M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_17061

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17061 25 0.52 Mlig455_059363

Neo: -

Age: -

Regeneration-enriched R4: 8.762
Regeneration-enriched R3: 8.244
Regeneration-enriched R5: 7.052
Regeneration-enriched R2: 6.670

 Mlig455_059363 {REF} {Length: 588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_24468.1} {RNA815_39459}

Cumulative graph for MligTC455_17061

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.888 0.737 0.99966 1.00000
RegionR2 5.436 0.737 0.99986 1.00000
RegionR3 0.441 0.737 0.99997 1.00000
RegionR4 -4.716 0.737 0.99970 1.00000
RegionR5 -1.598 0.737 0.99979 1.00000
RegionR6 0.358 0.737 0.99993 1.00000
RegionR7 1.486 0.737 0.99992 1.00000
RegionR8 2.48 0.737 0.99992 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 8.536 0.737 0.99990 1.00000
RegenerationR2 6.67 0.737 0.00000 0.00017
RegenerationR3 8.244 0.737 0.00001 0.00160
RegenerationR4 8.762 0.737 0.00001 0.00124
RegenerationR5 7.052 0.737 0.00000 0.00102
RegenerationR6 5.494 0.737 0.06781 0.32652
RegenerationBL 3.923 0.737 0.99993 1.00000
RegenerationTP 6.94 0.737 0.00097 0.04677


Genes with expression patterns similar to MligTC455_17061

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17061 25 0.52 Mlig455_059363

Neo: -

Age: -

Regeneration-enriched R4: 8.762
Regeneration-enriched R3: 8.244
Regeneration-enriched R5: 7.052
Regeneration-enriched R2: 6.670

 2 - - - - 1.000 1.000 Mlig455_059363 {REF} {Length: 588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_24468.1} {RNA815_39459}
2. MligTC455_11644 18 0.37 Mlig455_034785

Neo: -

Age: -

 1.933 - - - - 0.952 0.981 Mlig455_034785 {REF} {Length: 982} {NoTransDecoderORF}
3. MligTC455_17204 163 3.39 Mlig455_052035, Mlig455_057261

Neo: -

Age: logFC(26M/2M)=0.633

Region-enriched R2: 3.666/0.00172

 1.873 - - - - 0.973 0.900

Mlig455_052035 {REF} {Length: 833} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_64963} {RNA815_45593}

Mlig455_057261 {REF} {Length: 1330}
4. MligTC455_17114 529 11.02 Mlig455_014367

Neo: -

Age: Up-Down-Down

 1.835 - - - - 0.950 0.885 Mlig455_014367 {REF} {Length: 589} {NoTransDecoderORF} {RNA1509_12926} {RNA1310_21056} {RNA815_39556}
5. MligTC455_04214 13 0.27 Mlig455_022345

Neo: -

Age: -

 HCN4 1.831 - - - - 0.986 0.845 Mlig455_022345 {REF} {Length: 4342} {Pfam: Ion transport protein N-terminal [PF08412.12, score=85.6]; Ion transport protein [PF00520.33, score=81.4]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [Score=517, Expect=7e-169]; ENSG00000164588, HCN1, hyperpolarization activated cyclic nucleotide gated potassium channel 1, [Score=504, Expect=1e-167]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [Score=498, Expect=4e-165]; ENSG00000263324, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]; ENSG00000143630, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [Score=510, Expect=2e-166]; ENSMUSG00000021730, Hcn1, hyperpolarization-activated, cyclic nucleotide-gated K+ 1, [Score=506, Expect=5e-168]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [Score=500, Expect=2e-166]; ENSMUSG00000028051, Hcn3, hyperpolarization-activated, cyclic nucleotide-gated K+ 3, [Score=494, Expect=2e-165]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [Score=611, Expect=0.0]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=110, Expect=6e-25]} {Smed: dd_Smed_v6_13408_0_1, dd_Smed_v6_13408_0_1, [Score=741, Expect=0.0]} {RNA1509_8719} {RNA1310_25014} {RNA815_22259}
6. MligTC455_19836 88 1.82 Mlig455_040362

Neo: -

Age: -

 SLIT1 1.831 - - - - 0.979 0.852 Mlig455_040362 {REF} {Length: 2535} {Pfam: EGF-like domain [PF00008.29, score=29.0]; Laminin G domain [PF02210.26, score=21.9]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=50.4, Expect=5e-06]} {Mouse: ENSMUSG00000038048, Cntnap5c, contactin associated protein-like 5C, [Score=54.3, Expect=2e-07]; ENSMUSG00000070695, Cntnap5a, contactin associated protein-like 5A, [Score=52.4, Expect=8e-07]} {Celegans: WBGene00044743, crb-3, Drosophila CRumBs homolog, [Score=50.8, Expect=5e-08]} {Smed: dd_Smed_v6_8336_0_1, dd_Smed_v6_8336_0_1, [Score=47.8, Expect=8e-06]} {RNA1509_35128} {RNA1310_8604} {RNA815_4859}
7. MligTC455_33359 564 11.76 Mlig455_016899, Mlig455_021097, Mlig455_034669, Mlig455_034718, Mlig455_067585

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.438

 NYNRIN 1.83 - - - - 0.871 0.959

Mlig455_016899 {REF} {Length: 2270} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=122.5]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=115.1]; Integrase zinc binding domain [PF17921.3, score=46.9]; Integrase core domain [PF00665.28, score=22.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=9e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=85.9, Expect=1e-16]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=162, Expect=2e-41]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}

Mlig455_021097 {REF} {Length: 3431} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=119.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=78.7]; Integrase zinc binding domain [PF17921.3, score=78.1]; Integrase core domain [PF00665.28, score=50.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=20.3]; Aspartyl protease [PF13650.8, score=19.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=126, Expect=1e-28]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [RH, Score=127, Expect=6e-29]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=435, Expect=1e-134]} {RNA1509_26990} {RNA1310_6256} {RNA815_10502}

Mlig455_034669 {REF} {Length: 2281} {Pfam: Tyrosine phosphatase family [PF13350.8, score=55.4]} {RNA1509_26990} {RNA1310_23986} {RNA815_5648}

Mlig455_034718 {REF} {Length: 7582} {Pfam: Tyrosine phosphatase family [PF13350.8, score=54.5]} {RNA1509_26990} {RNA1310_14181.1} {RNA815_5648}

Mlig455_067585 {REF} {Length: 4384} {Pfam: Tyrosine phosphatase family [PF13350.8, score=54.5]} {RNA1509_26990} {RNA1310_23986} {RNA815_5648}
8. MligTC455_54275 30 0.63 Mlig455_017654

Neo: -

Age: -

 CHRM5 1.825 - - - - 0.958 0.867 Mlig455_017654 {REF} {Length: 2293} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=252.3]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=44.3]; Olfactory receptor [PF13853.8, score=21.1]} {Human: ENSG00000184984, CHRM5, cholinergic receptor muscarinic 5, [RH, Score=213, Expect=9e-61]} {Mouse: ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=226, Expect=4e-65]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [RH, Score=214, Expect=1e-59]} {Celegans: WBGene00001519, gar-3, Muscarinic acetylcholine receptor gar-3, [RH, Score=217, Expect=4e-62]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [RH, Score=221, Expect=4e-64]} {RNA1310_22334} {RNA815_30775}
9. MligTC455_27373 67 1.41 Mlig455_052992

Neo: -

Age: -

 1.819 - - - - 0.864 0.955 Mlig455_052992 {REF} {Length: 5084} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=29.1]; Mab-21 protein [PF03281.16, score=24.9]; Ankyrin repeat [PF13606.8, score=21.1]; Ankyrin repeats (many copies) [PF13857.8, score=19.7]} {Smed: dd_Smed_v6_8675_0_1, dd_Smed_v6_8675_0_1, [Score=51.2, Expect=2e-06]} {RNA1509_49840} {RNA1310_34807} {RNA815_2400.1}
10. MligTC455_40777 56 1.17 Mlig455_041571

Neo: -

Age: -

Region-enriched R5: 3.787/0.03010

 1.817 - - - - 0.962 0.855 Mlig455_041571 {REF} {Length: 726} {NoTransDecoderORF} {RNA1509_36146} {RNA1310_46869} {RNA815_14926.1}
11. MligTC455_43961 30 0.62 Mlig455_027626

Neo: -

Age: -

 1.811 - - - - 0.975 0.836 Mlig455_027626 {REF} {Length: 602} {Pfam: PAN domain [PF00024.28, score=26.5]; PAN domain [PF14295.8, score=21.8]} {RNA1310_35396.1} {RNA815_23500}
12. MligTC455_19456 34 0.7 Mlig455_038677

Neo: -

Age: -

 1.81 - - - - 0.963 0.847 Mlig455_038677 {REF} {Length: 1621} {TRANSSPLICED} {Smed: dd_Smed_v6_15258_0_1, dd_Smed_v6_15258_0_1, [Score=49.3, Expect=4e-07]} {RNA1310_112748}
13. MligTC455_52859 1033 21.52 Mlig455_049482

Neo: -

Age: logFC(26M/2M)=-0.394

 EFCAB10 1.801 - - - - 0.970 0.831 Mlig455_049482 {REF} {Length: 648} {TRANSSPLICED} {Pfam: Family of unknown function (DUF5582) [PF17819.3, score=26.3]; Family of unknown function (DUF5586) [PF17824.3, score=24.5]} {Human: ENSG00000185055, EFCAB10, EF-hand calcium binding domain 10, [RH, Score=88.6, Expect=4e-23]} {Mouse: ENSMUSG00000020562, Efcab10, EF-hand calcium binding domain 10, [RH, Score=92.8, Expect=7e-25]} {Smed: dd_Smed_v6_6477_0_1, dd_Smed_v6_6477_0_1, [RH, Score=114, Expect=2e-33]} {RNA1509_32720} {RNA1310_54125.2, RNA1509_32720} {RNA1509_32720, RNA815_27872}
14. MligTC455_16293 241 5.01 Mlig455_029235

Neo: Irradiation

Age: Up-Down-Down

 1.797 - - - - 0.977 0.820 Mlig455_029235 {REF} {Length: 1804} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=61.3]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=81.3, Expect=8e-17]} {RNA1509_14151} {RNA1310_17181} {RNA815_7262}
15. MligTC455_34499 65 1.36 Mlig455_025160, Mlig455_063937

Neo: -

Age: -

 1.788 - - - - 0.958 0.830

Mlig455_025160 {REF} {Length: 942} {RNA1310_54940} {RNA815_33690.1}

Mlig455_063937 {REF} {Length: 995} {RNA1310_54940} {RNA815_33690.1}
16. MligTC455_48558 141 2.94 Mlig455_046385

Neo: -

Age: -

 1.785 - - - - 0.973 0.812 Mlig455_046385 {REF} {Length: 1458} {RNA1310_43065} {RNA815_11099}
17. MligTC455_29514 79 1.65 Mlig455_040582

Neo: -

Age: -

 1.78 - - - - 0.828 0.952 Mlig455_040582 {REF} {Length: 5734} {RNA1509_1960, RNA1509_3858} {RNA1310_928.1, RNA1509_1960} {RNA1509_1960, RNA815_16674}
18. MligTC455_15948 25 0.51 Mlig455_007630

Neo: -

Age: -

 1.778 - - - - 0.959 0.819 Mlig455_007630 {REF} {Length: 1759} {Pfam: WSC domain [PF01822.21, score=54.5]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=52.4, Expect=2e-07]} {RNA1509_57286} {RNA1310_33352.2} {RNA815_14158.1}
19. MligTC455_45492 58 1.21 Mlig455_034276

Neo: -

Age: -

 1.774 - - - - 0.951 0.823 Mlig455_034276 {REF} {Length: 2718} {RNA1509_59550} {RNA1310_17865.1} {RNA815_34375}
20. MligTC455_48455 161 3.36 Mlig455_042005

Neo: -

Age: logFC(26M/2M)=-0.488

 CCDC154 1.772 - - - - 0.962 0.810 Mlig455_042005 {REF} {Length: 3899} {Pfam: Coiled-coil domain-containing protein 154 [PF15450.8, score=125.4]} {Human: ENSG00000197599, CCDC154, coiled-coil domain containing 154, [RH, Score=122, Expect=5e-28]} {Mouse: ENSMUSG00000059562, Ccdc154, coiled-coil domain containing 154, [RH, Score=114, Expect=1e-25]} {Dmel: FBgn0002526, LanA, Laminin A, [Score=50.4, Expect=7e-06]} {Celegans: WBGene00016032, C24A3.1, [RH, Score=65.9, Expect=7e-11]} {Smed: dd_Smed_v6_10236_0_1, dd_Smed_v6_10236_0_1, [RH, Score=450, Expect=1e-146]} {RNA1509_5383} {RNA1310_2073.1} {RNA815_2050}
21. MligTC455_16292 176 3.67 Mlig455_029213

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.543

Region-enriched R2: 3.505/0.04173

 PRKAR2B 1.745 - - - - 0.982 0.763 Mlig455_029213 {REF} {Length: 1890} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=75.9]} {Human: ENSG00000005249, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=51.6, Expect=1e-06]; ENSG00000284096, PRKAR2B, protein kinase cAMP-dependent type II regulatory subunit beta, [Score=51.6, Expect=1e-06]} {Mouse: ENSMUSG00000002997, Prkar2b, protein kinase, cAMP dependent regulatory, type II beta, [Score=51.2, Expect=1e-06]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=52.8, Expect=2e-07]} {Smed: dd_Smed_v6_14355_0_1, dd_Smed_v6_14355_0_1, [Score=104, Expect=2e-24]} {RNA1509_14151} {RNA1310_17181} {RNA815_7262}
22. MligTC455_49875 59 1.22 Mlig455_027217

Neo: -

Age: -

 1.721 - - - - 0.765 0.956 Mlig455_027217 {REF} {Length: 1809} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=88.9]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=64.7, Expect=5e-12]} {Celegans: WBGene00008997, lgc-31, Ligand-Gated ion Channel, [Score=70.9, Expect=3e-14]} {Smed: dd_Smed_v6_12146_0_1, dd_Smed_v6_12146_0_1, [Score=67.0, Expect=6e-13]} {RNA1310_26175} {RNA815_7952}
23. MligTC455_10719 61 1.26 Mlig455_041088

Neo: -

Age: -

 1.661 - - - - 0.954 0.707 Mlig455_041088 {REF} {Length: 338} {NoTransDecoderORF} {RNA1310_18998}
24. MligTC455_16356 24 0.5 Mlig455_022161

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.557

Region-enriched R4: 5.112/0.01161

 0.995 - - - - 0.995 - Mlig455_022161 {REF} {Length: 4044} {RNA1509_57484} {RNA1310_40819} {RNA815_38037}
25. MligTC455_17029 11 0.23 Mlig455_048813

Neo: -

Age: logFC(26M/2M)=-0.322

 MBNL2 0.989 - - - - 0.989 - Mlig455_048813 {REF} {Length: 3646} {Human: ENSG00000139793, MBNL2, muscleblind like splicing regulator 2, [RH, Score=135, Expect=4e-36]; ENSG00000076770, MBNL3, muscleblind like splicing regulator 3, [RH, Score=133, Expect=8e-36]; ENSG00000152601, MBNL1, muscleblind like splicing regulator 1, [RH, Score=131, Expect=1e-34]} {Mouse: ENSMUSG00000022139, Mbnl2, muscleblind like splicing factor 2, [RH, Score=135, Expect=2e-36]; ENSMUSG00000036109, Mbnl3, muscleblind like splicing factor 3, [RH, Score=135, Expect=1e-36]} {Dmel: FBgn0265487, mbl, muscleblind, [Score=150, Expect=8e-44]} {Celegans: WBGene00019347, mbl-1, Muscleblind-like protein, [RH, Score=146, Expect=4e-41]} {Smed: dd_Smed_v6_7489_0_2, dd_Smed_v6_7489_0_2, [RH, Score=164, Expect=7e-47]} {RNA1509_23214} {RNA1310_25976} {RNA815_17782}
26. MligTC455_04824 23 0.49 Mlig455_059470

Neo: -

Age: -

Region-enriched R8: 6.548/0.01820
Region-enriched R7: 5.424/0.01867

 0.986 - - - - 0.986 - Mlig455_059470 {REF} {Length: 674} {RNA1509_34011} {RNA1310_73489} {RNA815_44499}
27. MligTC455_09307 8 0.16 Mlig455_043212

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_043212 {REF} {Length: 373} {Pfam: NHL repeat [PF01436.23, score=23.2]} {RNA1509_15622} {RNA1310_37306} {RNA815_3900.8}
28. MligTC455_37303 21 0.43 Mlig455_020171

Neo: -

Age: -

 ZNF197 0.986 - - - - 0.986 - Mlig455_020171 {REF} {Length: 1573} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=60.3]; C2H2-type zinc finger [PF13894.8, score=49.1]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=26.5]; C2H2-type zinc finger [PF13912.8, score=22.1]; Transcription elongation factor Elf1 like [PF05129.15, score=19.6]} {Human: ENSG00000186448, ZNF197, zinc finger protein 197, [Score=67.0, Expect=6e-12]; ENSG00000281709, ZNF197, zinc finger protein 197, [Score=67.0, Expect=6e-12]; ENSG00000170631, ZNF16, zinc finger protein 16, [Score=67.0, Expect=5e-12]; ENSG00000131849, ZNF132, zinc finger protein 132, [Score=66.2, Expect=9e-12]; ENSG00000131845, ZNF304, zinc finger protein 304, [Score=64.3, Expect=4e-11]; ENSG00000196387, ZNF140, zinc finger protein 140, [Score=63.9, Expect=4e-11]} {Mouse: ENSMUSG00000023284, Zfp605, zinc finger protein 605, [Score=63.9, Expect=3e-11]; ENSMUSG00000079215, Zfp664, zinc finger protein 664, [Score=60.8, Expect=1e-10]} {Dmel: FBgn0020309, crol, crooked legs, [Score=61.2, Expect=2e-10]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=49.3, Expect=6e-07]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=49.3, Expect=5e-07]} {RNA1509_27079} {RNA1310_59040.1} {RNA815_26301}
29. MligTC455_38670 7 0.15 Mlig455_006879

Neo: -

Age: -

 0.986 - - - - 0.986 - Mlig455_006879 {REF} {Length: 795} {RNA1509_50839} {RNA1310_131129} {RNA815_18706.1}
30. MligTC455_05081 10 0.2 Mlig455_004977

Neo: -

Age: -

 0.985 - - - - 0.985 - Mlig455_004977 {REF} {Length: 769} {NoTransDecoderORF} {RNA1310_99788} {RNA815_6347.1}
31. MligTC455_29678 117 2.43 Mlig455_022431

Neo: -

Age: Down-Up-Down

 ANKRD50 0.984 - - - - - 0.984 Mlig455_022431 {REF} {Length: 7082} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=155.6]; Ankyrin repeats (many copies) [PF13637.8, score=151.3]; Ankyrin repeat [PF13606.8, score=83.7]; Ankyrin repeats (many copies) [PF13857.8, score=76.9]; HEAT repeats [PF13646.8, score=54.2]; Ankyrin repeat [PF00023.32, score=44.3]; Mab-21 protein [PF03281.16, score=41.3]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=89.0, Expect=5e-17]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=91.7, Expect=5e-18]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=71.6, Expect=5e-12]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=74.3, Expect=7e-13]} {Smed: dd_Smed_v6_13721_0_1, dd_Smed_v6_13721_0_1, [Score=77.0, Expect=7e-14]} {RNA1509_7687} {RNA1310_4721} {RNA815_5358.1}
32. MligTC455_02438 147 3.06 Mlig455_003956, Mlig455_027591, Mlig455_039496, Mlig455_054510

Neo: -

Age: Down-Up-Down

 PGBD4 0.982 - - - - 0.982 -

Mlig455_003956 {REF} {Length: 311} {NoTransDecoderORF} {RNA1509_37400} {RNA1310_2776}

Mlig455_027591 {REF} {Length: 409} {NoTransDecoderORF} {RNA1509_28307} {RNA1310_2776} {RNA815_4739}

Mlig455_039496 {REF} {Length: 2868} {Pfam: Transposase IS4 [PF13843.8, score=210.5]; Transposase DDE domain [PF01609.23, score=18.8]} {Human: ENSG00000182405, PGBD4, piggyBac transposable element derived 4, [Score=173, Expect=1e-46]} {Smed: dd_Smed_v6_48522_0_1, dd_Smed_v6_48522_0_1, [Score=108, Expect=1e-26]} {RNA1509_28307, RNA1509_37400} {RNA1310_2776, RNA1509_28307, RNA1509_37400} {RNA1509_28307, RNA1509_37400, RNA815_26100}

Mlig455_054510 {REF} {Length: 581} {NoTransDecoderORF} {RNA1509_28307} {RNA1310_2776} {RNA815_4739}
33. MligTC455_44011 149 3.11 Mlig455_018977

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.381

Region-enriched R4: 3.309/0.04341

 0.982 - - - - 0.982 - Mlig455_018977 {REF} {Length: 1398} {RNA1509_51989} {RNA1310_26186.1, RNA1509_51989} {RNA1509_51989, RNA815_21629}
34. MligTC455_06768 12 0.25 Mlig455_009616

Neo: -

Age: -

 0.981 - - - - 0.981 - Mlig455_009616 {REF} {Length: 322} {NoTransDecoderORF}
35. MligTC455_47838 4 0.07 Mlig455_045335

Neo: -

Age: -

 SLC8A1 0.981 - - - - 0.981 - Mlig455_045335 {REF} {Length: 3293} {Pfam: Sodium/calcium exchanger protein [PF01699.26, score=162.5]; Calx-beta domain [PF03160.16, score=108.0]} {Human: ENSG00000183023, SLC8A1, solute carrier family 8 member A1, [Score=426, Expect=1e-134]; ENSG00000100678, SLC8A3, solute carrier family 8 member A3, [Score=422, Expect=2e-133]} {Mouse: ENSMUSG00000079055, Slc8a3, solute carrier family 8 (sodium/calcium exchanger), member 3, [Score=424, Expect=5e-134]; ENSMUSG00000030376, Slc8a2, solute carrier family 8 (sodium/calcium exchanger), member 2, [Score=416, Expect=3e-131]; ENSMUSG00000054640, Slc8a1, solute carrier family 8 (sodium/calcium exchanger), member 1, [Score=409, Expect=3e-128]} {Dmel: FBgn0013995, Calx, Na/Ca-exchange protein, [Score=384, Expect=7e-119]} {Celegans: WBGene00003566, ncx-1, Na/Ca eXchangers; Sodium-calcium exchanger, [Score=395, Expect=1e-123]} {Smed: dd_Smed_v6_3303_0_1, dd_Smed_v6_3303_0_1, [Score=385, Expect=6e-120]} {RNA1509_15759, RNA1509_50628} {RNA1310_3942.1, RNA1509_15759, RNA1509_50628} {RNA1509_15759, RNA1509_50628, RNA815_1046.1}
36. MligTC455_10617 423 8.82 Mlig455_023363, Mlig455_068941

Neo: Irradiation

Age: -

Region-specific R4: 6.593

Region-enriched R4: 3.320/0.01596

 0.98 - - - - 0.980 -

Mlig455_023363 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}

Mlig455_068941 {REF} {Length: 1045} {NoTransDecoderORF} {RNA1509_20691} {RNA1310_36665} {RNA815_17209}
37. MligTC455_10704 11 0.24 Mlig455_011667

Neo: -

Age: Up-Down-Down

 0.979 - - - - 0.979 - Mlig455_011667 {REF} {Length: 1499} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=28.2]; Aspartyl protease [PF13650.8, score=20.0]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}
38. MligTC455_43078 241 5.03 Mlig455_050254

Neo: Irradiation

Age: -

 0.979 - - - - 0.979 - Mlig455_050254 {REF} {Length: 1683} {RNA1509_54086} {RNA1310_5535, RNA1509_54086} {RNA1509_54086, RNA815_6435}
39. MligTC455_50299 28 0.59 Mlig455_031446

Neo: -

Age: -

 0.978 - - - - - 0.978 Mlig455_031446 {REF} {Length: 533} {NoTransDecoderORF} {RNA1310_125936} {RNA815_14011}
40. MligTC455_15449 384 7.99 Mlig455_043360

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_043360 {REF} {Length: 1602} {NoTransDecoderORF} {RNA1509_38319} {RNA1310_35989.1} {RNA815_36673}
41. MligTC455_14860 14 0.3 Mlig455_033599

Neo: -

Age: -

 0.976 - - - - 0.976 - Mlig455_033599 {REF} {Length: 1075} {NoTransDecoderORF} {RNA1509_32111} {RNA1310_130308} {RNA815_53107.2}
42. MligTC455_03734 28 0.58 Mlig455_006090

Neo: -

Age: -

 0.975 - - - - 0.975 - Mlig455_006090 {REF} {Length: 1406} {Pfam: Methyltransferase domain [PF13383.8, score=64.8]; Methyltransferase FkbM domain [PF05050.14, score=39.6]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=172, Expect=8e-51]} {RNA1310_105941}
43. MligTC455_07720 6 0.12 Mlig455_061015

Neo: -

Age: -

 ZIC5 0.974 - - - - 0.974 - Mlig455_061015 {REF} {Length: 576} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=39.1]; Zinc-finger double domain [PF13465.8, score=33.8]; C2H2-type zinc finger [PF13894.8, score=24.2]} {Human: ENSG00000139800, ZIC5, Zic family member 5, [Score=97.1, Expect=7e-25]; ENSG00000174963, ZIC4, Zic family member 4, [Score=95.5, Expect=1e-24]; ENSG00000156925, ZIC3, Zic family member 3, [Score=95.1, Expect=3e-24]; ENSG00000043355, ZIC2, Zic family member 2, [Score=94.7, Expect=5e-24]; ENSG00000152977, ZIC1, Zic family member 1, [Score=93.6, Expect=8e-24]} {Mouse: ENSMUSG00000041703, Zic5, zinc finger protein of the cerebellum 5, [Score=97.1, Expect=5e-25]; ENSMUSG00000036972, Zic4, zinc finger protein of the cerebellum 4, [Score=95.5, Expect=5e-25]; ENSMUSG00000067860, Zic3, zinc finger protein of the cerebellum 3, [Score=95.1, Expect=1e-25]; ENSMUSG00000061524, Zic2, zinc finger protein of the cerebellum 2, [Score=94.7, Expect=3e-24]; ENSMUSG00000032368, Zic1, zinc finger protein of the cerebellum 1, [Score=93.6, Expect=5e-24]} {Dmel: FBgn0003002, opa, odd paired, [Score=96.7, Expect=5e-25]} {Celegans: WBGene00004335, ref-2, REgulator of Fusion, [Score=93.2, Expect=1e-24]} {Smed: dd_Smed_v6_22585_0_1, dd_Smed_v6_22585_0_1, [Score=100, Expect=8e-27]} {RNA1310_23362} {RNA815_19034}
44. MligTC455_07748 7 0.14 Mlig455_008972

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_008972 {REF} {Length: 898} {RNA1310_52744} {RNA815_35003}
45. MligTC455_09873 12 0.25 Mlig455_020811

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_020811 {REF} {Length: 742} {NoTransDecoderORF}
46. MligTC455_19791 6 0.13 Mlig455_011291

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_011291 {REF} {Length: 1008} {NoTransDecoderORF} {RNA1509_14401} {RNA1310_29512} {RNA815_34442}
47. MligTC455_57697 4 0.08 Mlig455_008943

Neo: -

Age: -

 0.974 - - - - 0.974 - Mlig455_008943 {REF} {Length: 529} {NoTransDecoderORF} {RNA1509_54240} {RNA1310_47176} {RNA815_26049}
48. MligTC455_16559 61 1.26 Mlig455_050729

Neo: -

Age: -

Region-enriched R3: 4.650/0.00893

 C9orf116 0.973 - - - - 0.973 - Mlig455_050729 {REF} {Length: 952} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4490) [PF14892.8, score=113.1]} {Human: ENSG00000160345, C9orf116, chromosome 9 open reading frame 116, [RH, Score=81.3, Expect=2e-20]} {Mouse: ENSMUSG00000026831, 1700007K13Rik, RIKEN cDNA 1700007K13 gene, [RH, Score=82.4, Expect=8e-21]} {Dmel: FBgn0083943, CG34107, [RH, Score=64.7, Expect=2e-14]} {Smed: dd_Smed_v6_49903_0_1, dd_Smed_v6_49903_0_1, [RH, Score=73.2, Expect=4e-17]} {RNA1509_36646} {RNA1310_50869, RNA1509_36646} {RNA1509_36646, RNA815_31506}
49. MligTC455_20370 41 0.85 Mlig455_046379

Neo: -

Age: Down-Up-Down

 0.973 - - - - 0.973 - Mlig455_046379 {REF} {Length: 1870} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.6]; Retroviral aspartyl protease [PF00077.22, score=19.6]; Family of unknown function (DUF5537) [PF17690.3, score=19.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=76.3, Expect=3e-14]} {RNA1509_51609} {RNA1310_24791} {RNA815_28268}
50. MligTC455_34799 7 0.14 Mlig455_027822, Mlig455_060021

Neo: Irradiation

Age: Up-Down-Down

 PHIP 0.973 - - - - 0.973 -

Mlig455_027822 {REF} {Length: 7647} {Pfam: Bromodomain [PF00439.27, score=125.6]; WD domain, G-beta repeat [PF00400.34, score=74.1]; Auxin response factor [PF06507.15, score=38.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.6]} {Human: ENSG00000146247, PHIP, pleckstrin homology domain interacting protein, [RH, Score=507, Expect=2e-147]; ENSG00000165288, BRWD3, bromodomain and WD repeat domain containing 3, [RH, Score=496, Expect=8e-144]} {Mouse: ENSMUSG00000032253, Phip, pleckstrin homology domain interacting protein, [RH, Score=508, Expect=7e-148]; ENSMUSG00000063663, Brwd3, bromodomain and WD repeat domain containing 3, [RH, Score=491, Expect=2e-142]} {Dmel: FBgn0011785, BRWD3, [RH, Score=453, Expect=8e-129]} {Celegans: WBGene00013143, Y53C12B.1, [Score=81.6, Expect=5e-15]} {Smed: dd_Smed_v6_6428_0_1, dd_Smed_v6_6428_0_1, [Score=73.2, Expect=8e-13]} {RNA1509_8294} {RNA1310_405.1} {RNA815_1623}

Mlig455_060021 {REF} {Length: 7346} {Pfam: Bromodomain [PF00439.27, score=124.6]; WD domain, G-beta repeat [PF00400.34, score=74.4]; Auxin response factor [PF06507.15, score=38.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=19.9]} {Human: ENSG00000146247, PHIP, pleckstrin homology domain interacting protein, [Score=438, Expect=9e-125]; ENSG00000165288, BRWD3, bromodomain and WD repeat domain containing 3, [Score=427, Expect=2e-121]} {Mouse: ENSMUSG00000032253, Phip, pleckstrin homology domain interacting protein, [Score=439, Expect=4e-125]; ENSMUSG00000063663, Brwd3, bromodomain and WD repeat domain containing 3, [Score=423, Expect=4e-120]} {Dmel: FBgn0011785, BRWD3, [Score=383, Expect=7e-107]} {Celegans: WBGene00013143, Y53C12B.1, [Score=81.6, Expect=4e-15]} {Smed: dd_Smed_v6_5428_0_2, dd_Smed_v6_5428_0_2, [Score=72.8, Expect=2e-12]} {RNA1509_8294} {RNA1310_405.1} {RNA815_1623}
51. MligTC455_37241 13 0.26 Mlig455_051006

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_051006 {REF} {Length: 447} {RNA1310_129992} {RNA815_38794.1}
52. MligTC455_49500 20 0.42 Mlig455_015875

Neo: -

Age: -

 0.973 - - - - 0.973 - Mlig455_015875 {REF} {Length: 4033} {RNA1509_40957} {RNA1310_5450.1} {RNA815_16253.1}
53. MligTC455_17255 12 0.24 Mlig455_013836

Neo: -

Age: Up-Down-Up

 0.972 - - - - 0.972 - Mlig455_013836 {REF} {Length: 3587} {TRANSSPLICED} {RNA1509_17462, RNA1509_24953} {RNA1310_485.1, RNA1509_24953} {RNA1509_24953, RNA815_2772.1}
54. MligTC455_25077 91 1.89 Mlig455_041895, Mlig455_041977

Neo: -

Age: Up-Down-Up

 0.972 - - - - 0.972 -

Mlig455_041895 {REF} {Length: 3255} {tRNA: Val(CAC),pseudo, score=24.7} {RNA1509_40878} {RNA1310_11170.1, RNA1509_40878} {RNA1509_40878, RNA815_18058.2}

Mlig455_041977 {REF} {Length: 2618} {tRNA: Val(CAC),pseudo, score=25.5} {RNA1509_40878} {RNA1310_11170.1} {RNA815_18058.2}
55. MligTC455_29878 24 0.49 Mlig455_032877

Neo: -

Age: -

 PKDREJ 0.972 - - - - 0.972 - Mlig455_032877 {REF} {Length: 2692} {Pfam: REJ domain [PF02010.17, score=190.5]; Polycystin cation channel [PF08016.14, score=164.6]; Ion transport protein [PF00520.33, score=37.9]; PLAT/LH2 domain [PF01477.25, score=29.6]; PKD domain [PF00801.22, score=29.0]} {Human: ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=171, Expect=1e-41]} {Mouse: ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=146, Expect=2e-34]; ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=140, Expect=2e-32]} {Dmel: FBgn0040333, brv3, brivido-3, [Score=68.2, Expect=7e-11]} {Celegans: WBGene00003058, lov-1, Location of vulva defective 1, [Score=89.7, Expect=2e-17]} {Smed: dd_Smed_v6_10962_0_1, dd_Smed_v6_10962_0_1, [Score=249, Expect=7e-66]} {RNA1310_24455} {RNA815_11208}
56. MligTC455_22851 17 0.35 Mlig455_032044, Mlig455_033467

Neo: Germline

Age: -

 0.971 - - - - 0.971 -

Mlig455_032044 {REF} {Length: 2628} {RNA1509_14849} {RNA1310_2829} {RNA815_37599}

Mlig455_033467 {REF} {Length: 709} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=85.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=61.2]; Integrase zinc binding domain [PF17921.3, score=46.3]; Integrase core domain [PF00665.28, score=31.5]; Zinc knuckle [PF00098.25, score=18.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=230, Expect=7e-62]} {RNA1509_14849} {RNA1310_1535} {RNA815_664}
57. MligTC455_06090 223 4.65 Mlig455_037743

Neo: -

Age: Down-Up-Up

 0.97 - - - - 0.970 - Mlig455_037743 {REF} {Length: 1087} {RNA1509_10108} {RNA1310_12853.1} {RNA815_29647}
58. MligTC455_07364 30 0.62 Mlig455_048587, Mlig455_048667

Neo: Germline

Age: logFC(26M/2M)=0.756

 FAT1 0.97 - - - - 0.970 -

Mlig455_048587 {REF} {Length: 2253} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=51.2, Expect=7e-06]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=50.1, Expect=9e-06]} {Smed: dd_Smed_v6_66040_0_1, dd_Smed_v6_66040_0_1, [Score=123, Expect=3e-31]} {RNA1310_22000.1} {RNA815_18099}

Mlig455_048667 {REF} {Length: 1815} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=51.2, Expect=4e-06]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=50.1, Expect=6e-06]} {Smed: dd_Smed_v6_66040_0_1, dd_Smed_v6_66040_0_1, [Score=124, Expect=5e-32]} {RNA1310_22000.1} {RNA815_44720}
59. MligTC455_38235 38 0.8 Mlig455_021198

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_021198 {REF} {Length: 736} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_45790.1} {RNA815_14978}
60. MligTC455_52276 32 0.67 Mlig455_048266

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_048266 {REF} {Length: 3254} {RNA1509_14162} {RNA1310_1031} {RNA815_8471}
61. MligTC455_00778 5 0.11 Mlig455_027260

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_027260 {REF} {Length: 293} {NoTransDecoderORF} {RNA1310_20699} {RNA815_39334}
62. MligTC455_02346 4 0.08 Mlig455_037954

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_037954 {REF} {Length: 1324} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=35.5]} {Smed: dd_Smed_v6_11247_0_1, dd_Smed_v6_11247_0_1, [Score=50.8, Expect=6e-07]} {RNA1509_35288} {RNA1310_20633} {RNA815_8208}
63. MligTC455_07982 16 0.34 Mlig455_028741

Neo: -

Age: -

 0.968 - - - - 0.968 - Mlig455_028741 {REF} {Length: 1430} {Dmel: FBgn0085446, CG34417, [Score=57.0, Expect=2e-08]} {Celegans: WBGene00009362, F33E2.6, [Score=57.0, Expect=1e-08]} {RNA1509_44411} {RNA1310_56745} {RNA815_14439.1}
64. MligTC455_15258 5 0.11 Mlig455_032578

Neo: -

Age: -

 AVPR1A 0.968 - - - - 0.968 - Mlig455_032578 {REF} {Length: 2627} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=109.3]; G protein-coupled glucose receptor regulating Gpa2 [PF11710.10, score=20.7]} {Human: ENSG00000166148, AVPR1A, arginine vasopressin receptor 1A, [Score=93.6, Expect=3e-20]} {Mouse: ENSMUSG00000020123, Avpr1a, arginine vasopressin receptor 1A, [Score=89.0, Expect=9e-19]; ENSMUSG00000026432, Avpr1b, arginine vasopressin receptor 1B, [Score=86.7, Expect=4e-18]} {Dmel: FBgn0036278, CrzR, Corazonin receptor, [Score=157, Expect=3e-42]} {Celegans: WBGene00018798, gnrr-1, GoNadotropin-Releasing hormone Receptor (GnRHR) related, [Score=94.4, Expect=7e-21]} {Smed: dd_Smed_v6_75337_0_1, dd_Smed_v6_75337_0_1, [Score=110, Expect=2e-27]} {RNA1310_92117}
65. MligTC455_33451 55 1.15 Mlig455_061693

Neo: Germline

Age: Down-Down-Up

 0.968 - - - - 0.968 - Mlig455_061693 {REF} {Length: 1301} {Pfam: Family of unknown function (DUF6453) [PF20051.1, score=19.4]} {RNA1509_47001} {RNA1310_55207.1} {RNA815_29866}
66. MligTC455_10351 12 0.25 Mlig455_058454

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_058454 {REF} {Length: 1338} {RNA1310_148920}
67. MligTC455_21777 298 6.21 Mlig455_028207, Mlig455_063571

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.714

 0.966 - - - - 0.966 -

Mlig455_028207 {REF} {Length: 1710} {RNA1509_42567, RNA1509_7932} {RNA1310_29963, RNA1509_42567, RNA1509_7932} {RNA1509_42567, RNA1509_7932, RNA815_28272}

Mlig455_063571 {REF} {Length: 1693} {RNA1509_42567} {RNA1310_29963} {RNA815_28272}
68. MligTC455_30505 183 3.81 Mlig455_046017

Neo: -

Age: -

 CHRNA3 0.966 - - - - 0.966 - Mlig455_046017 {REF} {Length: 2653} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=200.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=164.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=338, Expect=9e-110]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=329, Expect=2e-106]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=345, Expect=6e-113]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=334, Expect=1e-108]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=395, Expect=3e-132]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=335, Expect=3e-109]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=475, Expect=5e-164]} {RNA1509_13864, RNA1509_48088} {RNA1310_13542, RNA1509_48088} {RNA1509_48088, RNA815_5136}
69. MligTC455_31388 302 6.3 Mlig455_042897

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.156

Region-enriched R4: 2.173/0.03395

 DZIP3 0.966 - - - - - 0.966 Mlig455_042897 {REF} {Length: 4534} {Pfam: DZIP3/ hRUL138-like HEPN [PF18738.3, score=66.1]; NACHT domain [PF05729.14, score=54.1]; Caspase recruitment domain [PF00619.23, score=35.9]} {Human: ENSG00000198919, DZIP3, DAZ interacting zinc finger protein 3, [RH, Score=60.1, Expect=2e-08]} {Mouse: ENSMUSG00000116073, LT629150.1, NLR family, pyrin domain containing 1B, [RH, Score=52.4, Expect=5e-06]} {Smed: dd_Smed_v6_11157_0_1, dd_Smed_v6_11157_0_1, [RH, Score=788, Expect=0.0]} {RNA1509_1974} {RNA1310_1220} {RNA815_423}
70. MligTC455_41660 162 3.38 Mlig455_054021

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_054021 {REF} {Length: 441} {NoTransDecoderORF} {RNA1509_37967} {RNA1310_6299.1} {RNA815_1994.1}
71. MligTC455_43115 12 0.25 Mlig455_011719

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_011719 {REF} {Length: 1831} {RNA1310_81493} {RNA815_42582}
72. MligTC455_01508 2 0.05 Mlig455_070536

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_070536 {REF} {Length: 379} {NoTransDecoderORF} {RNA1310_29214}
73. MligTC455_08295 6 0.12 Mlig455_053314

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_053314 {REF} {Length: 408} {NoTransDecoderORF} {RNA1509_57939} {RNA1310_84831}
74. MligTC455_38809 89 1.85 Mlig455_010159, Mlig455_018689, Mlig455_018690, Mlig455_040237, Mlig455_051161, Mlig455_055776, Mlig455_058202, Mlig455_068783

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.196

 0.965 - - - - 0.965 -

Mlig455_010159 {REF} {Length: 4808} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.5]; Integrase core domain [PF00665.28, score=45.9]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_018689 {REF} {Length: 383} {Pfam: Zinc knuckle [PF00098.25, score=35.4]} {RNA1509_37828} {RNA1310_12941} {RNA815_12994}

Mlig455_018690 {REF} {Length: 824} {Pfam: Integrase zinc binding domain [PF17921.3, score=66.8]; Integrase core domain [PF00665.28, score=28.1]; H2C2 zinc finger [PF09337.12, score=19.0]} {RNA1509_37828} {RNA1310_20398} {RNA815_3168.1}

Mlig455_040237 {REF} {Length: 407} {Pfam: Integrase core domain [PF00665.28, score=27.8]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_051161 {REF} {Length: 2606} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=81.6]; Integrase zinc binding domain [PF17921.3, score=64.8]; Integrase core domain [PF00665.28, score=48.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=5e-27]} {RNA1509_37828} {RNA1310_2289} {RNA815_3168.1}

Mlig455_055776 {REF} {Length: 4218} {Pfam: Integrase zinc binding domain [PF17921.3, score=59.5]; Integrase core domain [PF00665.28, score=49.2]} {RNA1509_12358} {RNA1310_2289, RNA1509_12358} {RNA1509_12358, RNA815_3168.1}

Mlig455_058202 {REF} {Length: 1723} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.0]; Aspartyl protease [PF13650.8, score=31.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=28.1]; Zinc knuckle [PF00098.25, score=27.2]; Aspartyl protease [PF09668.12, score=20.1]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=101, Expect=3e-22]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}

Mlig455_068783 {REF} {Length: 3243} {Pfam: Aspartyl protease [PF13650.8, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.5]; Aspartyl protease [PF09668.12, score=23.3]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}
75. MligTC455_49302 35 0.73 Mlig455_058893

Neo: -

Age: -

Region-enriched R2: 7.010/0.02859

 SALL3 0.965 - - - - 0.965 - Mlig455_058893 {REF} {Length: 4285} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.7]; C2H2-type zinc finger [PF13894.8, score=63.9]; Zinc-finger double domain [PF13465.8, score=55.3]; Zinc-finger of C2H2 type [PF12874.9, score=45.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=39.0]} {Human: ENSG00000263310, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000256463, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000277015, SALL3, spalt like transcription factor 3, [Score=92.4, Expect=3e-18]; ENSG00000101115, SALL4, spalt like transcription factor 4, [Score=91.7, Expect=5e-18]; ENSG00000103449, SALL1, spalt like transcription factor 1, [Score=90.1, Expect=1e-17]} {Mouse: ENSMUSG00000024565, Sall3, spalt like transcription factor 3, [Score=92.4, Expect=2e-18]; ENSMUSG00000027547, Sall4, spalt like transcription factor 4, [Score=92.0, Expect=2e-18]; ENSMUSG00000031665, Sall1, spalt like transcription factor 1, [Score=90.1, Expect=1e-17]} {Dmel: FBgn0261648, salm, spalt major, [RH, Score=97.4, Expect=4e-20]} {Celegans: WBGene00004773, sem-4, SEM-4 long form, [RH, Score=97.1, Expect=3e-20]} {Smed: dd_Smed_v6_14176_0_1, dd_Smed_v6_14176_0_1, [RH, Score=121, Expect=2e-28]} {RNA1310_43057} {RNA815_29425}
76. MligTC455_57483 3 0.06 Mlig455_023720

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_023720 {REF} {Length: 202} {NoTransDecoderORF} {RNA1310_54045}
77. MligTC455_10776 11 0.22 Mlig455_032885

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_032885 {REF} {Length: 215} {NoTransDecoderORF} {RNA1310_126376} {RNA815_59053.1}
78. MligTC455_41295 203 4.23 Mlig455_007836

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.543

 0.964 - - - - - 0.964 Mlig455_007836 {REF} {Length: 2189} {RNA1509_59262} {RNA1310_31928, RNA1509_59262} {RNA1509_59262, RNA815_32415}
79. MligTC455_47538 50 1.03 Mlig455_025826

Neo: -

Age: -

Region-enriched R2: 5.073/0.01138
Region-enriched R3: 3.811/0.02847

 CALM2 0.964 - - - - - 0.964 Mlig455_025826 {REF} {Length: 1670} {Pfam: EF hand [PF00036.34, score=107.9]; EF-hand domain pair [PF13499.8, score=105.5]; EF hand [PF13202.8, score=83.6]; EF-hand domain pair [PF13833.8, score=83.3]; EF-hand domain [PF13405.8, score=75.8]; EF-hand domain [PF14658.8, score=35.5]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=29.8]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=27.8]; Dockerin type I domain [PF00404.20, score=20.3]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=93.2, Expect=3e-24]; ENSG00000198668, CALM1, calmodulin 1, [Score=93.2, Expect=3e-24]; ENSG00000160014, CALM3, calmodulin 3, [Score=93.2, Expect=3e-24]; ENSG00000178363, CALML3, calmodulin like 3, [Score=92.8, Expect=4e-24]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=99.8, Expect=5e-27]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=91.3, Expect=6e-24]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=90.9, Expect=9e-24]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=90.9, Expect=7e-24]} {RNA1509_52504} {RNA1310_7529} {RNA815_34450}
80. MligTC455_02749 14 0.28 Mlig455_068848

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_068848 {REF} {Length: 518} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_120999} {RNA815_9691}
81. MligTC455_09119 19 0.39 Mlig455_018709, Mlig455_046202, Mlig455_068557

Neo: -

Age: -

 0.963 - - - - 0.963 -

Mlig455_018709 {REF} {Length: 149} {NoTransDecoderORF} {RNA1310_130271}

Mlig455_046202 {REF} {Length: 140} {NoTransDecoderORF} {RNA1310_130271}

Mlig455_068557 {REF} {Length: 288} {NoTransDecoderORF} {RNA1310_130271}
82. MligTC455_18549 35 0.72 Mlig455_003836

Neo: -

Age: Up-Down-Down

 0.963 - - - - 0.963 - Mlig455_003836 {REF} {Length: 1990} {RNA1509_32165} {RNA1310_13450} {RNA815_5462.1}
83. MligTC455_38354 15 0.31 Mlig455_058596

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_058596 {REF} {Length: 1131} {NoTransDecoderORF} {RNA1310_139293} {RNA815_39449.2}
84. MligTC455_52292 114 2.37 Mlig455_018142

Neo: -

Age: Down-Up-Down

 0.963 - - - - 0.963 - Mlig455_018142 {REF} {Length: 3358} {RNA1509_41463} {RNA1310_26044.1} {RNA815_6737}
85. MligTC455_35250 61 1.26 Mlig455_000731

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_000731 {REF} {Length: 2188} {Celegans: WBGene00015646, mlt-10, [Score=168, Expect=5e-47]} {RNA1509_6125} {RNA1310_26090} {RNA815_7336}
86. MligTC455_36770 30 0.63 Mlig455_032449

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_032449 {REF} {Length: 657} {NoTransDecoderORF} {RNA1310_93637}
87. MligTC455_40508 42 0.88 Mlig455_041263, Mlig455_053074

Neo: -

Age: Up-Down-Up

 0.962 - - - - - 0.962

Mlig455_041263 {REF} {Length: 3567} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=22.8]; Ankyrin repeats (many copies) [PF13637.8, score=21.5]} {RNA1310_40323} {RNA815_53708}

Mlig455_053074 {REF} {Length: 6700} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=21.1]; Ankyrin repeats (3 copies) [PF12796.9, score=20.3]} {RNA1310_40323} {RNA815_53708}
88. MligTC455_51789 175 3.64 Mlig455_067392

Neo: -

Age: logFC(26M/2M)=0.643

 SPEG 0.962 - - - - - 0.962 Mlig455_067392 {REF} {Length: 1915} {TRANSSPLICED} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=106.9]; Immunoglobulin domain [PF13927.8, score=74.6]; Immunoglobulin domain [PF13895.8, score=43.7]; Immunoglobulin domain [PF00047.27, score=43.2]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.0]} {Human: ENSG00000072195, SPEG, SPEG complex locus, [Score=89.7, Expect=4e-19]} {Mouse: ENSMUSG00000022836, Mylk, myosin, light polypeptide kinase, [Score=86.3, Expect=6e-18]; ENSMUSG00000026207, Speg, SPEG complex locus, [Score=85.1, Expect=1e-17]} {Dmel: FBgn0052311, zormin, [Score=84.0, Expect=2e-17]} {Celegans: WBGene00004130, ketn-1, KETtiN (Drosophila actin-binding) homolog; Kettin, [Score=80.1, Expect=3e-16]} {Smed: dd_Smed_v6_3381_0_1, dd_Smed_v6_3381_0_1, [Score=97.8, Expect=3e-22]} {RNA1509_46253} {RNA1310_14115, RNA1509_46253} {RNA1509_46253, RNA815_27903}
89. MligTC455_11470 27 0.57 Mlig455_029491, Mlig455_029511

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.087

 KIAA1958 0.961 - - - - 0.961 -

Mlig455_029491 {REF} {Length: 3807} {RNA1509_9734} {RNA1310_54822} {RNA815_42052}

Mlig455_029511 {REF} {Length: 2220} {Pfam: Domain of unknown function (DUF3504) [PF12012.10, score=67.7]; SH3 domain [PF17902.3, score=34.1]} {Human: ENSG00000165185, KIAA1958, KIAA1958, [RH, Score=62.0, Expect=2e-09]} {Mouse: ENSMUSG00000045071, E130308A19Rik, RIKEN cDNA E130308A19 gene, [RH, Score=61.2, Expect=3e-09]} {Dmel: FBgn0013733, shot, short stop, [Score=51.6, Expect=2e-06]} {RNA1509_6477} {RNA1310_54822} {RNA815_2208}
90. MligTC455_40522 114 2.38 Mlig455_047004, Mlig455_047037

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.014

 ANGPTL3 0.961 - - - - - 0.961

Mlig455_047004 {REF} {Length: 1341} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=62.5]} {Human: ENSG00000132855, ANGPTL3, angiopoietin like 3, [Score=57.0, Expect=8e-09]} {Mouse: ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=52.0, Expect=2e-07]} {Dmel: FBgn0031804, CG9500, [Score=71.2, Expect=2e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=50.1, Expect=6e-07]} {RNA1509_53291} {RNA1310_30694.1} {RNA815_9881}

Mlig455_047037 {REF} {Length: 1945} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=60.2]} {Human: ENSG00000132855, ANGPTL3, angiopoietin like 3, [Score=58.9, Expect=8e-09]} {Mouse: ENSMUSG00000022309, Angpt1, angiopoietin 1, [Score=53.1, Expect=4e-07]} {Dmel: FBgn0031804, CG9500, [Score=72.8, Expect=4e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=53.5, Expect=1e-07]} {RNA1509_53291} {RNA1310_30694.1} {RNA815_9881}
91. MligTC455_34071 49 1.03 Mlig455_062246

Neo: -

Age: -

 0.96 - - - - 0.960 - Mlig455_062246 {REF} {Length: 1821} {NoTransDecoderORF} {RNA1509_60021} {RNA1310_45304} {RNA815_29039.1}
92. MligTC455_39057 57 1.18 Mlig455_013966

Neo: Int S/G2/M

Age: -

 0.96 - - - - 0.960 - Mlig455_013966 {REF} {Length: 1262} {NoTransDecoderORF} {RNA1310_104321}
93. MligTC455_06956 10 0.21 Mlig455_015248

Neo: -

Age: Down-Down-Up

 WDR31 0.959 - - - - 0.959 - Mlig455_015248 {REF} {Length: 2016} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=63.8]} {Human: ENSG00000148225, WDR31, WD repeat domain 31, [Score=177, Expect=6e-50]} {Mouse: ENSMUSG00000028391, Wdr31, WD repeat domain 31, [Score=170, Expect=1e-47]} {Dmel: FBgn0020618, Rack1, Receptor of activated protein kinase C 1, [Score=56.2, Expect=3e-08]} {Celegans: WBGene00015646, mlt-10, [Score=172, Expect=3e-46]} {Smed: dd_Smed_v6_10263_0_1, dd_Smed_v6_10263_0_1, [RH, Score=160, Expect=1e-44]} {RNA1509_37630} {RNA1310_25250.2} {RNA815_12696}
94. MligTC455_18454 37 0.78 Mlig455_025691

Neo: -

Age: -

Region-enriched R2: 4.778/0.02984

 0.959 - - - - - 0.959 Mlig455_025691 {REF} {Length: 1813} {RNA1310_101808}
95. MligTC455_25403 79 1.66 Mlig455_036259, Mlig455_040819

Neo: -

Age: Up-Down-Up

 GVQW3 0.959 - - - - 0.959 -

Mlig455_036259 {REF} {Length: 1703} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=38.6]; Homeodomain-like domain [PF13565.8, score=30.1]; HTH domain in Mos1 transposase [PF17906.3, score=25.3]; Winged helix-turn helix [PF13551.8, score=18.5]} {Human: ENSG00000179240, GVQW3, GVQW motif containing 3, [Score=56.2, Expect=1e-08]} {RNA1509_55432} {RNA1310_7362.1} {RNA815_6705.1}

Mlig455_040819 {REF} {Length: 1465} {Pfam: Putative DNA-binding domain [PF04326.16, score=33.6]} {RNA1509_47755} {RNA1310_37975} {RNA815_40947}
96. MligTC455_48573 49 1.02 Mlig455_060057

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_060057 {REF} {Length: 2911} {RNA1509_38551} {RNA1310_97504} {RNA815_14106}
97. MligTC455_48582 11 0.24 Mlig455_018988

Neo: -

Age: -

 ANGPTL1 0.959 - - - - 0.959 - Mlig455_018988 {REF} {Length: 1198} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=125.4]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=95.9, Expect=9e-22]; ENSG00000116147, TNR, tenascin R, [Score=94.7, Expect=4e-21]; ENSG00000160339, FCN2, ficolin 2, [Score=91.3, Expect=9e-21]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=94.4, Expect=4e-21]; ENSMUSG00000015829, Tnr, tenascin R, [Score=94.4, Expect=4e-21]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=91.3, Expect=2e-20]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=90.9, Expect=4e-20]} {Dmel: FBgn0050280, CG30280, [Score=89.0, Expect=2e-20]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_58275} {RNA815_44587}
98. MligTC455_50044 54 1.12 Mlig455_012099

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_012099 {REF} {Length: 804} {NoTransDecoderORF} {RNA1509_48232} {RNA1310_60087, RNA1509_48232} {RNA1509_48232, RNA815_14770.1}
99. MligTC455_03361 23 0.49 Mlig455_045846

Neo: -

Age: -

Regeneration-enriched R4: 8.309
Regeneration-enriched R3: 7.698
Regeneration-enriched R5: 6.907
Regeneration-enriched R2: 5.726

 0.958 - - - - 0.958 - Mlig455_045846 {REF} {Length: 525} {RNA1310_134422} {RNA815_64754}
100. MligTC455_08711 57 1.2 Mlig455_012935

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_012935 {REF} {Length: 1084} {NoTransDecoderORF} {RNA1509_35472} {RNA1310_49774} {RNA815_41460.1}

There are 45 more genes with r >= 0.95  Show all


Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA