TomoSeq data search

Data search

Results for MligTC455_33329

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_33329

1576

32.82

Mlig455_054311

Neo: -

Age: -

GAK

Mlig455_054311 {REF} {Length: 5653} {Pfam: Protein kinase domain [PF00069.27, score=149.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=109.5]; C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=74.2]; DnaJ domain [PF00226.33, score=25.8]} {Human: ENSG00000178950, GAK, cyclin G associated kinase, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000062234, Gak, cyclin G associated kinase, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0037218, aux, auxilin, [RH, Score=445, Expect=2e-136]} {Celegans: WBGene00018516, tag-257, [RH, Score=174, Expect=2e-45]} {Smed: dd_Smed_v6_8561_0_1, dd_Smed_v6_8561_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143} {RNA1310_2152.1, RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143} {RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143, RNA815_9135}

Cumulative graph for MligTC455_33329

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.518	5.219	0.46171	1.00000
RegionR2	-0.094	5.219	0.76067	1.00000
RegionR3	0.073	5.219	0.76959	1.00000
RegionR4	0.428	5.219	0.13375	0.37115
RegionR5	0.587	5.219	0.00897	0.05338
RegionR6	0.563	5.219	0.02234	0.27068
RegionR7	-0.245	5.219	0.47437	1.00000
RegionR8	-0.795	5.219	0.08367	0.54821

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.645	5.219	0.54553	1.00000
RegenerationR2	0.039	5.219	0.87776	1.00000
RegenerationR3	-0.112	5.219	0.68682	0.94289
RegenerationR4	-0.239	5.219	0.39579	0.81045
RegenerationR5	-0.014	5.219	0.95663	1.00000
RegenerationR6	-0.485	5.219	0.08380	0.36193
RegenerationBL	0.217	5.219	0.52000	0.88199
RegenerationTP	0.259	5.219	0.51212	0.90924

Genes with expression patterns similar to MligTC455_33329

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_33329	1576	32.82	Mlig455_054311	Neo: - Age: -	GAK	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_054311 {REF} {Length: 5653} {Pfam: Protein kinase domain [PF00069.27, score=149.7]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=109.5]; C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=74.2]; DnaJ domain [PF00226.33, score=25.8]} {Human: ENSG00000178950, GAK, cyclin G associated kinase, [RH, Score=699, Expect=0.0]} {Mouse: ENSMUSG00000062234, Gak, cyclin G associated kinase, [RH, Score=704, Expect=0.0]} {Dmel: FBgn0037218, aux, auxilin, [RH, Score=445, Expect=2e-136]} {Celegans: WBGene00018516, tag-257, [RH, Score=174, Expect=2e-45]} {Smed: dd_Smed_v6_8561_0_1, dd_Smed_v6_8561_0_1, [RH, Score=604, Expect=0.0]} {RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143} {RNA1310_2152.1, RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143} {RNA1509_43642, RNA1509_46970, RNA1509_6358, RNA1509_8143, RNA815_9135}
2.	MligTC455_33330	1581	32.93	Mlig455_054323	Neo: - Age: -	GAK	5.859	0.912	0.997	0.997	0.999	0.995	0.959	Mlig455_054323 {REF} {Length: 5415} {Pfam: Protein kinase domain [PF00069.27, score=143.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=95.7]; C2 domain of PTEN tumour-suppressor protein [PF10409.11, score=74.3]; DnaJ domain [PF00226.33, score=26.0]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.4]} {Human: ENSG00000178950, GAK, cyclin G associated kinase, [RH, Score=660, Expect=0.0]} {Mouse: ENSMUSG00000062234, Gak, cyclin G associated kinase, [RH, Score=664, Expect=0.0]} {Dmel: FBgn0037218, aux, auxilin, [Score=416, Expect=7e-126]} {Celegans: WBGene00018516, tag-257, [RH, Score=171, Expect=1e-44]} {Smed: dd_Smed_v6_8561_0_1, dd_Smed_v6_8561_0_1, [Score=441, Expect=1e-134]} {RNA1509_6358} {RNA1310_2152.1} {RNA815_9135}
3.	MligTC455_13731	1239	25.82	Mlig455_044184	Neo: - Age: Down-Up-Up Region-enriched R5: 1.075/0.00018	PRKAB2	1.879	-	-	-	0.927	0.952	-	Mlig455_044184 {REF} {Length: 2580} {TRANSSPLICED} {Pfam: Glycogen recognition site of AMP-activated protein kinase [PF16561.7, score=117.7]; 5'-AMP-activated protein kinase beta subunit, interaction domain [PF04739.17, score=92.2]} {Human: ENSG00000131791, PRKAB2, protein kinase AMP-activated non-catalytic subunit beta 2, [RH, Score=233, Expect=1e-75]; ENSG00000111725, PRKAB1, protein kinase AMP-activated non-catalytic subunit beta 1, [RH, Score=224, Expect=3e-72]} {Mouse: ENSMUSG00000038205, Prkab2, protein kinase, AMP-activated, beta 2 non-catalytic subunit, [RH, Score=231, Expect=4e-75]; ENSMUSG00000029513, Prkab1, protein kinase, AMP-activated, beta 1 non-catalytic subunit, [RH, Score=227, Expect=2e-73]} {Dmel: FBgn0260972, alc, alicorn, [RH, Score=208, Expect=2e-65]} {Celegans: WBGene00010115, aakb-1, AMP-Activated Kinase Beta subunit, [Score=206, Expect=2e-65]} {Smed: dd_Smed_v6_4735_0_1, dd_Smed_v6_4735_0_1, [RH, Score=232, Expect=4e-75]} {RNA1509_41060} {RNA1310_7493.1, RNA1509_41060} {RNA1509_41060, RNA815_7105.2}
4.	MligTC455_22246	280	5.83	Mlig455_006222	Neo: Int S/G2/M Age: -		1.762	-	-	-	0.810	0.952	-	Mlig455_006222 {REF} {Length: 4493} {TRANSSPLICED} {RNA1509_10544, RNA1509_11263, RNA1509_47787, RNA1509_58495} {RNA1310_24272, RNA1509_10544, RNA1509_11263, RNA1509_47787, RNA1509_58495} {RNA1509_10544, RNA1509_11263, RNA1509_47787, RNA1509_58495, RNA815_8333}
5.	MligTC455_14387	463	9.64	Mlig455_022195	Neo: - Age: -		1.717	-	-	-	0.756	0.961	-	Mlig455_022195 {REF} {Length: 2088} {NoTransDecoderORF} {RNA1509_22930} {RNA1310_28859} {RNA815_13691}
6.	MligTC455_16930	908	18.91	Mlig455_052907	Neo: - Age: -	HBS1L	1.686	-	-	0.730	-	0.956	-	Mlig455_052907 {REF} {Length: 3016} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=149.1]; Elongation factor Tu C-terminal domain [PF03143.19, score=55.2]; 50S ribosome-binding GTPase [PF01926.25, score=27.1]} {Human: ENSG00000112339, HBS1L, HBS1 like translational GTPase, [RH, Score=437, Expect=7e-146]} {Mouse: ENSMUSG00000019977, Hbs1l, Hbs1-like (S. cerevisiae), [RH, Score=405, Expect=9e-133]} {Dmel: FBgn0042712, HBS1, [RH, Score=421, Expect=2e-139]} {Celegans: WBGene00010622, K07A12.4, [RH, Score=336, Expect=2e-107]} {Smed: dd_Smed_v6_9327_0_1, dd_Smed_v6_9327_0_1, [RH, Score=397, Expect=6e-131]} {RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229} {RNA1310_14619, RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229} {RNA1509_18150, RNA1509_37420, RNA1509_43397, RNA1509_53694, RNA1509_56229, RNA815_5048.1}
7.	MligTC455_31220	1458	30.37	Mlig455_051949	Neo: - Age: -	COL4A3BP	0.969	-	-	-	-	0.969	-	Mlig455_051949 {REF} {Length: 5365} {Pfam: START domain [PF01852.21, score=69.4]; PH domain [PF00169.31, score=49.0]; Pleckstrin homology domain [PF15409.8, score=37.3]; Pleckstrin homology domain [PF15413.8, score=27.3]} {Human: ENSG00000113163, COL4A3BP, collagen type IV alpha 3 binding protein, [Score=293, Expect=8e-90]} {Mouse: ENSMUSG00000021669, Col4a3bp, collagen, type IV, alpha 3 (Goodpasture antigen) binding protein, [Score=297, Expect=1e-91]} {Dmel: FBgn0027569, cert, ceramide transfer protein, [Score=278, Expect=2e-84]} {Celegans: WBGene00009120, F25H2.6, [Score=158, Expect=4e-41]} {Smed: dd_Smed_v6_5076_0_1, dd_Smed_v6_5076_0_1, [RH, Score=513, Expect=9e-173]} {RNA1509_16485, RNA1509_27284, RNA1509_6138} {RNA1310_9556, RNA1509_16485, RNA1509_27284} {RNA1509_16485, RNA1509_27284, RNA815_3063}
8.	MligTC455_06471	198	4.13	Mlig455_004281	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_004281 {REF} {Length: 706} {NoTransDecoderORF} {RNA1509_50458} {RNA1310_57261} {RNA815_34491}

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