large interferon inducible 1, [RH, Score=527, Expect=1e-154]} {RNA1509_40173} {RNA1310_4704.1, RNA1509_40173} {RNA1509_40173, RNA815_32622}
16. MligTC455_28055 19 0.41 Mlig455_048300, Mlig455_048327, Mlig455_048344

Neo: -

Age: -

 MARK2, MARK4 0.966 - - 0.966 - - -

Mlig455_048300 {REF} {Length: 2504} {Pfam: Protein kinase domain [PF00069.27, score=157.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.8]; Kinase-like [PF14531.8, score=21.5]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.4]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=158, Expect=1e-39]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=157, Expect=2e-39]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=152, Expect=7e-38]; ENSG00000160584, SIK3, SIK family kinase 3, [Score=152, Expect=2e-37]; ENSG00000074590, NUAK1, NUAK family kinase 1, [Score=151, Expect=1e-37]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=158, Expect=8e-40]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=156, Expect=3e-39]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=152, Expect=8e-38]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=151, Expect=7e-38]; ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=151, Expect=4e-37]; ENSMUSG00000020032, Nuak1, NUAK family, SNF1-like kinase, 1, [Score=151, Expect=1e-37]} {Dmel: FBgn0026064, KP78a, [Score=156, Expect=2e-39]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=163, Expect=4e-41]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=317, Expect=1e-97]} {RNA1310_58898} {RNA815_35373}

Mlig455_048327 {REF} {Length: 2998} {Pfam: Protein kinase domain [PF00069.27, score=157.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=86.7]; Kinase-like [PF14531.8, score=21.4]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.3]} {Human: ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=159, Expect=1e-39]; ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=159, Expect=6e-40]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=153, Expect=5e-38]; ENSG00000160584, SIK3, SIK family kinase 3, [Score=153, Expect=2e-37]; ENSG00000074590, NUAK1, NUAK family kinase 1, [Score=152, Expect=1e-37]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=159, Expect=7e-40]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=157, Expect=2e-39]; ENSMUSG00000009772, Nuak2, NUAK family, SNF1-like kinase, 2, [Score=152, Expect=5e-38]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=152, Expect=5e-38]; ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=152, Expect=3e-37]} {Dmel: FBgn0026064, KP78a, [Score=157, Expect=9e-40]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=164, Expect=2e-41]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [Score=318, Expect=1e-97]} {RNA1310_58898} {RNA815_35373}

Mlig455_048344 {REF} {Length: 2992} {Pfam: Protein kinase domain [PF00069.27, score=216.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=130.0]; Kinase-like [PF14531.8, score=22.0]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.6]} {Human: ENSG00000007047, MARK4, microtubule affinity regulating kinase 4, [Score=213, Expect=1e-58]; ENSG00000072518, MARK2, microtubule affinity regulating kinase 2, [Score=212, Expect=6e-58]; ENSG00000075413, MARK3, microtubule affinity regulating kinase 3, [Score=207, Expect=3e-56]; ENSG00000160584, SIK3, SIK family kinase 3, [Score=206, Expect=2e-54]} {Mouse: ENSMUSG00000024969, Mark2, MAP/microtubule affinity regulating kinase 2, [Score=212, Expect=3e-58]; ENSMUSG00000030397, Mark4, MAP/microtubule affinity regulating kinase 4, [Score=212, Expect=5e-58]; ENSMUSG00000034135, Sik3, SIK family kinase 3, [Score=207, Expect=3e-55]; ENSMUSG00000007411, Mark3, MAP/microtubule affinity regulating kinase 3, [Score=206, Expect=4e-56]} {Dmel: FBgn0026064, KP78a, [Score=213, Expect=1e-58]} {Celegans: WBGene00003916, par-1, Serine/threonine-protein kinase par-1, [Score=217, Expect=7e-59]} {Smed: dd_Smed_v6_14823_0_1, dd_Smed_v6_14823_0_1, [RH, Score=465, Expect=5e-154]} {RNA1310_58898} {RNA815_35373}
17. MligTC455_31235 298 6.22 Mlig455_007957, Mlig455_018106, Mlig455_018108, Mlig455_018110, Mlig455_024170, Mlig455_026289, Mlig455_046160, Mlig455_056610, Mlig455_061406, Mlig455_065569, Mlig455_069763

Neo: -

Age: Up-Down-Up

 PRR9 0.966 - - 0.966 - - -

Mlig455_007957 {REF} {Length: 1663} {RNA1509_46145} {RNA1310_47677} {RNA815_5444.1}

Mlig455_018106 {REF} {Length: 764} {NoTransDecoderORF} {RNA1509_46145} {RNA1310_51772} {RNA815_5444.1}

Mlig455_018108 {REF} {Length: 785} {NoTransDecoderORF} {RNA1509_46145} {RNA1310_51772} {RNA815_5444.1}

Mlig455_018110 {REF} {Length: 830} {NoTransDecoderORF} {RNA1509_46145} {RNA1310_51772} {RNA815_5444.1}

Mlig455_024170 {REF} {Length: 1434} {RNA1509_5808} {RNA1310_42249} {RNA815_5444.1}

Mlig455_026289 {REF} {Length: 1433} {RNA1509_5808} {RNA1310_42249} {RNA815_5444.1}

Mlig455_046160 {REF} {Length: 836} {NoTransDecoderORF} {RNA1509_46145} {RNA1310_51772} {RNA815_5444.1}

Mlig455_056610 {REF} {Length: 1652} {RNA1509_5808} {RNA1310_42249} {RNA815_5444.1}

Mlig455_061406 {REF} {Length: 1433} {RNA1509_5808} {RNA1310_42249} {RNA815_5444.1}

Mlig455_065569 {REF} {Length: 3509} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=47.4, Expect=2e-06]} {Celegans: WBGene00018026, F35A5.4, [Score=60.5, Expect=3e-10]} {RNA1509_46145} {RNA1310_42249} {RNA815_5444.1}

Mlig455_069763 {REF} {Length: 469} {NoTransDecoderORF} {RNA1509_46145} {RNA1310_9148.2} {RNA815_9953}
18. MligTC455_26296 29 0.6 Mlig455_039775

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.567

 0.964 - - 0.964 - - - Mlig455_039775 {REF} {Length: 11147} {RNA1509_17190} {RNA1310_9848.1} {RNA815_5685.1}
19. MligTC455_47950 161 3.36 Mlig455_031570

Neo: -

Age: logFC(26M/2M)=-0.427

 GRID2IP 0.964 0.964 - - - - - Mlig455_031570 {REF} {Length: 4000} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=39.4]; PDZ domain [PF17820.3, score=31.7]; PDZ domain [PF13180.8, score=22.0]} {Human: ENSG00000215045, GRID2IP, Grid2 interacting protein, [Score=57.0, Expect=1e-07]} {Dmel: FBgn0264598, PsGEF, Protostome-specific GEF, [Score=73.2, Expect=7e-13]} {Smed: dd_Smed_v6_12613_0_1, dd_Smed_v6_12613_0_1, [Score=55.1, Expect=1e-07]} {RNA1509_38079} {RNA1310_16413} {RNA815_31333}
20. MligTC455_50177 26 0.55 Mlig455_050182

Neo: -

Age: -

 0.963 - - 0.963 - - - Mlig455_050182 {REF} {Length: 1326} {RNA1310_32436}
21. MligTC455_38022 31 0.66 Mlig455_052112

Neo: -

Age: -

 0.962 - - 0.962 - - - Mlig455_052112 {REF} {Length: 1091} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_68525} {RNA815_47119}
22. MligTC455_06845 32 0.67 Mlig455_060389

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_060389 {REF} {Length: 566} {NoTransDecoderORF}
23. MligTC455_11579 34 0.71 Mlig455_045788

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_045788 {REF} {Length: 2523} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=39.4]} {RNA1509_6409} {RNA1310_984} {RNA815_7594.1}
24. MligTC455_28147 79 1.65 Mlig455_012968

Neo: -

Age: Down-Up-Down

 0.959 - - 0.959 - - - Mlig455_012968 {REF} {Length: 4172} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_53435} {RNA1310_34828.2} {RNA815_11419.1}
25. MligTC455_31931 18 0.38 Mlig455_020066

Neo: -

Age: logFC(26M/2M)=-0.595

 MAP3K4 0.959 - - 0.959 - - - Mlig455_020066 {REF} {Length: 2970} {Pfam: Protein kinase domain [PF00069.27, score=135.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=94.7]; Ankyrin repeats (3 copies) [PF12796.9, score=74.4]; Ankyrin repeats (many copies) [PF13637.8, score=52.7]; Ankyrin repeat [PF13606.8, score=51.4]; Ankyrin repeats (many copies) [PF13857.8, score=46.3]; Ankyrin repeat [PF00023.32, score=45.2]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=104, Expect=3e-22]; ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=103, Expect=8e-23]; ENSG00000197442, MAP3K5, mitogen-activated protein kinase kinase kinase 5, [Score=100, Expect=4e-21]; ENSG00000126562, WNK4, WNK lysine deficient protein kinase 4, [Score=100, Expect=4e-21]; ENSG00000180815, MAP3K15, mitogen-activated protein kinase kinase kinase 15, [Score=99.8, Expect=6e-21]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=102, Expect=7e-22]; ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=102, Expect=2e-22]; ENSMUSG00000035112, Wnk4, WNK lysine deficient protein kinase 4, [Score=101, Expect=1e-21]; ENSMUSG00000071369, Map3k5, mitogen-activated protein kinase kinase kinase 5, [Score=100, Expect=3e-21]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=99.4, Expect=6e-21]; ENSMUSG00000041245, Wnk3, WNK lysine deficient protein kinase 3, [Score=97.1, Expect=1e-20]; ENSMUSG00000045962, Wnk1, WNK lysine deficient protein kinase 1, [Score=97.1, Expect=3e-20]} {Dmel: FBgn0024329, Mekk1, [Score=97.4, Expect=2e-20]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=112, Expect=3e-25]} {Smed: dd_Smed_v6_2030_0_14, dd_Smed_v6_2030_0_14, [Score=104, Expect=1e-23]} {RNA1509_26758} {RNA1310_10050} {RNA815_10088.1}
26. MligTC455_53418 24 0.51 Mlig455_070635

Neo: -

Age: logFC(26M/2M)=-0.617

 ZBTB8A 0.957 - - 0.957 - - - Mlig455_070635 {REF} {Length: 2314} {Pfam: NPH3 family [PF03000.16, score=43.7]; BTB/POZ domain [PF00651.33, score=42.1]} {Human: ENSG00000160062, ZBTB8A, zinc finger and BTB domain containing 8A, [Score=51.2, Expect=2e-06]; ENSG00000148411, NACC2, NACC family member 2, [Score=49.7, Expect=1e-05]} {Mouse: ENSMUSG00000026932, Nacc2, nucleus accumbens associated 2, BEN and BTB (POZ) domain containing, [Score=50.4, Expect=4e-06]; ENSMUSG00000028807, Zbtb8a, zinc finger and BTB domain containing 8a, [Score=50.1, Expect=4e-06]} {Smed: dd_Smed_v6_8081_0_1, dd_Smed_v6_8081_0_1, [Score=185, Expect=9e-52]} {RNA1509_2983} {RNA1310_41353} {RNA815_5532.1}
27. MligTC455_03895 18 0.37 Mlig455_009197, Mlig455_009619

Neo: -

Age: Down-Up-Down

 0.956 - - 0.956 - - -

Mlig455_009197 {REF} {Length: 1774} {Smed: dd_Smed_v6_16261_0_1, dd_Smed_v6_16261_0_1, [Score=254, Expect=7e-82]} {RNA1310_72348.1} {RNA815_44982}

Mlig455_009619 {REF} {Length: 1794} {Smed: dd_Smed_v6_16261_0_1, dd_Smed_v6_16261_0_1, [Score=254, Expect=7e-82]} {RNA1310_72348.1} {RNA815_44982}
28. MligTC455_27392 69 1.44 Mlig455_025611

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_025611 {REF} {Length: 1130} {NoTransDecoderORF} {RNA1509_53194} {RNA1310_47725} {RNA815_22886.1}
29. MligTC455_32591 24 0.49 Mlig455_055614

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_055614 {REF} {Length: 5666} {RNA1509_50311} {RNA1310_1521.1} {RNA815_920.1}
30. MligTC455_40788 442 9.2 Mlig455_048951

Neo: -

Age: -

 SUZ12 0.956 0.956 - - - - - Mlig455_048951 {REF} {Length: 2627} {TRANSSPLICED} {Pfam: VEFS-Box of polycomb protein [PF09733.11, score=116.0]} {Human: ENSG00000178691, SUZ12, SUZ12, polycomb repressive complex 2 subunit, [RH, Score=250, Expect=2e-72]} {Mouse: ENSMUSG00000017548, Suz12, SUZ12 polycomb repressive complex 2 subunit, [RH, Score=253, Expect=1e-73]} {Dmel: FBgn0020887, Su(z)12, [RH, Score=187, Expect=1e-49]} {Smed: dd_Smed_v6_12930_0_1, dd_Smed_v6_12930_0_1, [RH, Score=193, Expect=3e-53]} {RNA1509_42645} {RNA1310_6938, RNA1509_42645} {RNA1509_42645, RNA815_5348}
31. MligTC455_07049 7 0.14 Mlig455_069079

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_069079 {REF} {Length: 1062} {Pfam: Lectin C-type domain [PF00059.23, score=20.3]} {RNA1509_20946} {RNA1310_35520} {RNA815_44391}
32. MligTC455_13160 39 0.81 Mlig455_046280

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_046280 {REF} {Length: 528} {RNA1509_12256} {RNA1310_127832} {RNA815_51385}
33. MligTC455_21765 62 1.3 Mlig455_031149

Neo: -

Age: Down-Up-Up

 STOM 0.954 - - - - 0.954 - Mlig455_031149 {REF} {Length: 2538} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=114.7]} {Human: ENSG00000148175, STOM, stomatin, [RH, Score=361, Expect=1e-124]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=347, Expect=1e-119]} {Dmel: FBgn0260657, CG42540, [RH, Score=380, Expect=3e-131]} {Celegans: WBGene00006064, sto-2, Stomatin-2, [RH, Score=385, Expect=1e-133]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=387, Expect=2e-135]} {RNA1509_9137} {RNA1310_23238} {RNA815_24338}
34. MligTC455_29834 17 0.36 Mlig455_063213

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_063213 {REF} {Length: 1127} {TRANSSPLICED} {RNA1509_20954} {RNA1310_33964.1} {RNA815_10226}
35. MligTC455_32594 15 0.32 Mlig455_032102

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_032102 {REF} {Length: 772} {RNA1310_47300.1} {RNA815_35912}
36. MligTC455_33816 53 1.11 Mlig455_022960

Neo: -

Age: -

 0.954 - - 0.954 - - - Mlig455_022960 {REF} {Length: 3036} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=42.7]} {RNA1509_16121, RNA1509_45218} {RNA1310_21438, RNA1509_45218} {RNA1509_45218, RNA815_8890.1}
37. MligTC455_46137 47 0.97 Mlig455_054506

Neo: -

Age: Down-Up-Down

 PRKCZ 0.953 - - - - 0.953 - Mlig455_054506 {REF} {Length: 2255} {Pfam: PB1 domain [PF00564.26, score=24.9]} {Human: ENSG00000067606, PRKCZ, protein kinase C zeta, [Score=77.0, Expect=1e-14]} {Mouse: ENSMUSG00000029053, Prkcz, protein kinase C, zeta, [Score=77.4, Expect=4e-15]} {Smed: dd_Smed_v6_2110_0_2, dd_Smed_v6_2110_0_2, [Score=72.4, Expect=8e-14]} {RNA1310_76564} {RNA815_47904}
38. MligTC455_20757 286 5.96 Mlig455_005125, Mlig455_005185

Neo: -

Age: -

 0.951 - - - - 0.951 -

Mlig455_005125 {REF} {Length: 1290} {RNA1310_29676.2} {RNA815_31533}

Mlig455_005185 {REF} {Length: 1357} {RNA1310_29676.1} {RNA815_31533}
39. MligTC455_29891 49 1.02 Mlig455_006434

Neo: -

Age: Up-Down-Up

 CRB2 0.951 - - - - - 0.951 Mlig455_006434 {REF} {Length: 3643} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=109.5]; Human growth factor-like EGF [PF12661.9, score=64.4]; Laminin G domain [PF02210.26, score=31.8]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=261, Expect=8e-72]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=256, Expect=6e-70]} {Dmel: FBgn0259685, crb, crumbs, [Score=235, Expect=5e-63]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=139, Expect=4e-33]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=136, Expect=3e-32]} {RNA1509_29406} {RNA1310_26279.1} {RNA815_3525.1}
40. MligTC455_22877 121 2.53 Mlig455_052516

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.506

 RAB6A 0.95 - - 0.950 - - - Mlig455_052516 {REF} {Length: 1141} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=195.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=122.5]; ADP-ribosylation factor family [PF00025.23, score=50.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=26.7]; 50S ribosome-binding GTPase [PF01926.25, score=24.7]; Elongation factor Tu GTP binding domain [PF00009.29, score=23.9]; RsgA GTPase [PF03193.18, score=21.9]; Ferrous iron transport protein B [PF02421.20, score=21.7]} {Human: ENSG00000175582, RAB6A, RAB6A, member RAS oncogene family, [Score=324, Expect=1e-113]; ENSG00000154917, RAB6B, RAB6B, member RAS oncogene family, [Score=322, Expect=4e-113]} {Mouse: ENSMUSG00000030704, Rab6a, RAB6A, member RAS oncogene family, [Score=324, Expect=7e-114]; ENSMUSG00000032549, Rab6b, RAB6B, member RAS oncogene family, [Score=322, Expect=3e-113]} {Dmel: FBgn0015797, Rab6, [Score=328, Expect=1e-115]} {Celegans: WBGene00004269, rab-6.1, Ras-related protein Rab-6.1, [RH, Score=311, Expect=3e-109]} {Smed: dd_Smed_v6_4465_0_1, dd_Smed_v6_4465_0_1, [Score=330, Expect=7e-117]} {RNA1509_20446} {RNA1310_4872.1} {RNA815_3219.2}
41. MligTC455_40031 618 12.87 Mlig455_051506, Mlig455_051543

Neo: -

Age: -

 TBX2 0.95 - - - 0.950 - -

Mlig455_051506 {REF} {Length: 3347} {Pfam: T-box [PF00907.24, score=272.0]} {Human: ENSG00000121068, TBX2, T-box 2, [RH, Score=377, Expect=2e-119]; ENSG00000135111, TBX3, T-box 3, [RH, Score=367, Expect=1e-115]} {Mouse: ENSMUSG00000018604, Tbx3, T-box 3, [RH, Score=376, Expect=3e-119]; ENSMUSG00000000093, Tbx2, T-box 2, [RH, Score=375, Expect=9e-119]} {Dmel: FBgn0000179, bi, bifid, [RH, Score=359, Expect=2e-110]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [RH, Score=331, Expect=7e-106]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [RH, Score=404, Expect=3e-131]} {RNA1509_33164} {RNA1310_6016} {RNA815_26812}

Mlig455_051543 {REF} {Length: 3407} {Pfam: T-box [PF00907.24, score=272.0]} {Human: ENSG00000121068, TBX2, T-box 2, [RH, Score=377, Expect=1e-119]; ENSG00000135111, TBX3, T-box 3, [RH, Score=367, Expect=1e-115]} {Mouse: ENSMUSG00000018604, Tbx3, T-box 3, [RH, Score=376, Expect=3e-119]; ENSMUSG00000000093, Tbx2, T-box 2, [RH, Score=374, Expect=1e-118]} {Dmel: FBgn0000179, bi, bifid, [RH, Score=359, Expect=1e-110]} {Celegans: WBGene00006543, tbx-2, T-box protein 2, [RH, Score=331, Expect=7e-106]} {Smed: dd_Smed_v6_11693_0_1, dd_Smed_v6_11693_0_1, [RH, Score=404, Expect=2e-131]} {RNA1509_33164} {RNA1310_6016, RNA1509_33164} {RNA1509_33164, RNA815_26812}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA