Data search


search
Exact
Search

Results for MligTC455_16889

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_16889 554 11.53 Mlig455_017176

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.299

Region-enriched R5: 1.228/0.00051

Mlig455_017176 {REF} {Length: 1431} {TRANSSPLICED} {Pfam: Transmembrane protein 126 [PF07114.13, score=30.6]} {Smed: dd_Smed_v6_6959_0_1, dd_Smed_v6_6959_0_1, [RH, Score=75.1, Expect=4e-16]} {RNA1509_25056} {RNA1310_22789, RNA1509_25056} {RNA1509_25056, RNA815_9908}

Cumulative graph for MligTC455_16889

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.517 3.94 0.68079 1.00000
RegionR2 -0.722 3.94 0.14314 0.47102
RegionR3 -0.332 3.94 0.37963 0.91200
RegionR4 0.952 3.94 0.02511 0.11963
RegionR5 1.228 3.94 0.00002 0.00051
RegionR6 -0.187 3.94 0.62805 1.00000
RegionR7 -0.132 3.94 0.79747 1.00000
RegionR8 -0.29 3.94 0.65545 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.179 3.94 0.92350 1.00000
RegenerationR2 -0.443 3.94 0.27707 0.72106
RegenerationR3 0.059 3.94 0.88584 1.00000
RegenerationR4 -0.842 3.94 0.03569 0.30533
RegenerationR5 -0.615 3.94 0.06268 0.39743
RegenerationR6 0.492 3.94 0.22075 0.56497
RegenerationBL 0.122 3.94 0.82385 1.00000
RegenerationTP -1.267 3.94 0.06916 0.42268


Genes with expression patterns similar to MligTC455_16889

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_16889 554 11.53 Mlig455_017176

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.299

Region-enriched R5: 1.228/0.00051

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_017176 {REF} {Length: 1431} {TRANSSPLICED} {Pfam: Transmembrane protein 126 [PF07114.13, score=30.6]} {Smed: dd_Smed_v6_6959_0_1, dd_Smed_v6_6959_0_1, [RH, Score=75.1, Expect=4e-16]} {RNA1509_25056} {RNA1310_22789, RNA1509_25056} {RNA1509_25056, RNA815_9908}
2. MligTC455_16890 536 11.16 Mlig455_048125

Neo: Int S/G2/M

Age: Down-Up-Up

Region-enriched R5: 1.048/0.00247

Regeneration-enriched BL: 1.970
Regeneration-enriched R6: 1.647

GSTCD 3.557 0.976 0.982 - 0.834 - 0.765 Mlig455_048125 {REF} {Length: 3240} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13679.8, score=31.9]; Transmembrane protein 126 [PF07114.13, score=29.5]; Methyltransferase domain [PF13847.8, score=27.6]; Methyltransferase small domain [PF05175.16, score=25.4]; rRNA small subunit methyltransferase G [PF02527.17, score=20.6]} {Human: ENSG00000138780, GSTCD, glutathione S-transferase C-terminal domain containing, [RH, Score=191, Expect=1e-51]} {Mouse: ENSMUSG00000028018, Gstcd, glutathione S-transferase, C-terminal domain containing, [RH, Score=191, Expect=3e-51]} {Dmel: FBgn0032724, CG10428, [RH, Score=179, Expect=1e-47]} {Smed: dd_Smed_v6_16407_0_1, dd_Smed_v6_16407_0_1, [RH, Score=222, Expect=1e-63]} {RNA1509_34179, RNA1509_50307} {RNA1310_13802, RNA1509_50307} {RNA1509_50307, RNA815_15748}
3. MligTC455_15823 6025 125.53 Mlig455_031852, Mlig455_031938

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.388/0.00002

Regeneration-upregulated BL: 1.361

Regeneration-enriched BL: 1.361

CCNB1 2.576 - - - 0.952 0.794 0.830

Mlig455_031852 {REF} {Length: 1803} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=114.4]; Cyclin, C-terminal domain [PF02984.21, score=79.8]} {Human: ENSG00000134057, CCNB1, cyclin B1, [Score=207, Expect=4e-62]} {Mouse: ENSMUSG00000032218, Ccnb2, cyclin B2, [Score=200, Expect=5e-60]; ENSMUSG00000041431, Ccnb1, cyclin B1, [Score=194, Expect=1e-57]} {Dmel: FBgn0000405, CycB, Cyclin B, [Score=182, Expect=2e-52]} {Celegans: WBGene00000867, cyb-2.2, CYclin B, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [Score=109, Expect=1e-26]} {RNA1509_35079} {RNA1310_13754.1} {RNA815_5712.1}

Mlig455_031938 {REF} {Length: 2070} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=114.4]; Cyclin, C-terminal domain [PF02984.21, score=79.7]} {Human: ENSG00000134057, CCNB1, cyclin B1, [Score=206, Expect=5e-62]} {Mouse: ENSMUSG00000032218, Ccnb2, cyclin B2, [Score=201, Expect=1e-60]; ENSMUSG00000041431, Ccnb1, cyclin B1, [Score=194, Expect=2e-57]} {Dmel: FBgn0000405, CycB, Cyclin B, [Score=181, Expect=5e-52]} {Celegans: WBGene00000867, cyb-2.2, CYclin B, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_7837_0_1, dd_Smed_v6_7837_0_1, [Score=110, Expect=1e-26]} {RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675} {RNA1310_13754.1, RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675} {RNA1509_23408, RNA1509_27076, RNA1509_35079, RNA1509_8675, RNA815_5712.1}
4. MligTC455_43592 956 19.92 Mlig455_015053

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.464/0.00058

CDK1 2.552 - - - 0.951 0.709 0.892 Mlig455_015053 {REF} {Length: 1680} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=253.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=124.7]; Haspin like kinase domain [PF12330.10, score=23.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=18.0]} {Human: ENSG00000170312, CDK1, cyclin dependent kinase 1, [RH, Score=412, Expect=6e-145]} {Mouse: ENSMUSG00000019942, Cdk1, cyclin-dependent kinase 1, [RH, Score=407, Expect=3e-143]} {Dmel: FBgn0004106, Cdk1, Cyclin-dependent kinase 1, [RH, Score=418, Expect=8e-148]} {Celegans: WBGene00000405, cdk-1, Cyclin-dependent kinase 1, [RH, Score=400, Expect=3e-140]} {Smed: dd_Smed_v6_31502_0_2, dd_Smed_v6_31502_0_2, [RH, Score=412, Expect=5e-145]} {RNA1509_21595, RNA1509_7104} {RNA1310_17831, RNA1509_21595, RNA1509_7104} {RNA1509_21595, RNA1509_7104, RNA815_7489.1}
5. MligTC455_47726 1983 41.3 Mlig455_021500, Mlig455_063198

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.718/0.00000

2.542 - - - 0.951 0.767 0.824

Mlig455_021500 {REF} {Length: 1309} {TRANSSPLICED} {Mouse: ENSMUSG00000040033, Stat2, signal transducer and activator of transcription 2, [RH, Score=71.2, Expect=2e-13]} {RNA1509_46464} {RNA1310_29059.1} {RNA815_22216}

Mlig455_063198 {REF} {Length: 1304} {TRANSSPLICED} {Mouse: ENSMUSG00000040033, Stat2, signal transducer and activator of transcription 2, [RH, Score=71.6, Expect=2e-13]} {RNA1509_29395, RNA1509_46464} {RNA1310_29059.1, RNA1509_29395, RNA1509_46464} {RNA1509_29395, RNA1509_46464, RNA815_22216}
6. MligTC455_47882 920 19.18 Mlig455_014428

Neo: -

Age: Down-Up-Up

Region-enriched R4: 1.468/0.00366
Region-enriched R5: 1.389/0.00012

2.45 - - - 0.954 0.735 0.761 Mlig455_014428 {REF} {Length: 914} {TRANSSPLICED} {RNA1509_12311} {RNA1310_13342} {RNA815_9722.1}
7. MligTC455_39816 1716 35.75 Mlig455_033778

Neo: -

Age: -

G3BP2 1.86 - - 0.910 0.950 - - Mlig455_033778 {REF} {Length: 2268} {TRANSSPLICED} {Pfam: Nuclear transport factor 2 (NTF2) domain [PF02136.22, score=84.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.0]; RNA recognition motif [PF16367.7, score=20.2]} {Human: ENSG00000138757, G3BP2, G3BP stress granule assembly factor 2, [RH, Score=130, Expect=1e-32]; ENSG00000145907, G3BP1, G3BP stress granule assembly factor 1, [RH, Score=124, Expect=2e-30]} {Mouse: ENSMUSG00000029405, G3bp2, GTPase activating protein (SH3 domain) binding protein 2, [RH, Score=130, Expect=1e-32]} {Dmel: FBgn0015778, rin, rasputin, [Score=130, Expect=2e-32]} {Celegans: WBGene00010677, gtbp-1, Ras-Gtpase-activating protein SH3 (Three) domain-Binding Protein, [RH, Score=65.5, Expect=3e-11]} {Smed: dd_Smed_v6_316_0_1, dd_Smed_v6_316_0_1, [Score=132, Expect=2e-34]} {RNA1509_3318, RNA1509_44632} {RNA1310_6247, RNA1509_3318, RNA1509_44632} {RNA1509_3318, RNA1509_44632, RNA815_17026}
8. MligTC455_41078 2582 53.8 Mlig455_031144, Mlig455_031152

Neo: Neoblast, stringent

Age: logFC(26M/2M)=0.405

Region-enriched R5: 1.731/0.00002

Regeneration-upregulated BL: 2.286

Regeneration-enriched BL: 2.286

CDC20, SLC8A3 1.804 - - - 0.960 0.844 -

Mlig455_031144 {REF} {Length: 2272} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=48.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=46.2]} {Human: ENSG00000117399, CDC20, cell division cycle 20, [RH, Score=353, Expect=2e-115]} {Mouse: ENSMUSG00000006398, Cdc20, cell division cycle 20, [RH, Score=363, Expect=3e-119]} {Dmel: FBgn0001086, fzy, fizzy, [RH, Score=324, Expect=5e-104]} {Celegans: WBGene00001510, fzr-1, FiZzy Related family, [Score=261, Expect=2e-78]} {Smed: dd_Smed_v6_4796_0_1, dd_Smed_v6_4796_0_1, [Score=249, Expect=8e-76]} {RNA1509_30656, RNA1509_3584, RNA1509_38107} {RNA1310_10696, RNA1509_30656, RNA1509_3584, RNA1509_38107} {RNA1509_30656, RNA1509_3584, RNA1509_38107, RNA815_5941}

Mlig455_031152 {REF} {Length: 3629} {Pfam: Calx-beta domain [PF03160.16, score=119.6]; C-terminal extension of sodium/calcium exchanger domain [PF16494.7, score=92.2]; Sodium/calcium exchanger protein [PF01699.26, score=67.9]; WD domain, G-beta repeat [PF00400.34, score=48.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=40.8]} {Human: ENSG00000100678, SLC8A3, solute carrier family 8 member A3, [Score=469, Expect=3e-150]; ENSG00000183023, SLC8A1, solute carrier family 8 member A1, [Score=446, Expect=2e-140]} {Mouse: ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=466, Expect=9e-149]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=450, Expect=1e-142]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=444, Expect=6e-144]} {Celegans: WBGene00003567, ncx-2, Na/Ca eXchangers, [Score=444, Expect=7e-141]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [Score=491, Expect=5e-159]} {RNA1509_30656} {RNA1310_10696} {RNA815_5941}
9. MligTC455_40013 1551 32.32 Mlig455_045254, Mlig455_069174

Neo: Neoblast, stringent

Age: -

Region-enriched R5: 1.916/0.00000

Regeneration-upregulated BL: 1.957

Regeneration-enriched BL: 1.957

MCM5 1.719 - - - 0.956 0.763 -

Mlig455_045254 {REF} {Length: 2658} {Pfam: MCM P-loop domain [PF00493.25, score=329.8]; MCM OB domain [PF17207.5, score=115.3]; MCM AAA-lid domain [PF17855.3, score=92.5]; MCM N-terminal domain [PF14551.8, score=58.6]; Magnesium chelatase, subunit ChlI [PF01078.23, score=25.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.5]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=937, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=892, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=800, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=834, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726}

Mlig455_069174 {REF} {Length: 3194} {Pfam: MCM P-loop domain [PF00493.25, score=329.3]; MCM OB domain [PF17207.5, score=114.9]; MCM AAA-lid domain [PF17855.3, score=92.4]; MCM N-terminal domain [PF14551.8, score=57.1]; Magnesium chelatase, subunit ChlI [PF01078.23, score=24.9]; Endonuclease-reverse transcriptase [PF14529.8, score=21.0]; AAA domain (dynein-related subfamily) [PF07728.16, score=20.1]} {Human: ENSG00000100297, MCM5, minichromosome maintenance complex component 5, [RH, Score=932, Expect=0.0]} {Mouse: ENSMUSG00000005410, Mcm5, minichromosome maintenance complex component 5, [RH, Score=929, Expect=0.0]} {Dmel: FBgn0017577, Mcm5, Minichromosome maintenance 5, [RH, Score=890, Expect=0.0]} {Celegans: WBGene00003157, mcm-5, DNA replication licensing factor mcm-5, [RH, Score=803, Expect=0.0]} {Smed: dd_Smed_v6_5764_0_1, dd_Smed_v6_5764_0_1, [RH, Score=833, Expect=0.0]} {RNA1509_4580} {RNA1310_6377} {RNA815_5726}
10. MligTC455_20515 1058 22.04 Mlig455_008959

Neo: Irradiation

Age: -

Region-enriched R5: 1.041/0.01884

RPA1 1.718 - - - 0.961 - 0.757 Mlig455_008959 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=154.5]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=63.1]; OB-fold nucleic acid binding domain [PF01336.27, score=53.2]; Cell division control protein 24, OB domain 3 [PF17244.4, score=28.5]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=496, Expect=1e-168]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=496, Expect=2e-168]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=434, Expect=9e-145]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=217, Expect=1e-61]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=416, Expect=1e-138]} {RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1310_7820.1, RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1509_35290, RNA1509_4117, RNA1509_54395, RNA815_2777}
11. MligTC455_03683 181 3.77 Mlig455_070324

Neo: Irradiation

Age: -

Region-enriched R5: 3.274/0.00002

1.707 - - - 0.953 - 0.754 Mlig455_070324 {REF} {Length: 2350} {Pfam: Transmembrane protein 100 [PF16311.7, score=20.4]} {RNA1509_38606, RNA1509_58390} {RNA1310_24714, RNA1509_58390} {RNA1509_58390, RNA815_11030.1}
12. MligTC455_20988 1051 21.9 Mlig455_035963

Neo: Irradiation

Age: -

Region-enriched R5: 2.262/0.00002

1.69 - - - 0.952 - 0.738 Mlig455_035963 {REF} {Length: 1101} {TRANSSPLICED} {Pfam: Geminin [PF07412.14, score=23.7]} {RNA1509_12313, RNA1509_12547, RNA1509_20018} {RNA1310_31319, RNA1509_12313, RNA1509_12547, RNA1509_20018} {RNA1509_12313, RNA1509_12547, RNA1509_20018, RNA815_14142}
13. MligTC455_37487 357 7.44 Mlig455_048723

Neo: Neoblast

Age: -

Region-enriched R5: 2.818/0.00001

AC116366.3 1.689 - - - 0.961 - 0.728 Mlig455_048723 {REF} {Length: 1717} {Pfam: Putative exonuclease SbcCD, C subunit [PF13558.8, score=31.1]; RecF/RecN/SMC N terminal domain [PF02463.21, score=27.9]} {Human: ENSG00000283782, AC116366.3, novel protein, [RH, Score=276, Expect=1e-82]; ENSG00000113522, RAD50, RAD50 double strand break repair protein, [RH, Score=276, Expect=5e-82]} {Mouse: ENSMUSG00000020380, Rad50, RAD50 double strand break repair protein, [Score=278, Expect=7e-83]} {Dmel: FBgn0034728, rad50, [RH, Score=231, Expect=1e-66]} {Celegans: WBGene00004296, rad-50, DNA repair protein rad-50, [RH, Score=158, Expect=7e-42]} {Smed: dd_Smed_v6_11475_0_1, dd_Smed_v6_11475_0_1, [Score=249, Expect=3e-73]} {RNA1509_46929} {RNA1310_1701} {RNA815_40610}
14. MligTC455_34361 4426 92.21 Mlig455_025291, Mlig455_025317

Neo: Neoblast, stringent

Age: Down-Up-Down

Region-enriched R5: 1.390/0.00001

PCNA 1.678 0.706 - - 0.972 - -

Mlig455_025291 {REF} {Length: 1283} {TRANSSPLICED} {Pfam: Proliferating cell nuclear antigen, N-terminal domain [PF00705.20, score=180.6]; Proliferating cell nuclear antigen, C-terminal domain [PF02747.17, score=176.9]; Rad9 [PF04139.15, score=39.8]; Repair protein Rad1/Rec1/Rad17 [PF02144.18, score=28.2]; Hus1-like protein [PF04005.14, score=19.8]} {Human: ENSG00000132646, PCNA, proliferating cell nuclear antigen, [RH, Score=359, Expect=8e-126]} {Mouse: ENSMUSG00000027342, Pcna, proliferating cell nuclear antigen, [RH, Score=360, Expect=2e-126]; ENSMUSG00000067608, Pcna-ps2, proliferating cell nuclear antigen pseudogene 2, [RH, Score=360, Expect=1e-126]} {Dmel: FBgn0005655, PCNA, Proliferating cell nuclear antigen, [RH, Score=348, Expect=1e-121]} {Celegans: WBGene00003955, pcn-1, Proliferating cell nuclear antigen, [RH, Score=259, Expect=7e-87]} {Smed: dd_Smed_v6_1920_0_1, dd_Smed_v6_1920_0_1, [RH, Score=373, Expect=9e-132]} {RNA1509_20905} {RNA1310_24951.1} {RNA815_11580.1}

Mlig455_025317 {REF} {Length: 1281} {TRANSSPLICED} {Pfam: Proliferating cell nuclear antigen, N-terminal domain [PF00705.20, score=180.6]; Proliferating cell nuclear antigen, C-terminal domain [PF02747.17, score=176.9]; Rad9 [PF04139.15, score=39.8]; Repair protein Rad1/Rec1/Rad17 [PF02144.18, score=28.2]; Hus1-like protein [PF04005.14, score=19.8]} {Human: ENSG00000132646, PCNA, proliferating cell nuclear antigen, [RH, Score=359, Expect=8e-126]} {Mouse: ENSMUSG00000027342, Pcna, proliferating cell nuclear antigen, [RH, Score=360, Expect=2e-126]; ENSMUSG00000067608, Pcna-ps2, proliferating cell nuclear antigen pseudogene 2, [RH, Score=360, Expect=1e-126]} {Dmel: FBgn0005655, PCNA, Proliferating cell nuclear antigen, [RH, Score=348, Expect=1e-121]} {Celegans: WBGene00003955, pcn-1, Proliferating cell nuclear antigen, [RH, Score=259, Expect=7e-87]} {Smed: dd_Smed_v6_1920_0_1, dd_Smed_v6_1920_0_1, [RH, Score=373, Expect=9e-132]} {RNA1509_20905} {RNA1310_24951.1} {RNA815_11580.1}
15. MligTC455_53048 1275 26.55 Mlig455_048238, Mlig455_048272

Neo: Neoblast

Age: Down-Up-Up, logFC(26M/2M)=0.250

1.661 - - - 0.711 - 0.950

Mlig455_048238 {REF} {Length: 1147} {TRANSSPLICED} {Pfam: RNase P subunit p30 [PF01876.18, score=101.5]} {RNA1509_10772} {RNA1310_26498} {RNA815_11826}

Mlig455_048272 {REF} {Length: 1147} {TRANSSPLICED} {Pfam: RNase P subunit p30 [PF01876.18, score=101.5]} {RNA1509_10772} {RNA1310_26498, RNA1509_10772} {RNA1509_10772, RNA815_11826}
16. MligTC455_19942 770 16.04 Mlig455_045672

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.530/0.00045

Regeneration-upregulated BL: 2.332

Regeneration-enriched BL: 2.332

RNPS1 0.976 - - - 0.976 - - Mlig455_045672 {REF} {Length: 1204} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=46.9]} {Human: ENSG00000205937, RNPS1, RNA binding protein with serine rich domain 1, [RH, Score=119, Expect=6e-32]} {Mouse: ENSMUSG00000034681, Rnps1, ribonucleic acid binding protein S1, [RH, Score=119, Expect=7e-32]} {Dmel: FBgn0037707, RnpS1, RNA-binding protein S1, [RH, Score=94.0, Expect=5e-22]} {Celegans: WBGene00004388, rnp-5, RNP (RRM RNA binding domain) containing, [RH, Score=88.2, Expect=2e-20]} {Smed: dd_Smed_v6_1431_0_1, dd_Smed_v6_1431_0_1, [RH, Score=103, Expect=1e-25]} {RNA1509_14792} {RNA1310_28374, RNA1509_14792} {RNA1509_14792, RNA815_13087}
17. MligTC455_15658 1665 34.68 Mlig455_040537, Mlig455_062099

Neo: -

Age: -

Region-enriched R7: 1.225/0.00642

LRRC47 0.961 - - - 0.961 - -

Mlig455_040537 {REF} {Length: 2100} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=68.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=59.9]; B3/4 domain [PF03483.19, score=27.7]; Leucine-rich repeat [PF14580.8, score=24.5]; Leucine Rich Repeat [PF00560.35, score=23.7]; Leucine Rich repeat [PF13516.8, score=21.1]} {Human: ENSG00000130764, LRRC47, leucine rich repeat containing 47, [RH, Score=278, Expect=9e-86]} {Mouse: ENSMUSG00000029028, Lrrc47, leucine rich repeat containing 47, [RH, Score=298, Expect=1e-93]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [Score=101, Expect=3e-22]} {Celegans: WBGene00021828, Y54E10A.6, [RH, Score=215, Expect=3e-63]} {Smed: dd_Smed_v6_1812_0_1, dd_Smed_v6_1812_0_1, [RH, Score=206, Expect=8e-60]} {RNA1509_14115, RNA1509_22855, RNA1509_4249} {RNA1310_12420, RNA1509_14115, RNA1509_22855, RNA1509_4249} {RNA1509_14115, RNA1509_22855, RNA1509_4249, RNA815_4366}

Mlig455_062099 {REF} {Length: 2100} {TRANSSPLICED} {Pfam: Leucine rich repeat [PF13855.8, score=68.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=59.9]; B3/4 domain [PF03483.19, score=27.7]; Leucine-rich repeat [PF14580.8, score=24.5]; Leucine Rich Repeat [PF00560.35, score=23.7]; Leucine Rich repeat [PF13516.8, score=21.1]} {Human: ENSG00000130764, LRRC47, leucine rich repeat containing 47, [RH, Score=278, Expect=9e-86]} {Mouse: ENSMUSG00000029028, Lrrc47, leucine rich repeat containing 47, [RH, Score=298, Expect=1e-93]} {Dmel: FBgn0039175, beta-PheRS, Phenylalanyl-tRNA synthetase, beta-subunit, [Score=101, Expect=3e-22]} {Celegans: WBGene00021828, Y54E10A.6, [RH, Score=215, Expect=3e-63]} {Smed: dd_Smed_v6_1812_0_1, dd_Smed_v6_1812_0_1, [RH, Score=206, Expect=8e-60]} {RNA1509_4249} {RNA1310_12420} {RNA815_4366}
18. MligTC455_22531 642 13.38 Mlig455_003820, Mlig455_019969, Mlig455_033265, Mlig455_048427, Mlig455_048495, Mlig455_048570, Mlig455_049044

Neo: -

Age: -

RAD54L 0.957 - - 0.957 - - -

Mlig455_003820 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=40.0]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=79.7, Expect=7e-20]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_019969 {REF} {Length: 1046} {Pfam: Homeodomain-like domain [PF13384.8, score=50.0]; DDE superfamily endonuclease [PF13358.8, score=39.2]; Helix-turn-helix domain [PF13518.8, score=38.4]; Winged helix-turn helix [PF13551.8, score=34.3]; Homeodomain-like domain [PF13565.8, score=30.0]; Transposase [PF01498.20, score=28.3]; Winged helix-turn-helix DNA-binding [PF13412.8, score=24.9]; Helix-turn-helix [PF01381.24, score=20.4]; Helix-turn-helix domain of resolvase [PF02796.17, score=20.0]; CENP-B N-terminal DNA-binding domain [PF04218.15, score=18.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=9e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_033265 {REF} {Length: 560} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-21]} {RNA1509_20978} {RNA1310_8640} {RNA815_3193.1}

Mlig455_048427 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_048495 {REF} {Length: 3787} {Pfam: SNF2-related domain [PF00176.25, score=206.4]; Helicase conserved C-terminal domain [PF00271.33, score=52.6]; Homeodomain-like domain [PF13384.8, score=44.4]; Helix-turn-helix domain [PF13518.8, score=38.4]; DDE superfamily endonuclease [PF13358.8, score=36.4]; Winged helix-turn helix [PF13551.8, score=31.5]; Type III restriction enzyme, res subunit [PF04851.17, score=29.5]; Rad54 N terminal [PF08658.12, score=27.1]; Homeodomain-like domain [PF13565.8, score=25.8]; Helix-turn-helix [PF01381.24, score=23.9]; Class II histone deacetylase complex subunits 2 and 3 [PF11496.10, score=22.0]; Transposase [PF01498.20, score=20.2]} {Human: ENSG00000085999, RAD54L, RAD54 like, [RH, Score=930, Expect=0.0]} {Mouse: ENSMUSG00000028702, Rad54l, RAD54 like (S. cerevisiae), [RH, Score=931, Expect=0.0]} {Dmel: FBgn0002989, okr, okra, [RH, Score=795, Expect=0.0]} {Celegans: WBGene00004298, rad-54, [RH, Score=804, Expect=0.0]} {Smed: dd_Smed_v6_15532_0_1, dd_Smed_v6_15532_0_1, [RH, Score=947, Expect=0.0]} {RNA1509_38919} {RNA1310_7218} {RNA815_1852.1}

Mlig455_048570 {REF} {Length: 872} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]; Homeodomain-like domain [PF13384.8, score=21.9]; Transposase [PF01498.20, score=21.2]; Helix-turn-helix [PF01381.24, score=20.9]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.4, Expect=5e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}

Mlig455_049044 {REF} {Length: 965} {Pfam: DDE superfamily endonuclease [PF13358.8, score=37.0]; Homeodomain-like domain [PF13384.8, score=21.1]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.8, Expect=6e-20]} {RNA1509_20978} {RNA1310_12978} {RNA815_3193.1}
19. MligTC455_49520 33496 697.82 Mlig455_069441

Neo: -

Age: -

Region-enriched R3: 1.693/0.00071

HPGDS 0.951 - - - - 0.951 - Mlig455_069441 {REF} {Length: 867} {Pfam: Glutathione S-transferase, C-terminal domain [PF14497.8, score=61.5]; Glutathione S-transferase, N-terminal domain [PF02798.22, score=46.9]; Glutathione S-transferase, C-terminal domain [PF00043.27, score=28.2]} {Human: ENSG00000163106, HPGDS, hematopoietic prostaglandin D synthase, [RH, Score=105, Expect=1e-27]} {Mouse: ENSMUSG00000029919, Hpgds, hematopoietic prostaglandin D synthase, [RH, Score=93.6, Expect=4e-23]} {Dmel: FBgn0010226, GstS1, Glutathione S transferase S1, [Score=89.7, Expect=2e-21]} {Celegans: WBGene00001753, gst-5, Probable glutathione S-transferase 5, [RH, Score=112, Expect=3e-30]} {Smed: dd_Smed_v6_20_0_1, dd_Smed_v6_20_0_1, [RH, Score=187, Expect=1e-59]} {RNA1509_1395, RNA1509_271, RNA1509_49340, RNA1509_5562} {RNA1310_36360, RNA1509_1395, RNA1509_271, RNA1509_49340, RNA1509_5562} {RNA1509_1395, RNA1509_271, RNA1509_49340, RNA1509_5562, RNA815_14903.1}
20. MligTC455_50460 232 4.84 Mlig455_050167

Neo: Int S/G2/M

Age: -

Region-enriched R4: 2.509/0.04734

0.951 - - - 0.951 - - Mlig455_050167 {REF} {Length: 2260} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=38.4]} {RNA1509_32778, RNA1509_44082, RNA1509_44517} {RNA1310_38674, RNA1509_44082, RNA1509_44517} {RNA1509_44082, RNA1509_44517, RNA815_25642}
21. MligTC455_09552 2324 48.42 Mlig455_057928

Neo: Neoblast, stringent

Age: Down-Up-Up

Regeneration-upregulated BL: 1.398

Regeneration-enriched BL: 1.398

FBL 0.95 - - - 0.950 - - Mlig455_057928 {REF} {Length: 2231} {TRANSSPLICED} {Pfam: Fibrillarin [PF01269.19, score=346.9]; tRNA methyltransferase complex GCD14 subunit [PF08704.12, score=24.9]} {Human: ENSG00000105202, FBL, fibrillarin, [RH, Score=353, Expect=7e-122]; ENSG00000280548, FBL, fibrillarin, [RH, Score=353, Expect=7e-122]; ENSG00000188573, FBLL1, fibrillarin like 1, [RH, Score=339, Expect=4e-116]} {Mouse: ENSMUSG00000051062, Fbll1, fibrillarin-like 1, [RH, Score=340, Expect=5e-117]} {Dmel: FBgn0003062, Fib, Fibrillarin, [RH, Score=359, Expect=4e-124]} {Celegans: WBGene00001423, fib-1, rRNA 2'-O-methyltransferase fibrillarin, [Score=342, Expect=3e-117]} {Smed: dd_Smed_v6_2811_0_1, dd_Smed_v6_2811_0_1, [RH, Score=316, Expect=3e-108]} {RNA1509_2653, RNA1509_2873} {RNA1310_19218, RNA1509_2653, RNA1509_2873} {RNA1509_2653, RNA1509_2873, RNA815_13797}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA