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Results for MligTC455_16858

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16858 26 0.53 Mlig455_041709

Neo: -

Age: -

 Mlig455_041709 {REF} {Length: 996} {NoTransDecoderORF} {RNA1310_81082}

Cumulative graph for MligTC455_16858

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.767 0.951 0.99995 1.00000
RegionR2 0.297 0.951 0.99990 1.00000
RegionR3 0.454 0.951 1.00000 1.00000
RegionR4 -0.46 0.951 0.99991 1.00000
RegionR5 0.208 0.951 0.99996 1.00000
RegionR6 0.007 0.951 0.99997 1.00000
RegionR7 0.084 0.951 0.99997 1.00000
RegionR8 0.176 0.951 0.99996 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.24 0.951 0.99999 1.00000
RegenerationR2 3.018 0.951 0.03877 0.32510
RegenerationR3 2.293 0.951 0.23899 0.67316
RegenerationR4 2.548 0.951 0.10315 0.49619
RegenerationR5 3.232 0.951 0.03763 0.32145
RegenerationR6 4.6 0.951 0.01520 0.15201
RegenerationBL 2.851 0.951 0.20152 0.54053
RegenerationTP 2.768 0.951 0.35298 0.79437


Genes with expression patterns similar to MligTC455_16858

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16858 26 0.53 Mlig455_041709

Neo: -

Age: -

 2 - - - 1.000 1.000 - Mlig455_041709 {REF} {Length: 996} {NoTransDecoderORF} {RNA1310_81082}
2. MligTC455_10386 40 0.84 Mlig455_016460, Mlig455_016526, Mlig455_049813

Neo: -

Age: Up-Down-Down

 CHRNA2, CHRNA6 0.967 - - - 0.967 - -

Mlig455_016460 {REF} {Length: 2441} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=211, Expect=9e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=4e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=5e-56]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=214, Expect=3e-62]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=211, Expect=1e-60]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=216, Expect=6e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=210, Expect=8e-61]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=5e-148]} {RNA1310_41035} {RNA815_43177}

Mlig455_016526 {REF} {Length: 2438} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.6]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=111.5]} {Human: ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=211, Expect=8e-61]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=4e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=6e-56]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=214, Expect=4e-62]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=211, Expect=1e-60]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=216, Expect=6e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=210, Expect=8e-61]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=4e-148]} {RNA1310_41035} {RNA815_43177}

Mlig455_049813 {REF} {Length: 2457} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=156.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=109.6]} {Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=209, Expect=5e-60]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=207, Expect=1e-59]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=6e-57]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=3e-57]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=201, Expect=5e-57]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=201, Expect=6e-56]} {Mouse: ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=213, Expect=1e-61]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=212, Expect=1e-61]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=204, Expect=2e-58]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=203, Expect=6e-57]} {Dmel: FBgn0004118, nAChRbeta2, nicotinic Acetylcholine Receptor beta2, [Score=217, Expect=4e-63]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=209, Expect=1e-60]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=439, Expect=3e-148]} {RNA1310_41035} {RNA815_43177}
3. MligTC455_52180 49 1.02 Mlig455_026542

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_026542 {REF} {Length: 1858} {NoTransDecoderORF} {RNA1509_47901} {RNA1310_42492.2} {RNA815_28442}
4. MligTC455_45161 29 0.6 Mlig455_027613

Neo: Irradiation

Age: -

 WSCD2 0.957 - - - 0.957 - - Mlig455_027613 {REF} {Length: 1427} {Pfam: WSC domain [PF01822.21, score=56.9]; PAN domain [PF00024.28, score=21.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=54.3, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.6, Expect=4e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=61.2, Expect=8e-11]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.8, Expect=4e-08]} {RNA1509_29094} {RNA1310_36326} {RNA815_27950.1}
5. MligTC455_41295 203 4.23 Mlig455_007836

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.543

 0.954 - - - 0.954 - - Mlig455_007836 {REF} {Length: 2189} {RNA1509_59262} {RNA1310_31928, RNA1509_59262} {RNA1509_59262, RNA815_32415}
6. MligTC455_33440 62 1.29 Mlig455_053806, Mlig455_053807

Neo: -

Age: Up-Down-Down

Region-enriched R2: 5.142/0.02950

 GRID1 0.952 - - - 0.952 - -

Mlig455_053806 {REF} {Length: 3070} {Pfam: Ligand-gated ion channel [PF00060.28, score=72.9]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=46.7]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=39.8]; Receptor family ligand binding region [PF01094.30, score=28.6]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=145, Expect=2e-35]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=143, Expect=2e-34]} {Dmel: FBgn0038837, CG3822, [Score=126, Expect=2e-29]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=112, Expect=3e-25]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=257, Expect=1e-77]} {RNA1310_13880.2} {RNA815_12458}

Mlig455_053807 {REF} {Length: 3142} {Pfam: Ligand-gated ion channel [PF00060.28, score=79.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=46.3]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=38.3]; Receptor family ligand binding region [PF01094.30, score=36.5]} {Human: ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=139, Expect=2e-33]} {Mouse: ENSMUSG00000041078, Grid1, glutamate receptor, ionotropic, delta 1, [Score=137, Expect=1e-32]} {Dmel: FBgn0038837, CG3822, [Score=125, Expect=5e-29]} {Celegans: WBGene00001614, glr-3, GLutamate Receptor family (AMPA), [Score=117, Expect=1e-26]} {Smed: dd_Smed_v6_21015_0_1, dd_Smed_v6_21015_0_1, [Score=259, Expect=2e-78]} {RNA1310_13880.2} {RNA815_12458}
7. MligTC455_12746 35 0.72 Mlig455_046035

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_046035 {REF} {Length: 577} {NoTransDecoderORF} {RNA1509_55375} {RNA1310_61728} {RNA815_38799}

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