TomoSeq data search

Data search

Results for MligTC455_16268

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16268

2679

55.81

Mlig455_018210

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.870

SUGT1

Mlig455_018210 {REF} {Length: 1065} {TRANSSPLICED} {Pfam: SGS domain [PF05002.17, score=111.2]; CS domain [PF04969.18, score=25.7]} {Human: ENSG00000165416, SUGT1, SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, [RH, Score=127, Expect=1e-34]} {Mouse: ENSMUSG00000022024, Sugt1, SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), [RH, Score=131, Expect=2e-36]} {Dmel: FBgn0265101, Sgt1, suppressor-of-G2-allele-of-skp1, [RH, Score=116, Expect=2e-32]} {Celegans: WBGene00008371, D1054.3, [RH, Score=120, Expect=9e-34]} {Smed: dd_Smed_v6_3826_0_1, dd_Smed_v6_3826_0_1, [RH, Score=118, Expect=3e-33]} {RNA1509_14874} {RNA1310_20250} {RNA815_14921}

Cumulative graph for MligTC455_16268

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.715	5.963	0.00013	0.03568
RegionR2	0.187	5.963	0.59002	0.94377
RegionR3	0.308	5.963	0.30591	0.84613
RegionR4	0.752	5.963	0.02218	0.10982
RegionR5	0.743	5.963	0.00701	0.04462
RegionR6	0.699	5.963	0.01560	0.21908
RegionR7	0.688	5.963	0.03530	0.35780
RegionR8	0.338	5.963	0.38444	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.012	5.963	0.55360	1.00000
RegenerationR2	0.164	5.963	0.55137	0.89410
RegenerationR3	0.402	5.963	0.17792	0.61322
RegenerationR4	0.356	5.963	0.24245	0.69064
RegenerationR5	0.241	5.963	0.39504	0.79493
RegenerationR6	0.335	5.963	0.25687	0.60698
RegenerationBL	0.26	5.963	0.36920	0.73748
RegenerationTP	0.485	5.963	0.12358	0.53346

Genes with expression patterns similar to MligTC455_16268

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16268	2679	55.81	Mlig455_018210	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.870	SUGT1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_018210 {REF} {Length: 1065} {TRANSSPLICED} {Pfam: SGS domain [PF05002.17, score=111.2]; CS domain [PF04969.18, score=25.7]} {Human: ENSG00000165416, SUGT1, SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, [RH, Score=127, Expect=1e-34]} {Mouse: ENSMUSG00000022024, Sugt1, SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), [RH, Score=131, Expect=2e-36]} {Dmel: FBgn0265101, Sgt1, suppressor-of-G2-allele-of-skp1, [RH, Score=116, Expect=2e-32]} {Celegans: WBGene00008371, D1054.3, [RH, Score=120, Expect=9e-34]} {Smed: dd_Smed_v6_3826_0_1, dd_Smed_v6_3826_0_1, [RH, Score=118, Expect=3e-33]} {RNA1509_14874} {RNA1310_20250} {RNA815_14921}
2.	MligTC455_16267	2598	54.13	Mlig455_008544	Neo: - Age: -	SUGT1	5.902	0.985	0.994	0.996	0.997	0.998	0.932	Mlig455_008544 {REF} {Length: 1065} {TRANSSPLICED} {Pfam: SGS domain [PF05002.17, score=111.3]; CS domain [PF04969.18, score=24.9]} {Human: ENSG00000165416, SUGT1, SGT1 homolog, MIS12 kinetochore complex assembly cochaperone, [RH, Score=125, Expect=4e-34]} {Mouse: ENSMUSG00000022024, Sugt1, SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae), [RH, Score=130, Expect=8e-36]} {Dmel: FBgn0265101, Sgt1, suppressor-of-G2-allele-of-skp1, [RH, Score=117, Expect=7e-33]} {Celegans: WBGene00008371, D1054.3, [RH, Score=120, Expect=5e-34]} {Smed: dd_Smed_v6_3826_0_1, dd_Smed_v6_3826_0_1, [RH, Score=115, Expect=2e-32]} {RNA1509_14874, RNA1509_3985, RNA1509_56406} {RNA1310_20250, RNA1509_14874, RNA1509_3985, RNA1509_56406} {RNA1509_14874, RNA1509_3985, RNA1509_56406, RNA815_14921}
3.	MligTC455_23363	1562	32.54	Mlig455_010054, Mlig455_063266	Neo: Irradiation Age: - Region-enriched R5: 1.935/0.00000 Region-enriched R4: 1.282/0.00824 Regeneration-upregulated TP: 2.464 Regeneration-enriched TP: 2.464	NAP1L4	0.979	-	-	-	0.979	-	-	Mlig455_010054 {REF} {Length: 2383} {TRANSSPLICED} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=311.0]} {Human: ENSG00000205531, NAP1L4, nucleosome assembly protein 1 like 4, [Score=272, Expect=5e-85]; ENSG00000273562, NAP1L4, nucleosome assembly protein 1 like 4, [Score=272, Expect=5e-85]; ENSG00000187109, NAP1L1, nucleosome assembly protein 1 like 1, [Score=271, Expect=3e-84]} {Mouse: ENSMUSG00000059119, Nap1l4, nucleosome assembly protein 1-like 4, [Score=281, Expect=1e-88]; ENSMUSG00000058799, Nap1l1, nucleosome assembly protein 1-like 1, [Score=271, Expect=1e-84]} {Dmel: FBgn0015268, Nap1, Nucleosome assembly protein 1, [Score=256, Expect=2e-79]} {Celegans: WBGene00017075, nap-1, Nucleosome Assembly Protein, [Score=196, Expect=3e-57]} {Smed: dd_Smed_v6_997_0_1, dd_Smed_v6_997_0_1, [Score=290, Expect=2e-92]} {RNA1509_37542} {RNA1310_23422} {RNA815_10704} Mlig455_063266 {REF} {Length: 2409} {TRANSSPLICED} {Pfam: Nucleosome assembly protein (NAP) [PF00956.20, score=310.8]} {Human: ENSG00000273562, NAP1L4, nucleosome assembly protein 1 like 4, [Score=268, Expect=3e-83]; ENSG00000205531, NAP1L4, nucleosome assembly protein 1 like 4, [Score=268, Expect=3e-83]; ENSG00000187109, NAP1L1, nucleosome assembly protein 1 like 1, [Score=264, Expect=1e-81]} {Mouse: ENSMUSG00000059119, Nap1l4, nucleosome assembly protein 1-like 4, [Score=277, Expect=6e-87]; ENSMUSG00000058799, Nap1l1, nucleosome assembly protein 1-like 1, [Score=265, Expect=5e-82]} {Dmel: FBgn0015268, Nap1, Nucleosome assembly protein 1, [Score=254, Expect=2e-78]} {Celegans: WBGene00017075, nap-1, Nucleosome Assembly Protein, [Score=193, Expect=5e-56]} {Smed: dd_Smed_v6_997_0_1, dd_Smed_v6_997_0_1, [Score=282, Expect=2e-89]} {RNA1509_22373, RNA1509_40649} {RNA1310_23422, RNA1509_22373} {RNA1509_22373, RNA815_10704}
4.	MligTC455_45660	1995	41.57	Mlig455_023892, Mlig455_048661	Neo: - Age: - Region-enriched R4: 1.809/0.00017	ABHD17C	0.952	-	-	0.952	-	-	-	Mlig455_023892 {REF} {Length: 3449} {TRANSSPLICED} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=48.2]; Alpha/beta hydrolase family [PF12697.9, score=23.0]; alpha/beta hydrolase fold [PF00561.22, score=19.7]} {Human: ENSG00000136379, ABHD17C, abhydrolase domain containing 17C, [Score=346, Expect=4e-118]; ENSG00000129968, ABHD17A, abhydrolase domain containing 17A, [Score=340, Expect=4e-116]; ENSG00000107362, ABHD17B, abhydrolase domain containing 17B, [Score=335, Expect=4e-114]} {Mouse: ENSMUSG00000038459, Abhd17c, abhydrolase domain containing 17C, [Score=348, Expect=4e-119]; ENSMUSG00000003346, Abhd17a, abhydrolase domain containing 17A, [Score=338, Expect=2e-115]; ENSMUSG00000047368, Abhd17b, abhydrolase domain containing 17B, [Score=333, Expect=1e-113]} {Dmel: FBgn0053096, CG33096, [Score=329, Expect=2e-112]} {Celegans: WBGene00045192, aho-3, [Score=330, Expect=3e-112]} {Smed: dd_Smed_v6_8263_0_1, dd_Smed_v6_8263_0_1, [Score=294, Expect=2e-98]} {RNA1509_4228} {RNA1310_10318} {RNA815_10244.1} Mlig455_048661 {REF} {Length: 3448} {TRANSSPLICED} {Pfam: Serine aminopeptidase, S33 [PF12146.10, score=48.2]; Alpha/beta hydrolase family [PF12697.9, score=23.0]; alpha/beta hydrolase fold [PF00561.22, score=19.7]} {Human: ENSG00000136379, ABHD17C, abhydrolase domain containing 17C, [Score=346, Expect=4e-118]; ENSG00000129968, ABHD17A, abhydrolase domain containing 17A, [Score=340, Expect=4e-116]; ENSG00000107362, ABHD17B, abhydrolase domain containing 17B, [Score=335, Expect=4e-114]} {Mouse: ENSMUSG00000038459, Abhd17c, abhydrolase domain containing 17C, [Score=348, Expect=4e-119]; ENSMUSG00000003346, Abhd17a, abhydrolase domain containing 17A, [Score=338, Expect=2e-115]; ENSMUSG00000047368, Abhd17b, abhydrolase domain containing 17B, [Score=333, Expect=1e-113]} {Dmel: FBgn0053096, CG33096, [Score=329, Expect=2e-112]} {Celegans: WBGene00045192, aho-3, [Score=330, Expect=3e-112]} {Smed: dd_Smed_v6_8263_0_1, dd_Smed_v6_8263_0_1, [Score=294, Expect=2e-98]} {RNA1509_21953, RNA1509_40429, RNA1509_4228, RNA1509_49776, RNA1509_54437} {RNA1310_10318, RNA1509_21953, RNA1509_40429, RNA1509_4228, RNA1509_49776, RNA1509_54437} {RNA1509_21953, RNA1509_40429, RNA1509_4228, RNA1509_49776, RNA1509_54437, RNA815_10244.1}

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