TomoSeq data search

Data search

Results for MligTC455_16930

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_16930

908

18.91

Mlig455_052907

Neo: -

Age: -

HBS1L

Mlig455_052907 {REF} {Length: 3016} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=149.1]; Elongation factor Tu C-terminal domain [PF03143.19, score=55.2]; 50S ribosome-binding GTPase [PF01926.25, score=27.1]} {Human: ENSG00000112339, HBS1L, HBS1 like translational GTPase, [RH, Score=437, Expect=7e-146]} {Mouse: ENSMUSG00000019977, Hbs1l, Hbs1-like (S. cerevisiae), [RH, Score=405, Expect=9e-133]} {Dmel: FBgn0042712, HBS1, [RH, Score=421, Expect=2e-139]} {Celegans: WBGene00010622, K07A12.4, [RH, Score=336, Expect=2e-107]} {Smed: dd_Smed_v6_9327_0_1, dd_Smed_v6_9327_0_1, [RH, Score=397, Expect=6e-131]} {RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229} {RNA1310_14619, RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229} {RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229, RNA815_5048.1}

Cumulative graph for MligTC455_16930

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.894	4.475	0.24461	0.89055
RegionR2	-0.395	4.475	0.28259	0.66908
RegionR3	-0.151	4.475	0.61138	1.00000
RegionR4	0.71	4.475	0.02999	0.13592
RegionR5	0.153	4.475	0.55772	0.91795
RegionR6	0.051	4.475	0.86345	1.00000
RegionR7	0.419	4.475	0.26028	0.88763
RegionR8	-1.681	4.475	0.00834	0.16977

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-8.161	4.475	0.01082	0.45458
RegenerationR2	0.321	4.475	0.28551	0.72847
RegenerationR3	0.08	4.475	0.80662	0.98413
RegenerationR4	-0.35	4.475	0.27196	0.71781
RegenerationR5	0.306	4.475	0.29009	0.71784
RegenerationR6	0.388	4.475	0.23610	0.58361
RegenerationBL	0.485	4.475	0.28192	0.64285
RegenerationTP	0.46	4.475	0.37295	0.81020

Genes with expression patterns similar to MligTC455_16930

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_16930	908	18.91	Mlig455_052907	Neo: - Age: -	HBS1L	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_052907 {REF} {Length: 3016} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=149.1]; Elongation factor Tu C-terminal domain [PF03143.19, score=55.2]; 50S ribosome-binding GTPase [PF01926.25, score=27.1]} {Human: ENSG00000112339, HBS1L, HBS1 like translational GTPase, [RH, Score=437, Expect=7e-146]} {Mouse: ENSMUSG00000019977, Hbs1l, Hbs1-like (S. cerevisiae), [RH, Score=405, Expect=9e-133]} {Dmel: FBgn0042712, HBS1, [RH, Score=421, Expect=2e-139]} {Celegans: WBGene00010622, K07A12.4, [RH, Score=336, Expect=2e-107]} {Smed: dd_Smed_v6_9327_0_1, dd_Smed_v6_9327_0_1, [RH, Score=397, Expect=6e-131]} {RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229} {RNA1310_14619, RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229} {RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229, RNA815_5048.1}
2.	MligTC455_36223	536	11.16	Mlig455_021430	Neo: - Age: -	RAB3IP	2.504	-	0.784	-	0.767	0.953	-	Mlig455_021430 {REF} {Length: 3736} {TRANSSPLICED} {Pfam: GDP/GTP exchange factor Sec2p [PF06428.13, score=26.8]; TolA binding protein trimerisation [PF16331.7, score=19.7]} {Human: ENSG00000127328, RAB3IP, RAB3A interacting protein, [RH, Score=135, Expect=3e-35]} {Mouse: ENSMUSG00000064181, Rab3ip, RAB3A interacting protein, [RH, Score=134, Expect=3e-35]} {Celegans: WBGene00010045, F54C9.11, [RH, Score=122, Expect=2e-31]} {RNA1509_20274, RNA1509_43824} {RNA1310_25813.1, RNA1509_20274, RNA1509_43824} {RNA1509_20274, RNA1509_43824, RNA815_8867}
3.	MligTC455_14387	463	9.64	Mlig455_022195	Neo: - Age: -		2.437	0.703	-	-	0.783	0.951	-	Mlig455_022195 {REF} {Length: 2088} {NoTransDecoderORF} {RNA1509_22930} {RNA1310_28859} {RNA815_13691}
4.	MligTC455_36596	1599	33.32	Mlig455_008350	Neo: Int S/G2/M Age: logFC(26M/2M)=0.322 Region-enriched R2: 1.280/0.03174 Regeneration-upregulated R4: 1.613 Regeneration-enriched R4: 1.613	EIF3A	1.781	-	-	-	0.953	-	0.828	Mlig455_008350 {REF} {Length: 4536} {TRANSSPLICED} {Pfam: PCI domain [PF01399.29, score=27.5]} {Human: ENSG00000107581, EIF3A, eukaryotic translation initiation factor 3 subunit A, [RH, Score=659, Expect=0.0]} {Mouse: ENSMUSG00000024991, Eif3a, eukaryotic translation initiation factor 3, subunit A, [RH, Score=661, Expect=0.0]} {Dmel: FBgn0037249, eIF3a, eukaryotic translation initiation factor 3 subunit a, [RH, Score=545, Expect=2e-174]} {Celegans: WBGene00001209, egl-45, Eukaryotic translation initiation factor 3 subunit A, [RH, Score=439, Expect=2e-135]} {Smed: dd_Smed_v6_804_0_1, dd_Smed_v6_804_0_1, [RH, Score=546, Expect=8e-178]} {RNA1509_55840, RNA1509_747} {RNA1310_2722, RNA1509_55840, RNA1509_747} {RNA1509_55840, RNA1509_747, RNA815_884}
5.	MligTC455_25189	392	8.17	Mlig455_062815	Neo: - Age: Down-Up-Down, logFC(26M/2M)=0.330	FNIP2	1.696	-	-	-	0.964	0.732	-	Mlig455_062815 {REF} {Length: 6419} {TRANSSPLICED} {Pfam: Folliculin-interacting protein middle domain [PF14637.8, score=130.1]; Folliculin-interacting protein C-terminus [PF14638.8, score=83.8]; Folliculin-interacting protein N-terminus [PF14636.8, score=47.2]} {Human: ENSG00000052795, FNIP2, folliculin interacting protein 2, [RH, Score=105, Expect=2e-22]} {Mouse: ENSMUSG00000061175, Fnip2, folliculin interacting protein 2, [RH, Score=108, Expect=1e-23]} {Dmel: FBgn0036684, CG3764, [RH, Score=87.4, Expect=4e-17]} {Smed: dd_Smed_v6_5866_0_2, dd_Smed_v6_5866_0_2, [RH, Score=80.5, Expect=3e-15]} {RNA1509_12160} {RNA1310_4135.1} {RNA815_10342}
6.	MligTC455_33329	1576	32.82	Mlig455_054311	Neo: - Age: -	GAK	1.686	-	-	0.730	-	0.956	-	Mlig455_054311 {REF} {Length: 5653} {Pfam: Protein kinase domain [PF00069.27, score=149.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=109.5]; C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=74.2]; DnaJ domain [PF00226.33, score=25.8]} {Human: ENSG00000178950, GAK, cyclin G associated kinase, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000062234, Gak, cyclin G associated kinase, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0037218, aux, auxilin, [RH, Score=445, Expect=2e-136]} {Celegans: WBGene00018516, tag-257, [RH, Score=174, Expect=2e-45]} {Smed: dd_Smed_v6_8561_0_1, dd_Smed_v6_8561_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143} {RNA1310_2152.1, RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143} {RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143, RNA815_9135}
7.	MligTC455_33330	1581	32.93	Mlig455_054323	Neo: - Age: -	GAK	1.672	-	-	0.716	-	0.956	-	Mlig455_054323 {REF} {Length: 5415} {Pfam: Protein kinase domain [PF00069.27, score=143.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=95.7]; C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=74.3]; DnaJ domain [PF00226.33, score=26.0]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.4]} {Human: ENSG00000178950, GAK, cyclin G associated kinase, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000062234, Gak, cyclin G associated kinase, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0037218, aux, auxilin, [Score=416, Expect=7e-126]} {Celegans: WBGene00018516, tag-257, [RH, Score=171, Expect=1e-44]} {Smed: dd_Smed_v6_8561_0_1, dd_Smed_v6_8561_0_1, [Score=441, Expect=1e-134]} {RNA1509_6358} {RNA1310_2152.1} {RNA815_9135}
8.	MligTC455_34929	641	13.36	Mlig455_062707	Neo: - Age: -	FBXL4	1.661	-	-	-	-	0.953	0.708	Mlig455_062707 {REF} {Length: 2502} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=38.0]; F-box-like [PF12937.9, score=28.9]; Leucine Rich repeat [PF13516.8, score=27.6]; F-box domain [PF00646.35, score=22.1]} {Human: ENSG00000112234, FBXL4, F-box and leucine rich repeat protein 4, [Score=265, Expect=1e-80]} {Mouse: ENSMUSG00000040410, Fbxl4, F-box and leucine-rich repeat protein 4, [Score=275, Expect=1e-84]} {Dmel: FBgn0030555, Fbxl4, F box and leucine-rich-repeat gene 4, [Score=211, Expect=2e-60]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=55.1, Expect=7e-08]} {Smed: dd_Smed_v6_9358_0_1, dd_Smed_v6_9358_0_1, [Score=201, Expect=7e-58]} {RNA1509_8389} {RNA1310_13931.2} {RNA815_5025}
9.	MligTC455_30792	2855	59.48	Mlig455_059626	Neo: Neoblast Age: -	EIF2S2	0.974	-	-	-	-	-	0.974	Mlig455_059626 {REF} {Length: 5235} {TRANSSPLICED} {Pfam: Domain found in IF2B/IF5 [PF01873.19, score=133.8]} {Human: ENSG00000125977, EIF2S2, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=251, Expect=1e-82]} {Mouse: ENSMUSG00000074656, Eif2s2, eukaryotic translation initiation factor 2, subunit 2 (beta), [RH, Score=254, Expect=3e-84]} {Dmel: FBgn0004926, eIF2beta, eukaryotic translation initiation factor 2 subunit beta, [RH, Score=240, Expect=5e-79]} {Celegans: WBGene00010560, eif-2beta, Eukaryotic translation initiation factor 2 subunit 2, [RH, Score=216, Expect=1e-70]} {Smed: dd_Smed_v6_3764_0_1, dd_Smed_v6_3764_0_1, [RH, Score=182, Expect=1e-57]} {RNA1509_2020, RNA1509_37964} {RNA1310_33981.1, RNA1509_2020, RNA1509_37964} {RNA1509_2020, RNA1509_37964, RNA815_5088.1}
10.	MligTC455_48491	453	9.44	Mlig455_059827	Neo: - Age: Up-Down-Down		0.962	-	-	-	0.962	-	-	Mlig455_059827 {REF} {Length: 618} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_40197} {RNA1310_48724, RNA1509_40197} {RNA1509_40197, RNA815_28476}

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