Data search
Results for MligTC455_16818
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_16818 | 226 | 4.72 | Mlig455_039841 | Neo: - Age: - |
ATG10 | Mlig455_039841 {REF} {Length: 1115} {TRANSSPLICED} {Pfam: Autophagocytosis associated protein, active-site domain [PF03987.17, score=64.0]} {Human: ENSG00000152348, ATG10, autophagy related 10, [RH, Score=61.2, Expect=4e-11]} {Mouse: ENSMUSG00000021619, Atg10, autophagy related 10, [RH, Score=60.8, Expect=3e-11]} {Dmel: FBgn0040780, Atg10, Autophagy-related 10, [RH, Score=54.3, Expect=3e-09]} {RNA1509_31647, RNA1509_59339} {RNA1310_55060, RNA1509_31647, RNA1509_59339} {RNA1509_31647, RNA1509_59339, RNA815_29570} |
Cumulative graph for MligTC455_16818
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 2.086 | 2.765 | 0.08453 | 0.63248 | |
| RegionR2 | 0.226 | 2.765 | 0.70600 | 1.00000 | |
| RegionR3 | -0.539 | 2.765 | 0.28481 | 0.82728 | |
| RegionR4 | 0.091 | 2.765 | 0.86604 | 1.00000 | |
| RegionR5 | -0.108 | 2.765 | 0.80792 | 1.00000 | |
| RegionR6 | -0.859 | 2.765 | 0.11911 | 0.62974 | |
| RegionR7 | 0.966 | 2.765 | 0.10715 | 0.62140 | |
| RegionR8 | -1.862 | 2.765 | 0.11546 | 0.62787 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.409 | 2.765 | 0.06077 | 0.72781 | |
| RegenerationR2 | -1.14 | 2.765 | 0.02154 | 0.24108 | |
| RegenerationR3 | -0.363 | 2.765 | 0.50945 | 0.86083 | |
| RegenerationR4 | -0.058 | 2.765 | 0.91094 | 1.00000 | |
| RegenerationR5 | -0.597 | 2.765 | 0.21660 | 0.65143 | |
| RegenerationR6 | 0.42 | 2.765 | 0.48139 | 0.79267 | |
| RegenerationBL | 0.757 | 2.765 | 0.32651 | 0.69310 | |
| RegenerationTP | -0.955 | 2.765 | 0.40277 | 0.83111 |
Genes with expression patterns similar to MligTC455_16818
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_16818 | 226 | 4.72 | Mlig455_039841 | Neo: - Age: - |
ATG10 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_039841 {REF} {Length: 1115} {TRANSSPLICED} {Pfam: Autophagocytosis associated protein, active-site domain [PF03987.17, score=64.0]} {Human: ENSG00000152348, ATG10, autophagy related 10, [RH, Score=61.2, Expect=4e-11]} {Mouse: ENSMUSG00000021619, Atg10, autophagy related 10, [RH, Score=60.8, Expect=3e-11]} {Dmel: FBgn0040780, Atg10, Autophagy-related 10, [RH, Score=54.3, Expect=3e-09]} {RNA1509_31647, RNA1509_59339} {RNA1310_55060, RNA1509_31647, RNA1509_59339} {RNA1509_31647, RNA1509_59339, RNA815_29570} |
| 2. | MligTC455_35789 | 246 | 5.12 | Mlig455_066230 | Neo: - Age: - |
MLXIP | 1.72 | - | - | 0.767 | 0.953 | - | - | Mlig455_066230 {REF} {Length: 5102} {TRANSSPLICED} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=32.1]} {Human: ENSG00000175727, MLXIP, MLX interacting protein, [Score=135, Expect=4e-32]; ENSG00000281178, MLXIP, MLX interacting protein, [Score=135, Expect=4e-32]} {Mouse: ENSMUSG00000038342, Mlxip, MLX interacting protein, [Score=130, Expect=4e-31]; ENSMUSG00000005373, Mlxipl, MLX interacting protein-like, [Score=126, Expect=8e-30]} {Dmel: FBgn0032940, Mondo, [Score=142, Expect=3e-34]} {Celegans: WBGene00003378, mml-1, Protein WBSCR14 homolog, [Score=108, Expect=5e-24]} {Smed: dd_Smed_v6_9226_0_1, dd_Smed_v6_9226_0_1, [Score=132, Expect=1e-31]} {RNA1509_19256} {RNA1310_10593, RNA1509_19256} {RNA1509_19256, RNA815_5563} |
| 3. | MligTC455_15192 | 354 | 7.37 | Mlig455_053640 | Neo: Germline Age: - Region-specific R4: 4.285 Region-enriched R4: 2.480/0.00000 Regeneration-downregulated R4: -1.962 Regeneration-depleted R4: -1.962 |
RAB26 | 0.97 | - | - | - | 0.970 | - | - | Mlig455_053640 {REF} {Length: 3489} {Pfam: Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=54.9]; Ras family [PF00071.24, score=40.8]; AAA domain [PF13401.8, score=20.3]} {Human: ENSG00000167964, RAB26, RAB26, member RAS oncogene family, [Score=50.8, Expect=1e-06]; ENSG00000144134, RABL2A, RAB, member of RAS oncogene family like 2A, [Score=50.1, Expect=2e-06]} {Mouse: ENSMUSG00000022621, Rabl2, RAB, member RAS oncogene family-like 2, [Score=52.8, Expect=1e-07]} {Dmel: FBgn0086913, Rab26, [Score=52.0, Expect=4e-07]} {Celegans: WBGene00004266, rab-1, RAB family, [Score=48.5, Expect=2e-06]} {Smed: dd_Smed_v6_854_0_8, dd_Smed_v6_854_0_8, [Score=48.1, Expect=1e-06]} {RNA1509_17775} {RNA1310_15879, RNA1509_17775} {RNA1509_17775, RNA815_12961} |
| 4. | MligTC455_52063 | 6019 | 125.4 | Mlig455_032054 | Neo: - Age: - |
ACADL | 0.963 | - | - | - | 0.963 | - | - | Mlig455_032054 {REF} {Length: 1332} {Pfam: Acyl-CoA dehydrogenase, C-terminal domain [PF00441.26, score=141.8]; Acyl-CoA dehydrogenase, middle domain [PF02770.21, score=96.9]; Acyl-CoA dehydrogenase, N-terminal domain [PF02771.18, score=35.3]; Acyl-CoA dehydrogenase, C-terminal domain [PF08028.13, score=34.1]} {Human: ENSG00000115361, ACADL, acyl-CoA dehydrogenase long chain, [RH, Score=453, Expect=2e-159]} {Mouse: ENSMUSG00000026003, Acadl, acyl-Coenzyme A dehydrogenase, long-chain, [RH, Score=464, Expect=5e-164]} {Dmel: FBgn0035911, CG6638, [Score=202, Expect=1e-61]} {Celegans: WBGene00015326, ivd-1, IsoValeryl-CoA Dehydrogenase; Isovaleryl-CoA dehydrogenase, [Score=185, Expect=3e-55]} {Smed: dd_Smed_v6_1458_0_1, dd_Smed_v6_1458_0_1, [RH, Score=453, Expect=3e-160]} {RNA1509_14692, RNA1509_2127, RNA1509_7488} {RNA1310_3696.1, RNA1509_14692, RNA1509_2127, RNA1509_7488} {RNA1509_14692, RNA1509_2127, RNA1509_7488, RNA815_4974.1} |
| 5. | MligTC455_53156 | 310 | 6.46 | Mlig455_071165 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.163/0.02696 |
LRRC59 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_071165 {REF} {Length: 1903} {Pfam: Leucine rich repeat [PF13855.8, score=65.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=28.7]; Leucine Rich Repeat [PF00560.35, score=26.4]} {Human: ENSG00000108829, LRRC59, leucine rich repeat containing 59, [RH, Score=188, Expect=2e-57]} {Mouse: ENSMUSG00000020869, Lrrc59, leucine rich repeat containing 59, [RH, Score=191, Expect=1e-58]} {Dmel: FBgn0036008, CG3408, [RH, Score=108, Expect=3e-27]} {Celegans: WBGene00010139, F56A8.3, [RH, Score=108, Expect=2e-26]} {Smed: dd_Smed_v6_2987_0_1, dd_Smed_v6_2987_0_1, [RH, Score=113, Expect=4e-29]} {RNA1509_33469, RNA1509_43901, RNA1509_47048, RNA1509_52254} {RNA1310_21864.2, RNA1509_33469, RNA1509_43901, RNA1509_47048, RNA1509_52254} {RNA1509_33469, RNA1509_43901, RNA1509_47048, RNA1509_52254, RNA815_26895} |
| 6. | MligTC455_54142 | 303 | 6.31 | Mlig455_007899, Mlig455_008005 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_007899 {REF} {Length: 3006} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=35.0]} {Smed: dd_Smed_v6_7309_0_3, dd_Smed_v6_7309_0_3, [Score=46.2, Expect=6e-06]} {RNA1509_25419, RNA1509_48076} {RNA1310_25377.2, RNA1509_25419} {RNA1509_25419, RNA815_35961} Mlig455_008005 {REF} {Length: 1544} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=35.0]} {Smed: dd_Smed_v6_7309_0_3, dd_Smed_v6_7309_0_3, [Score=46.2, Expect=7e-06]} {RNA1509_48076} {RNA1310_25377.2, RNA1509_48076} {RNA1509_48076, RNA815_35961} |
|
| 7. | MligTC455_08565 | 49 | 1.03 | Mlig455_032295 | Neo: - |
HPGD | 0.952 | - | - | - | 0.952 | - | - | Mlig455_032295 {REF} {Length: 1065} {Pfam: short chain dehydrogenase [PF00106.27, score=98.2]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=70.9]; NAD dependent epimerase/dehydratase family [PF01370.23, score=32.2]; KR domain [PF08659.12, score=30.5]; GDP-mannose 4,6 dehydratase [PF16363.7, score=24.3]; Polysaccharide biosynthesis protein [PF02719.17, score=18.8]} {Human: ENSG00000164120, HPGD, 15-hydroxyprostaglandin dehydrogenase, [Score=121, Expect=4e-33]} {Mouse: ENSMUSG00000031613, Hpgd, hydroxyprostaglandin dehydrogenase 15 (NAD), [Score=117, Expect=6e-32]} {Dmel: FBgn0011693, Pdh, Photoreceptor dehydrogenase, [Score=90.5, Expect=1e-21]} {Celegans: WBGene00000968, dhs-4, DeHydrogenases, Short chain, [Score=69.3, Expect=6e-14]} {Smed: dd_Smed_v6_2263_0_1, dd_Smed_v6_2263_0_1, [Score=53.9, Expect=7e-09]} {RNA1509_33517} {RNA1310_34765.1} {RNA815_8749.1} |
| 8. | MligTC455_45233 | 1587 | 33.07 | Mlig455_005544, Mlig455_036202 | Neo: Irradiation Age: - Region-enriched R5: 2.793/0.00000 |
0.951 | - | - | - | 0.951 | - | - | Mlig455_005544 {REF} {Length: 302} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41201} {RNA1310_4034.2} {RNA815_13005.1} Mlig455_036202 {REF} {Length: 305} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_41201} {RNA1310_4034.2} {RNA815_13005.1} |
Berezikov Lab - 2020-2021 © ERIBA