TomoSeq data search

Data search

Results for MligTC455_08565

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08565

49

1.03

Mlig455_032295

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.719

HPGD

Mlig455_032295 {REF} {Length: 1065} {Pfam: short chain dehydrogenase [PF00106.27, score=98.2]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=70.9]; NAD dependent epimerase/dehydratase family [PF01370.23, score=32.2]; KR domain [PF08659.12, score=30.5]; GDP-mannose 4,6 dehydratase [PF16363.7, score=24.3]; Polysaccharide biosynthesis protein [PF02719.17, score=18.8]} {Human: ENSG00000164120, HPGD, 15-hydroxyprostaglandin dehydrogenase, [Score=121, Expect=4e-33]} {Mouse: ENSMUSG00000031613, Hpgd, hydroxyprostaglandin dehydrogenase 15 (NAD), [Score=117, Expect=6e-32]} {Dmel: FBgn0011693, Pdh, Photoreceptor dehydrogenase, [Score=90.5, Expect=1e-21]} {Celegans: WBGene00000968, dhs-4, DeHydrogenases, Short chain, [Score=69.3, Expect=6e-14]} {Smed: dd_Smed_v6_2263_0_1, dd_Smed_v6_2263_0_1, [Score=53.9, Expect=7e-09]} {RNA1509_33517} {RNA1310_34765.1} {RNA815_8749.1}

Cumulative graph for MligTC455_08565

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.07	1.574	0.99973	1.00000
RegionR2	0.83	1.574	0.31465	0.70591
RegionR3	-1.26	1.574	0.99977	1.00000
RegionR4	2.69	1.574	0.11163	0.33093
RegionR5	-0.234	1.574	0.99976	1.00000
RegionR6	0.875	1.574	0.30463	0.89549
RegionR7	-1.54	1.574	0.99980	1.00000
RegionR8	-0.29	1.574	0.99981	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.871	1.574	1.00000	1.00000
RegenerationR2	-0.367	1.574	0.63988	0.93131
RegenerationR3	2.873	1.574	0.06589	0.43171
RegenerationR4	2.241	1.574	0.05287	0.36955
RegenerationR5	3.453	1.574	0.00735	0.15620
RegenerationR6	1.981	1.574	0.13334	0.44849
RegenerationBL	1.714	1.574	0.38922	0.75754
RegenerationTP	2.135	1.574	0.41803	0.84235

Genes with expression patterns similar to MligTC455_08565

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08565	49	1.03	Mlig455_032295	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.719	HPGD	4	-	-	1.000	1.000	1.000	1.000	Mlig455_032295 {REF} {Length: 1065} {Pfam: short chain dehydrogenase [PF00106.27, score=98.2]; Enoyl-(Acyl carrier protein) reductase [PF13561.8, score=70.9]; NAD dependent epimerase/dehydratase family [PF01370.23, score=32.2]; KR domain [PF08659.12, score=30.5]; GDP-mannose 4,6 dehydratase [PF16363.7, score=24.3]; Polysaccharide biosynthesis protein [PF02719.17, score=18.8]} {Human: ENSG00000164120, HPGD, 15-hydroxyprostaglandin dehydrogenase, [Score=121, Expect=4e-33]} {Mouse: ENSMUSG00000031613, Hpgd, hydroxyprostaglandin dehydrogenase 15 (NAD), [Score=117, Expect=6e-32]} {Dmel: FBgn0011693, Pdh, Photoreceptor dehydrogenase, [Score=90.5, Expect=1e-21]} {Celegans: WBGene00000968, dhs-4, DeHydrogenases, Short chain, [Score=69.3, Expect=6e-14]} {Smed: dd_Smed_v6_2263_0_1, dd_Smed_v6_2263_0_1, [Score=53.9, Expect=7e-09]} {RNA1509_33517} {RNA1310_34765.1} {RNA815_8749.1}
2.	MligTC455_34688	756	15.75	Mlig455_049905	Neo: - Age: logFC(26M/2M)=0.524 Region-enriched R3: 2.234/0.00031 Region-enriched R4: 1.743/0.02090 Region-enriched R5: 1.276/0.04216	MGAM2	1.681	-	-	-	-	0.950	0.731	Mlig455_049905 {REF} {Length: 4307} {Pfam: Glycosyl hydrolases family 31 [PF01055.28, score=486.1]; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase [PF16863.7, score=39.1]; Galactose mutarotase-like [PF13802.8, score=25.5]} {Human: ENSG00000257743, MGAM2, maltase-glucoamylase 2 (putative), [Score=632, Expect=0.0]; ENSG00000278563, MGAM2, maltase-glucoamylase 2 (putative), [Score=632, Expect=0.0]; ENSG00000257335, MGAM, maltase-glucoamylase, [Score=626, Expect=0.0]; ENSG00000282607, MGAM, maltase-glucoamylase, [Score=617, Expect=0.0]; ENSG00000090402, SI, sucrase-isomaltase, [Score=605, Expect=0.0]} {Mouse: ENSMUSG00000068587, Mgam, maltase-glucoamylase, [Score=644, Expect=0.0]; ENSMUSG00000027790, Sis, sucrase isomaltase (alpha-glucosidase), [Score=631, Expect=0.0]} {Dmel: FBgn0027588, GCS2alpha, Glucosidase 2 alpha subunit, [Score=226, Expect=1e-61]} {Celegans: WBGene00017071, aagr-1, Acid Alpha Glucosidase Relate, [RH, Score=476, Expect=5e-153]} {Smed: dd_Smed_v6_1062_0_1, dd_Smed_v6_1062_0_1, [Score=530, Expect=2e-174]} {RNA1509_22266, RNA1509_2280, RNA1509_24970, RNA1509_29248, RNA1509_32202, RNA1509_33412} {RNA1310_4558.1, RNA1509_22266, RNA1509_2280, RNA1509_24970, RNA1509_29248, RNA1509_32202, RNA1509_33412} {RNA1509_22266, RNA1509_2280, RNA1509_24970, RNA1509_29248, RNA1509_32202, RNA1509_33412, RNA815_1348}
3.	MligTC455_36415	57	1.19	Mlig455_036427, Mlig455_054598	Neo: - Age: -		0.985	-	-	0.985	-	-	-	Mlig455_036427 {REF} {Length: 744} {NoTransDecoderORF} {RNA1310_147078} Mlig455_054598 {REF} {Length: 1921} {Pfam: ISXO2-like transposase domain [PF12762.9, score=19.1]} {RNA1509_22299} {RNA1310_147078} {RNA815_26270}
4.	MligTC455_46950	1183	24.65	Mlig455_030580	Neo: Neoblast, stringent Age: Down-Up-Down	DPY30	0.971	-	-	-	0.971	-	-	Mlig455_030580 {REF} {Length: 1041} {Pfam: Dpy-30 motif [PF05186.15, score=70.9]} {Human: ENSG00000162961, DPY30, dpy-30, histone methyltransferase complex regulatory subunit, [RH, Score=91.7, Expect=2e-24]} {Mouse: ENSMUSG00000024067, Dpy30, dpy-30, histone methyltransferase complex regulatory subunit, [Score=92.0, Expect=9e-25]} {Dmel: FBgn0035491, Dpy-30L2, Dpy-30-like 2, [RH, Score=70.9, Expect=9e-17]} {Celegans: WBGene00001088, dpy-30, Dosage compensation protein dpy-30, [RH, Score=81.6, Expect=9e-21]} {Smed: dd_Smed_v6_9103_0_1, dd_Smed_v6_9103_0_1, [RH, Score=80.5, Expect=2e-20]} {RNA1509_7134} {RNA1310_35941.1} {RNA815_41374}
5.	MligTC455_40938	28	0.57	Mlig455_002890	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.592	PRKAR2A	0.967	-	-	0.967	-	-	-	Mlig455_002890 {REF} {Length: 3559} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=61.4]} {Human: ENSG00000114302, PRKAR2A, protein kinase cAMP-dependent type II regulatory subunit alpha, [Score=53.5, Expect=8e-07]; ENSG00000185532, PRKG1, protein kinase cGMP-dependent 1, [Score=51.2, Expect=4e-06]} {Mouse: ENSMUSG00000032601, Prkar2a, protein kinase, cAMP dependent regulatory, type II alpha, [Score=53.1, Expect=8e-07]; ENSMUSG00000052920, Prkg1, protein kinase, cGMP-dependent, type I, [Score=51.2, Expect=5e-06]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=154, Expect=2e-39]} {RNA1509_30289} {RNA1310_5962} {RNA815_9809}
6.	MligTC455_28865	175	3.64	Mlig455_011624	Neo: - Age: Down-Up-Down	EHMT1	0.963	-	-	-	0.963	-	-	Mlig455_011624 {REF} {Length: 4018} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=95.5]; Ankyrin repeats (many copies) [PF13637.8, score=86.5]; Ankyrin repeats (many copies) [PF13857.8, score=66.4]; Ankyrin repeat [PF00023.32, score=56.5]; Ankyrin repeat [PF13606.8, score=47.6]} {Human: ENSG00000181090, EHMT1, euchromatic histone lysine methyltransferase 1, [Score=81.3, Expect=5e-16]; ENSG00000134313, KIDINS220, kinase D interacting substrate 220, [Score=78.6, Expect=1e-14]} {Mouse: ENSMUSG00000036893, Ehmt1, euchromatic histone methyltransferase 1, [Score=81.6, Expect=1e-15]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=68.2, Expect=1e-11]} {Celegans: WBGene00001411, fem-1, Sex-determining protein fem-1, [Score=67.4, Expect=1e-11]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=70.1, Expect=2e-12]} {RNA1509_28052} {RNA1310_14237} {RNA815_22032}
7.	MligTC455_18487	36	0.75	Mlig455_004379	Neo: - Age: -		0.96	-	-	0.960	-	-	-	Mlig455_004379 {REF} {Length: 1362} {RNA1310_54189}
8.	MligTC455_22452	37	0.78	Mlig455_030836	Neo: - Age: -	KAT6A	0.96	-	-	0.960	-	-	-	Mlig455_030836 {REF} {Length: 4002} {TRANSSPLICED} {Pfam: MOZ/SAS family [PF01853.20, score=231.2]; MYST family zinc finger domain [PF17772.3, score=42.2]} {Human: ENSG00000083168, KAT6A, lysine acetyltransferase 6A, [Score=260, Expect=3e-74]; ENSG00000156650, KAT6B, lysine acetyltransferase 6B, [Score=252, Expect=5e-74]; ENSG00000281813, KAT6B, lysine acetyltransferase 6B, [Score=252, Expect=5e-74]} {Mouse: ENSMUSG00000031540, Kat6a, K(lysine) acetyltransferase 6A, [Score=260, Expect=3e-74]; ENSMUSG00000021767, Kat6b, K(lysine) acetyltransferase 6B, [Score=248, Expect=3e-70]} {Dmel: FBgn0034975, enok, enoki mushroom, [Score=254, Expect=2e-72]} {Celegans: WBGene00007029, mys-1, Histone acetyltransferase Tip60 homolog, [Score=201, Expect=6e-58]} {Smed: dd_Smed_v6_5797_0_2, dd_Smed_v6_5797_0_2, [Score=249, Expect=4e-71]} {RNA1509_37385, RNA1509_50786} {RNA1310_9811.2, RNA1509_50786} {RNA1509_50786, RNA815_4588.1}
9.	MligTC455_39341	41	0.85	Mlig455_046862	Neo: - Age: Up-Up-Down	TRPM3	0.959	-	-	-	-	-	0.959	Mlig455_046862 {REF} {Length: 7430} {Pfam: SLOG in TRPM [PF18139.3, score=98.7]; Ankyrin repeats (3 copies) [PF12796.9, score=47.4]; Ion transport protein [PF00520.33, score=43.4]; Ankyrin repeats (many copies) [PF13857.8, score=36.0]; Ankyrin repeat [PF13606.8, score=33.6]; Ankyrin repeat [PF00023.32, score=27.9]; SLOG in TRPM, prokaryote [PF18171.3, score=22.8]; Ankyrin repeats (many copies) [PF13637.8, score=22.2]; Polycystin cation channel [PF08016.14, score=19.2]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=250, Expect=3e-66]; ENSG00000144481, TRPM8, transient receptor potential cation channel subfamily M member 8, [Score=244, Expect=2e-65]; ENSG00000070985, TRPM5, transient receptor potential cation channel subfamily M member 5, [Score=240, Expect=9e-64]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=249, Expect=5e-66]; ENSMUSG00000036251, Trpm8, transient receptor potential cation channel, subfamily M, member 8, [Score=242, Expect=9e-65]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=243, Expect=4e-64]} {Celegans: WBGene00001795, gtl-1, GTL-1; Gon-Two Like (TRP subfamily), [Score=146, Expect=9e-35]} {Smed: dd_Smed_v6_17857_0_1, dd_Smed_v6_17857_0_1, [Score=465, Expect=7e-140]} {RNA1310_48255} {RNA815_46023}
10.	MligTC455_16818	226	4.72	Mlig455_039841	Neo: - Age: -	ATG10	0.952	-	-	-	0.952	-	-	Mlig455_039841 {REF} {Length: 1115} {TRANSSPLICED} {Pfam: Autophagocytosis associated protein, active-site domain [PF03987.17, score=64.0]} {Human: ENSG00000152348, ATG10, autophagy related 10, [RH, Score=61.2, Expect=4e-11]} {Mouse: ENSMUSG00000021619, Atg10, autophagy related 10, [RH, Score=60.8, Expect=3e-11]} {Dmel: FBgn0040780, Atg10, Autophagy-related 10, [RH, Score=54.3, Expect=3e-09]} {RNA1509_31647, RNA1509_59339} {RNA1310_55060, RNA1509_31647, RNA1509_59339} {RNA1509_31647, RNA1509_59339, RNA815_29570}
11.	MligTC455_24694	144	3	Mlig455_048636, Mlig455_068860	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_048636 {REF} {Length: 361} {NoTransDecoderORF} {RNA1310_135187} Mlig455_068860 {REF} {Length: 613} {NoTransDecoderORF} {RNA1310_135187}
12.	MligTC455_17890	43	0.89	Mlig455_036597, Mlig455_057755	Neo: - Age: -		0.95	-	-	0.950	-	-	-	Mlig455_036597 {REF} {Length: 1176} {RNA1310_32799.1} {RNA815_33356} Mlig455_057755 {REF} {Length: 1238} {RNA1310_32799.1} {RNA815_33356}
13.	MligTC455_27037	141	2.94	Mlig455_040567, Mlig455_062072	Neo: - Age: - Region-enriched R2: 4.338/0.00035		0.95	-	-	0.950	-	-	-	Mlig455_040567 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_6640} {RNA1310_37036} {RNA815_207.1} Mlig455_062072 {REF} {Length: 1678} {Pfam: Replication protein A OB domain [PF16900.7, score=48.4]} {RNA1509_6640} {RNA1310_589.2} {RNA815_207.1}
14.	MligTC455_40229	55	1.14	Mlig455_013426, Mlig455_020315, Mlig455_051851	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-0.817		0.95	-	-	-	-	-	0.950	Mlig455_013426 {REF} {Length: 2790} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=33.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=76.3, Expect=2e-17]} {RNA1509_56234} {RNA1310_4326.1} {RNA815_14392} Mlig455_020315 {REF} {Length: 4608} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=107.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=65.3]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=52.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.3]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=79.7, Expect=2e-14]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=79.7, Expect=2e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=8e-82]} {RNA1509_56234} {RNA1310_4313.1, RNA1509_56234} {RNA1509_56234, RNA815_14392} Mlig455_051851 {REF} {Length: 1788} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.9]; Integrase core domain [PF00665.28, score=55.2]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_28750_0_1, dd_Smed_v6_28750_0_1, [Score=62.4, Expect=9e-12]} {RNA1509_56234} {RNA1310_4313.1} {RNA815_29579}
15.	MligTC455_45372	248	5.16	Mlig455_053718	Neo: - Age: Down-Up-Down	GATAD1	0.95	-	-	-	0.950	-	-	Mlig455_053718 {REF} {Length: 1241} {TRANSSPLICED} {Human: ENSG00000157259, GATAD1, GATA zinc finger domain containing 1, [RH, Score=97.4, Expect=3e-23]} {Mouse: ENSMUSG00000007415, Gatad1, GATA zinc finger domain containing 1, [RH, Score=97.8, Expect=2e-23]} {Dmel: FBgn0025634, CG13367, [RH, Score=72.0, Expect=6e-14]} {RNA1509_36175} {RNA1310_26687, RNA1509_36175} {RNA1509_36175, RNA815_32643}

Berezikov Lab - 2020-2021 © ERIBA