M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_16776

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16776 1291 26.89 Mlig455_015784

Neo: -

Age: -

Region-enriched R2: 1.123/0.04261

 DYNLL1 Mlig455_015784 {REF} {Length: 1376} {Pfam: Dynein light chain type 1 [PF01221.20, score=79.4]; EF-hand domain [PF13405.8, score=38.0]; EF hand [PF00036.34, score=37.7]; EF hand [PF13202.8, score=36.5]; EF-hand domain pair [PF13499.8, score=33.2]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=67.4, Expect=1e-14]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=65.9, Expect=3e-14]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=67.4, Expect=7e-15]; ENSMUSG00000064063, BC048507, cDNA sequence BC048507, [Score=66.2, Expect=2e-14]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=65.9, Expect=2e-14]} {Dmel: FBgn0011760, ctp, cut up, [Score=64.7, Expect=5e-14]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=67.4, Expect=4e-15]} {Smed: dd_Smed_v6_17388_0_1, dd_Smed_v6_17388_0_1, [RH, Score=176, Expect=1e-56]} {RNA1509_8572} {RNA1310_5370, RNA1509_8572} {RNA1509_8572, RNA815_1639}

Cumulative graph for MligTC455_16776

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.035 4.832 0.23205 0.87519
RegionR2 1.123 4.832 0.00265 0.04261
RegionR3 0.244 4.832 0.46473 0.97296
RegionR4 0.231 4.832 0.55206 0.87242
RegionR5 -0.606 4.832 0.08196 0.26661
RegionR6 0.23 4.832 0.50165 1.00000
RegionR7 -0.121 4.832 0.77894 1.00000
RegionR8 -0.066 4.832 0.89728 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.935 4.832 0.37473 1.00000
RegenerationR2 -0.518 4.832 0.15152 0.58561
RegenerationR3 -0.215 4.832 0.58546 0.90133
RegenerationR4 -0.32 4.832 0.42189 0.82644
RegenerationR5 -0.663 4.832 0.10659 0.49412
RegenerationR6 -0.455 4.832 0.27283 0.62273
RegenerationBL -0.094 4.832 0.82758 1.00000
RegenerationTP 0.115 4.832 0.80479 1.00000


Genes with expression patterns similar to MligTC455_16776

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16776 1291 26.89 Mlig455_015784

Neo: -

Age: -

Region-enriched R2: 1.123/0.04261

 DYNLL1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_015784 {REF} {Length: 1376} {Pfam: Dynein light chain type 1 [PF01221.20, score=79.4]; EF-hand domain [PF13405.8, score=38.0]; EF hand [PF00036.34, score=37.7]; EF hand [PF13202.8, score=36.5]; EF-hand domain pair [PF13499.8, score=33.2]} {Human: ENSG00000088986, DYNLL1, dynein light chain LC8-type 1, [Score=67.4, Expect=1e-14]; ENSG00000264364, DYNLL2, dynein light chain LC8-type 2, [Score=65.9, Expect=3e-14]} {Mouse: ENSMUSG00000009013, Dynll1, dynein light chain LC8-type 1, [Score=67.4, Expect=7e-15]; ENSMUSG00000064063, BC048507, cDNA sequence BC048507, [Score=66.2, Expect=2e-14]; ENSMUSG00000020483, Dynll2, dynein light chain LC8-type 2, [Score=65.9, Expect=2e-14]} {Dmel: FBgn0011760, ctp, cut up, [Score=64.7, Expect=5e-14]} {Celegans: WBGene00001005, dlc-1, Dynein light chain 1, cytoplasmic, [Score=67.4, Expect=4e-15]} {Smed: dd_Smed_v6_17388_0_1, dd_Smed_v6_17388_0_1, [RH, Score=176, Expect=1e-56]} {RNA1509_8572} {RNA1310_5370, RNA1509_8572} {RNA1509_8572, RNA815_1639}
2. MligTC455_41880 1136 23.67 Mlig455_013517

Neo: -

Age: -

 3.296 0.788 - - 0.743 0.792 0.973 Mlig455_013517 {REF} {Length: 2631} {Smed: dd_Smed_v6_13043_0_1, dd_Smed_v6_13043_0_1, [RH, Score=299, Expect=4e-91]} {RNA1509_15478, RNA1509_18670} {RNA1310_7739.1, RNA1509_15478, RNA1509_18670} {RNA1509_15478, RNA1509_18670, RNA815_2588}
3. MligTC455_42604 1501 31.27 Mlig455_050777

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.494

Region-enriched R4: 1.958/0.00766

 2.638 - - - 0.845 0.843 0.950 Mlig455_050777 {REF} {Length: 1833} {Pfam: Sleepless protein [PF17064.7, score=31.0]} {Dmel: FBgn0033872, CG6329, [RH, Score=55.8, Expect=3e-10]} {Smed: dd_Smed_v6_780_0_1, dd_Smed_v6_780_0_1, [RH, Score=57.0, Expect=7e-11]} {RNA1509_1909} {RNA1310_24118} {RNA815_21128}
4. MligTC455_33359 564 11.76 Mlig455_016899, Mlig455_021097, Mlig455_034669, Mlig455_034718, Mlig455_067585

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.438

 NYNRIN 2.594 0.880 - - 0.961 0.753 -

Mlig455_016899 {REF} {Length: 2270} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=122.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=115.1]; Integrase zinc binding domain [PF17921.3, score=46.9]; Integrase core domain [PF00665.28, score=22.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=9e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=85.9, Expect=1e-16]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=162, Expect=2e-41]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}

Mlig455_021097 {REF} {Length: 3431} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=78.1]; Integrase core domain [PF00665.28, score=50.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.3]; Aspartyl protease [PF13650.8, score=19.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=126, Expect=1e-28]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [RH, Score=127, Expect=6e-29]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=435, Expect=1e-134]} {RNA1509_26990} {RNA1310_6256} {RNA815_10502}

Mlig455_034669 {REF} {Length: 2281} {Pfam: Tyrosine phosphatase family [PF13350.8, score=55.4]} {RNA1509_26990} {RNA1310_23986} {RNA815_5648}

Mlig455_034718 {REF} {Length: 7582} {Pfam: Tyrosine phosphatase family [PF13350.8, score=54.5]} {RNA1509_26990} {RNA1310_14181.1} {RNA815_5648}

Mlig455_067585 {REF} {Length: 4384} {Pfam: Tyrosine phosphatase family [PF13350.8, score=54.5]} {RNA1509_26990} {RNA1310_23986} {RNA815_5648}
5. MligTC455_47670 709 14.77 Mlig455_064585

Neo: -

Age: -

Region-enriched R2: 1.616/0.00648

 2.591 0.841 - 0.761 0.989 - - Mlig455_064585 {REF} {Length: 1016} {RNA1509_15853} {RNA1310_37053} {RNA815_24569.1}
6. MligTC455_46654 2137 44.52 Mlig455_051380

Neo: -

Age: Down-Up-Down

 EPS8L2 2.577 - - - 0.896 0.728 0.953 Mlig455_051380 {REF} {Length: 3696} {TRANSSPLICED} {Pfam: Phosphotyrosine-binding domain [PF08416.15, score=42.1]; SH3 domain [PF00018.30, score=23.9]} {Human: ENSG00000177106, EPS8L2, EPS8 like 2, [RH, Score=158, Expect=5e-40]; ENSG00000151491, EPS8, epidermal growth factor receptor pathway substrate 8, [RH, Score=153, Expect=5e-38]} {Mouse: ENSMUSG00000015766, Eps8, epidermal growth factor receptor pathway substrate 8, [RH, Score=159, Expect=6e-40]; ENSMUSG00000025504, Eps8l2, EPS8-like 2, [RH, Score=154, Expect=8e-39]} {Dmel: FBgn0029095, aru, arouser, [RH, Score=161, Expect=4e-41]} {Celegans: WBGene00001330, eps-8, EPS (Human endocytosis) related; Epidermal growth factor receptor pathway substrate 8 splice variant A, [RH, Score=215, Expect=7e-60]} {Smed: dd_Smed_v6_4256_0_1, dd_Smed_v6_4256_0_1, [RH, Score=79.0, Expect=4e-15]} {RNA1509_4398} {RNA1310_3514} {RNA815_6294}
7. MligTC455_47669 793 16.52 Mlig455_040755

Neo: -

Age: -

Region-enriched R2: 1.568/0.00407

 2.544 0.795 - 0.769 0.980 - - Mlig455_040755 {REF} {Length: 8844} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=33.0]; Ankyrin repeats (many copies) [PF13637.8, score=21.8]} {RNA1509_15853} {RNA1310_18916} {RNA815_34185}
8. MligTC455_07754 1866 38.87 Mlig455_013007, Mlig455_013037

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.474

 ANK3, FPGT-TNNI3K 2.485 0.819 - - 0.951 - 0.715

Mlig455_013007 {REF} {Length: 3223} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=109.8]; Ankyrin repeats (many copies) [PF13637.8, score=82.3]; Ankyrin repeats (many copies) [PF13857.8, score=62.3]; Ankyrin repeat [PF13606.8, score=59.9]; Ankyrin repeat [PF00023.32, score=48.2]; DHHC palmitoyltransferase [PF01529.22, score=26.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=80.5, Expect=8e-15]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=79.7, Expect=8e-15]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=71.2, Expect=2e-12]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=69.3, Expect=8e-12]} {Smed: dd_Smed_v6_11895_0_1, dd_Smed_v6_11895_0_1, [Score=147, Expect=2e-37]} {RNA1509_18630, RNA1509_25673, RNA1509_41501} {RNA1310_9503, RNA1509_25673, RNA1509_41501} {RNA1509_25673, RNA1509_41501, RNA815_7486}

Mlig455_013037 {REF} {Length: 4204} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=64.2]; Ankyrin repeats (many copies) [PF13637.8, score=54.3]; Ankyrin repeats (many copies) [PF13857.8, score=45.6]; Ankyrin repeat [PF00023.32, score=38.8]; Ankyrin repeat [PF13606.8, score=34.2]; DHHC palmitoyltransferase [PF01529.22, score=25.2]} {Human: ENSG00000259030, FPGT-TNNI3K, FPGT-TNNI3K readthrough, [Score=84.0, Expect=7e-16]; ENSG00000116783, TNNI3K, TNNI3 interacting kinase, [Score=83.6, Expect=1e-15]} {Mouse: ENSMUSG00000040086, Tnni3k, TNNI3 interacting kinase, [Score=79.7, Expect=9e-15]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=61.6, Expect=4e-09]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=60.5, Expect=6e-09]} {Smed: dd_Smed_v6_11895_0_1, dd_Smed_v6_11895_0_1, [Score=120, Expect=3e-28]} {RNA1509_18630} {RNA1310_9503} {RNA815_7486}
9. MligTC455_22285 679 14.14 Mlig455_019090, Mlig455_064274

Neo: -

Age: -

Region-enriched R2: 1.663/0.01632

 INVS 1.837 - - - 0.879 - 0.958

Mlig455_019090 {REF} {Length: 5312} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=202.1]; Ankyrin repeats (many copies) [PF13637.8, score=171.0]; Ankyrin repeat [PF00023.32, score=132.7]; Ankyrin repeat [PF13606.8, score=120.3]; Ankyrin repeats (many copies) [PF13857.8, score=107.4]} {Human: ENSG00000119509, INVS, inversin, [Score=155, Expect=1e-37]; ENSG00000151150, ANK3, ankyrin 3, [Score=152, Expect=4e-36]} {Mouse: ENSMUSG00000028344, Invs, inversin, [Score=156, Expect=5e-38]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=152, Expect=3e-36]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=149, Expect=1e-35]} {Dmel: FBgn0260487, CG42534, [RH, Score=293, Expect=1e-80]} {Celegans: WBGene00021304, nphp-2, NePHronoPhthisis (Human kidney disease) homolog, [RH, Score=176, Expect=9e-45]} {Smed: dd_Smed_v6_16174_0_1, dd_Smed_v6_16174_0_1, [RH, Score=471, Expect=3e-145]} {RNA1509_45730, RNA1509_6692} {RNA1310_1162.1, RNA1509_45730, RNA1509_6692} {RNA1509_45730, RNA1509_6692, RNA815_2654}

Mlig455_064274 {REF} {Length: 5181} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=202.3]; Ankyrin repeats (many copies) [PF13637.8, score=171.3]; Ankyrin repeat [PF00023.32, score=133.2]; Ankyrin repeat [PF13606.8, score=120.8]; Ankyrin repeats (many copies) [PF13857.8, score=107.9]} {Human: ENSG00000119509, INVS, inversin, [Score=155, Expect=1e-37]; ENSG00000151150, ANK3, ankyrin 3, [Score=151, Expect=6e-36]} {Mouse: ENSMUSG00000028344, Invs, inversin, [Score=156, Expect=6e-38]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=151, Expect=4e-36]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=149, Expect=1e-35]} {Dmel: FBgn0260487, CG42534, [RH, Score=293, Expect=1e-80]} {Celegans: WBGene00021304, nphp-2, NePHronoPhthisis (Human kidney disease) homolog, [RH, Score=176, Expect=8e-45]} {Smed: dd_Smed_v6_16174_0_1, dd_Smed_v6_16174_0_1, [RH, Score=471, Expect=2e-145]} {RNA1509_6692} {RNA1310_1162.1} {RNA815_2654}
10. MligTC455_27440 207 4.31 Mlig455_050456

Neo: -

Age: -

 DCDC1 1.751 - - 0.793 0.958 - - Mlig455_050456 {REF} {Length: 5764} {Pfam: Cep120 protein [PF12416.10, score=40.9]} {Human: ENSG00000170959, DCDC1, doublecortin domain containing 1, [Score=90.1, Expect=9e-18]} {Smed: dd_Smed_v6_11770_0_1, dd_Smed_v6_11770_0_1, [Score=57.8, Expect=3e-08]} {RNA1509_9003} {RNA1310_581.1} {RNA815_1282}
11. MligTC455_51933 583 12.15 Mlig455_024511

Neo: -

Age: logFC(26M/2M)=-0.429

Region-enriched R2: 2.089/0.00081

 CBSL 1.751 0.801 - - 0.950 - - Mlig455_024511 {REF} {Length: 1959} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=138.0]; CBS domain [PF00571.30, score=48.9]} {Human: ENSG00000274276, CBSL, cystathionine-beta-synthase like, [Score=463, Expect=3e-160]; ENSG00000160200, CBS, cystathionine-beta-synthase, [Score=463, Expect=3e-160]} {Mouse: ENSMUSG00000024039, Cbs, cystathionine beta-synthase, [Score=467, Expect=6e-162]} {Dmel: FBgn0031148, Cbs, centrosomin's beautiful sister, [Score=327, Expect=2e-107]} {Celegans: WBGene00013866, cbs-1, Cystathionine Beta-Synthase, [Score=264, Expect=2e-81]} {Smed: dd_Smed_v6_1585_0_1, dd_Smed_v6_1585_0_1, [Score=511, Expect=6e-180]} {RNA1509_36721} {RNA1310_10809} {RNA815_3797.1}
12. MligTC455_39613 739 15.39 Mlig455_049607

Neo: -

Age: -

 CIC 1.741 - - - 0.953 - 0.788 Mlig455_049607 {REF} {Length: 6015} {TRANSSPLICED} {Pfam: HMG (high mobility group) box [PF00505.21, score=68.1]; Domain of unknown function (DUF4819) [PF16090.7, score=41.4]; HMG-box domain [PF09011.12, score=36.1]} {Human: ENSG00000079432, CIC, capicua transcriptional repressor, [RH, Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000005442, Cic, capicua transcriptional repressor, [RH, Score=112, Expect=8e-25]} {Dmel: FBgn0262582, cic, capicua, [RH, Score=103, Expect=5e-22]} {Celegans: WBGene00001560, gei-3, GEX Interacting protein, [RH, Score=103, Expect=3e-22]} {Smed: dd_Smed_v6_4601_0_1, dd_Smed_v6_4601_0_1, [RH, Score=103, Expect=3e-22]} {RNA1509_21240, RNA1509_23108, RNA1509_23279, RNA1509_31171} {RNA1310_3975.1, RNA1509_21240, RNA1509_23108, RNA1509_23279, RNA1509_31171} {RNA1509_21240, RNA1509_23108, RNA1509_23279, RNA1509_31171, RNA815_15826}
13. MligTC455_13047 662 13.78 Mlig455_043461

Neo: -

Age: -

Region-enriched R6: 1.614/0.00009

 1.735 - - - 0.768 - 0.967 Mlig455_043461 {REF} {Length: 3112} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=48.4]; Lipoma HMGIC fusion partner-like protein [PF10242.11, score=24.0]} {Dmel: FBgn0010894, sinu, sinuous, [RH, Score=100, Expect=4e-25]} {Smed: dd_Smed_v6_2132_0_1, dd_Smed_v6_2132_0_1, [RH, Score=201, Expect=8e-64]} {RNA1509_30798, RNA1509_31427, RNA1509_60124} {RNA1310_20953.2, RNA1509_30798, RNA1509_31427, RNA1509_60124} {RNA1509_30798, RNA1509_31427, RNA1509_60124, RNA815_18897.1}
14. MligTC455_18647 1244 25.91 Mlig455_063436

Neo: -

Age: -

 1.706 - - - 0.968 - 0.738 Mlig455_063436 {REF} {Length: 1503} {Pfam: BTB/POZ domain [PF00651.33, score=34.7]} {RNA1509_43600, RNA1509_45066} {RNA1310_23212, RNA1509_43600, RNA1509_45066} {RNA1509_43600, RNA1509_45066, RNA815_2283.1}
15. MligTC455_29050 162 3.38 Mlig455_004578

Neo: -

Age: -

 TMEM30A 1.686 - - - 0.952 0.734 - Mlig455_004578 {REF} {Length: 3215} {TRANSSPLICED} {Pfam: LEM3 (ligand-effect modulator 3) family / CDC50 family [PF03381.17, score=266.2]} {Human: ENSG00000112697, TMEM30A, transmembrane protein 30A, [Score=210, Expect=3e-64]} {Mouse: ENSMUSG00000032328, Tmem30a, transmembrane protein 30A, [Score=214, Expect=4e-66]} {Dmel: FBgn0030752, CG9947, [Score=253, Expect=1e-81]} {Celegans: WBGene00019946, chat-1, CDC50 family protein chat-1, [Score=218, Expect=8e-68]} {Smed: dd_Smed_v6_6430_0_1, dd_Smed_v6_6430_0_1, [Score=258, Expect=9e-84]} {RNA1509_38539} {RNA1310_9371} {RNA815_12157}
16. MligTC455_32268 289 6.01 Mlig455_033434

Neo: -

Age: -

 HMCN1 1.677 - - 0.716 - - 0.961 Mlig455_033434 {REF} {Length: 3936} {Pfam: Immunoglobulin domain [PF13927.8, score=169.9]; Immunoglobulin domain [PF13895.8, score=147.3]; Immunoglobulin I-set domain [PF07679.18, score=142.5]; Immunoglobulin domain [PF00047.27, score=108.6]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=50.3]; Immunoglobulin V-set domain [PF07686.19, score=35.9]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=27.3]; Fibronectin type III domain [PF00041.23, score=25.0]; Immunoglobulin domain [PF18452.3, score=18.9]} {Human: ENSG00000143341, HMCN1, hemicentin 1, [Score=133, Expect=8e-31]} {Mouse: ENSMUSG00000066842, Hmcn1, hemicentin 1, [Score=141, Expect=2e-33]} {Dmel: FBgn0000547, ed, echinoid, [RH, Score=248, Expect=1e-67]} {Celegans: WBGene00001863, him-4, Hemicentin; High Incidence of Males (Increased X chromosome loss), [Score=134, Expect=1e-31]} {Smed: dd_Smed_v6_13903_0_1, dd_Smed_v6_13903_0_1, [RH, Score=202, Expect=2e-53]} {RNA1509_34913} {RNA1310_1330.1, RNA1509_34913} {RNA1509_34913, RNA815_5998}
17. MligTC455_45781 345 7.19 Mlig455_035300

Neo: -

Age: logFC(26M/2M)=0.368

 1.676 - - - - 0.724 0.952 Mlig455_035300 {REF} {Length: 3621} {RNA1509_51038} {RNA1310_7872.1} {RNA815_15245}
18. MligTC455_31296 390 8.12 Mlig455_011781

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.545

 1.652 - - - 0.701 - 0.951 Mlig455_011781 {REF} {Length: 941} {RNA1509_29951} {RNA1310_14610.1} {RNA815_17373}
19. MligTC455_49457 1225 25.52 Mlig455_005617, Mlig455_014432, Mlig455_070181

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.375

 0.974 - - - 0.974 - -

Mlig455_005617 {REF} {Length: 1304} {RNA1509_48463} {RNA1310_46663, RNA1509_48463} {RNA1509_48463, RNA815_4404.1}

Mlig455_014432 {REF} {Length: 1338} {RNA1509_48463} {RNA1310_46663} {RNA815_4404.1}

Mlig455_070181 {REF} {Length: 1176} {RNA1509_47545, RNA1509_48463} {RNA1310_46663, RNA1509_47545} {RNA1509_47545, RNA815_4404.1}
20. MligTC455_29289 336 7 Mlig455_052963

Neo: -

Age: -

 RHBDL2 0.972 - - - - - 0.972 Mlig455_052963 {REF} {Length: 2579} {Pfam: Rhomboid family [PF01694.24, score=107.3]; EF-hand domain pair [PF13499.8, score=21.5]; EF hand [PF00036.34, score=19.7]} {Human: ENSG00000158315, RHBDL2, rhomboid like 2, [Score=158, Expect=1e-43]; ENSG00000141314, RHBDL3, rhomboid like 3, [Score=153, Expect=6e-41]} {Mouse: ENSMUSG00000043333, Rhbdl2, rhomboid like 2, [Score=169, Expect=9e-48]} {Dmel: FBgn0030318, rho-4, rhomboid-4, [Score=163, Expect=1e-44]} {Celegans: WBGene00004400, rom-1, Rhomboid-related protein 1, [Score=158, Expect=2e-43]} {Smed: dd_Smed_v6_13835_0_1, dd_Smed_v6_13835_0_1, [Score=304, Expect=2e-98]} {RNA1509_2577} {RNA1310_13375} {RNA815_2003.1}
21. MligTC455_30557 992 20.67 Mlig455_052024, Mlig455_057243

Neo: Irradiation

Age: -

Region-enriched R5: 1.758/0.00050

 PIGW 0.962 - - - 0.962 - -

Mlig455_052024 {REF} {Length: 3068} {Pfam: GWT1 [PF06423.14, score=46.5]} {Human: ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=97.8, Expect=7e-21]; ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=97.8, Expect=7e-21]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=103, Expect=5e-23]} {Dmel: FBgn0031422, PIG-Wa, Phosphatidylinositol glycan anchor biosynthesis class W a, [Score=96.3, Expect=8e-21]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=95.9, Expect=1e-20]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=92.4, Expect=8e-20]} {RNA1509_28166} {RNA1310_10267.1} {RNA815_4044}

Mlig455_057243 {REF} {Length: 2737} {Pfam: GWT1 [PF06423.14, score=47.3]} {Human: ENSG00000277161, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=95.9, Expect=3e-20]; ENSG00000275600, PIGW, phosphatidylinositol glycan anchor biosynthesis class W, [Score=95.9, Expect=3e-20]} {Mouse: ENSMUSG00000045140, Pigw, phosphatidylinositol glycan anchor biosynthesis, class W, [Score=103, Expect=7e-23]} {Dmel: FBgn0035265, PIG-Wb, Phosphatidylinositol glycan anchor biosynthesis class W b, [Score=96.7, Expect=7e-21]} {Celegans: WBGene00022447, hpo-20, Phosphatidylinositol-glycan biosynthesis class W protein, [Score=95.5, Expect=1e-20]} {Smed: dd_Smed_v6_14190_0_1, dd_Smed_v6_14190_0_1, [Score=95.5, Expect=8e-21]} {RNA1509_28166} {RNA1310_10267.1} {RNA815_4044}
22. MligTC455_34895 320 6.66 Mlig455_041148

Neo: -

Age: Up-Down-Down

 0.962 - - - - - 0.962 Mlig455_041148 {REF} {Length: 6869} {TRANSSPLICED} {Pfam: Fibronectin type III domain [PF00041.23, score=34.4]; Scramblase [PF03803.17, score=18.5]} {Smed: dd_Smed_v6_66647_0_1, dd_Smed_v6_66647_0_1, [Score=113, Expect=6e-28]} {RNA1509_18182} {RNA1310_652.1} {RNA815_333}
23. MligTC455_38635 274 5.71 Mlig455_003560

Neo: -

Age: logFC(26M/2M)=-0.246

 GLS 0.961 - - - - - 0.961 Mlig455_003560 {REF} {Length: 3946} {Pfam: Glutaminase [PF04960.17, score=379.9]; EF-hand domain [PF17959.3, score=64.5]; Ankyrin repeats (many copies) [PF13637.8, score=41.8]; Ankyrin repeats (3 copies) [PF12796.9, score=39.9]; Ankyrin repeats (many copies) [PF13857.8, score=28.6]; Ankyrin repeat [PF13606.8, score=27.7]; Ankyrin repeat [PF00023.32, score=21.8]} {Human: ENSG00000115419, GLS, glutaminase, [RH, Score=577, Expect=0.0]; ENSG00000135423, GLS2, glutaminase 2, [RH, Score=575, Expect=0.0]} {Mouse: ENSMUSG00000026103, Gls, glutaminase, [RH, Score=579, Expect=0.0]; ENSMUSG00000044005, Gls2, glutaminase 2 (liver, mitochondrial), [RH, Score=575, Expect=0.0]} {Dmel: FBgn0261625, GLS, Glutaminase, [Score=564, Expect=0.0]} {Celegans: WBGene00008435, glna-2, Putative glutaminase 2, [Score=518, Expect=8e-178]} {Smed: dd_Smed_v6_15097_0_1, dd_Smed_v6_15097_0_1, [Score=451, Expect=2e-154]} {RNA1509_12575} {RNA1310_9764.1} {RNA815_4546}
24. MligTC455_48687 840 17.5 Mlig455_062616

Neo: -

Age: Down-Up-Down

 PDXDC1 0.959 - - - 0.959 - - Mlig455_062616 {REF} {Length: 2728} {TRANSSPLICED} {Human: ENSG00000179889, PDXDC1, pyridoxal dependent decarboxylase domain containing 1, [Score=124, Expect=8e-29]; ENSG00000275498, PDXDC1, pyridoxal dependent decarboxylase domain containing 1, [Score=124, Expect=8e-29]} {Mouse: ENSMUSG00000022680, Pdxdc1, pyridoxal-dependent decarboxylase domain containing 1, [Score=126, Expect=8e-30]} {Dmel: FBgn0031174, CG1486, [RH, Score=119, Expect=2e-27]} {Celegans: WBGene00007593, C14H10.3, [Score=99.4, Expect=3e-21]} {Smed: dd_Smed_v6_8663_0_1, dd_Smed_v6_8663_0_1, [Score=159, Expect=2e-40]} {RNA1509_14573, RNA1509_30353} {RNA1310_6980.1, RNA1509_14573, RNA1509_30353} {RNA1509_14573, RNA1509_30353, RNA815_2192}
25. MligTC455_15445 1402 29.22 Mlig455_045380

Neo: -

Age: logFC(26M/2M)=-0.318

 C20orf96 0.957 - - - - - 0.957 Mlig455_045380 {REF} {Length: 1425} {Pfam: Domain of unknown function (DUF4618) [PF15397.8, score=141.8]} {Human: ENSG00000196476, C20orf96, chromosome 20 open reading frame 96, [RH, Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000032680, 6820408C15Rik, RIKEN cDNA 6820408C15 gene, [Score=47.8, Expect=9e-06]} {RNA1509_21367} {RNA1310_14669, RNA1509_21367} {RNA1509_21367, RNA815_11985.1}
26. MligTC455_20723 1908 39.76 Mlig455_026557

Neo: -

Age: -

 CCDC62 0.955 - - - 0.955 - - Mlig455_026557 {REF} {Length: 2509} {Human: ENSG00000130783, CCDC62, coiled-coil domain containing 62, [RH, Score=117, Expect=7e-27]} {Mouse: ENSMUSG00000061882, Ccdc62, coiled-coil domain containing 62, [RH, Score=122, Expect=1e-28]} {RNA1509_39993} {RNA1310_6237.1} {RNA815_13573}
27. MligTC455_49566 1839 38.31 Mlig455_056491

Neo: -

Age: Down-Down-Up

 0.955 - - - - - 0.955 Mlig455_056491 {REF} {Length: 989} {RNA1509_22287} {RNA1310_42170} {RNA815_20808}
28. MligTC455_34273 1643 34.23 Mlig455_025775

Neo: -

Age: -

 CASP3 0.954 - - - - - 0.954 Mlig455_025775 {REF} {Length: 1939} {TRANSSPLICED} {Pfam: Caspase domain [PF00656.24, score=126.7]} {Human: ENSG00000164305, CASP3, caspase 3, [RH, Score=227, Expect=5e-73]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [RH, Score=224, Expect=4e-72]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [RH, Score=198, Expect=3e-61]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [Score=134, Expect=2e-37]} {Smed: dd_Smed_v6_3121_1_1, dd_Smed_v6_3121_1_1, [RH, Score=186, Expect=5e-58]} {RNA1509_25609, RNA1509_35921, RNA1509_4081} {RNA1310_54899, RNA1509_25609, RNA1509_35921} {RNA1509_25609, RNA1509_35921, RNA815_10100}
29. MligTC455_49237 1147 23.89 Mlig455_053089

Neo: -

Age: Down-Up-Down

 CAMK4 0.953 - - - 0.953 - - Mlig455_053089 {REF} {Length: 2761} {Pfam: Protein kinase domain [PF00069.27, score=263.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=117.6]; Fungal protein kinase [PF17667.3, score=24.4]; ABC1 atypical kinase-like domain [PF03109.18, score=20.0]} {Human: ENSG00000152495, CAMK4, calcium/calmodulin dependent protein kinase IV, [Score=351, Expect=4e-118]} {Mouse: ENSMUSG00000038128, Camk4, calcium/calmodulin-dependent protein kinase IV, [Score=353, Expect=3e-119]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=248, Expect=2e-79]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=245, Expect=8e-79]} {Smed: dd_Smed_v6_10731_0_1, dd_Smed_v6_10731_0_1, [Score=357, Expect=1e-122]} {RNA1509_27017, RNA1509_8403} {RNA1310_11195.2, RNA1509_27017, RNA1509_8403} {RNA1509_27017, RNA1509_8403, RNA815_9103.1}
30. MligTC455_32221 454 9.47 Mlig455_015391

Neo: -

Age: Down-Up-Up

Region-enriched R7: 2.511/0.00229

 0.952 - - - - - 0.952 Mlig455_015391 {REF} {Length: 1571} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=38.4]} {Smed: dd_Smed_v6_31564_0_1, dd_Smed_v6_31564_0_1, [Score=67.0, Expect=3e-12]} {RNA1509_41917} {RNA1310_24082} {RNA815_13028}
31. MligTC455_21802 801 16.69 Mlig455_051016

Neo: -

Age: Up-Down-Down

 0.95 - - - 0.950 - - Mlig455_051016 {REF} {Length: 4793} {Pfam: WSC domain [PF01822.21, score=69.1]} {Mouse: ENSMUSG00000020811, Wscd1, WSC domain containing 1, [Score=53.9, Expect=1e-06]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=59.7, Expect=1e-08]} {RNA1509_25269} {RNA1310_284.1} {RNA815_96}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA