Data search


search
Exact
Search

Results for MligTC455_50044

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50044 54 1.12 Mlig455_012099

Neo: -

Age: -

Mlig455_012099 {REF} {Length: 804} {NoTransDecoderORF} {RNA1509_48232} {RNA1310_60087, RNA1509_48232} {RNA1509_48232, RNA815_14770.1}

Cumulative graph for MligTC455_50044

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.099 1.412 0.72957 1.00000
RegionR2 1.845 1.412 0.20875 0.57194
RegionR3 -1.073 1.412 0.99723 1.00000
RegionR4 0.91 1.412 0.44971 0.77853
RegionR5 -0.465 1.412 0.96676 1.00000
RegionR6 -0.315 1.412 0.94507 1.00000
RegionR7 -0.336 1.412 0.95844 1.00000
RegionR8 1.532 1.412 0.55638 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.043 1.412 0.99989 1.00000
RegenerationR2 0.269 1.412 0.76199 0.97724
RegenerationR3 2.172 1.412 0.13883 0.56501
RegenerationR4 0.903 1.412 0.41553 0.82354
RegenerationR5 1.824 1.412 0.10229 0.48647
RegenerationR6 2.285 1.412 0.08534 0.36572
RegenerationBL -1.347 1.412 0.59761 0.94520
RegenerationTP 2.015 1.412 0.25020 0.69749


Genes with expression patterns similar to MligTC455_50044

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50044 54 1.12 Mlig455_012099

Neo: -

Age: -

4 - - 1.000 1.000 1.000 1.000 Mlig455_012099 {REF} {Length: 804} {NoTransDecoderORF} {RNA1509_48232} {RNA1310_60087, RNA1509_48232} {RNA1509_48232, RNA815_14770.1}
2. MligTC455_29853 45 0.94 Mlig455_026579, Mlig455_044780, Mlig455_054135

Neo: -

Age: -

1.836 - - - - 0.861 0.975

Mlig455_026579 {REF} {Length: 430} {RNA1310_43414}

Mlig455_044780 {REF} {Length: 430} {RNA1310_43414}

Mlig455_054135 {REF} {Length: 4050} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=27.4]} {RNA1509_13774} {RNA1310_6053.2} {RNA815_16908}
3. MligTC455_11909 169 3.52 Mlig455_029260, Mlig455_035646, Mlig455_035747

Neo: -

Age: -

Region-enriched R2: 5.335/0.01330
Region-enriched R6: 5.326/0.00202

1.757 - - - - 0.793 0.964

Mlig455_029260 {REF} {Length: 507} {RNA1310_75480.1} {RNA815_45038}

Mlig455_035646 {REF} {Length: 507} {RNA1310_75480.1} {RNA815_45038}

Mlig455_035747 {REF} {Length: 507} {RNA1310_75480.1} {RNA815_45038}
4. MligTC455_01485 65 1.34 Mlig455_001469

Neo: -

Age: -

0.975 - - - - 0.975 - Mlig455_001469 {REF} {Length: 445}
5. MligTC455_06090 223 4.65 Mlig455_037743

Neo: -

Age: Down-Up-Up

0.966 - - - - 0.966 - Mlig455_037743 {REF} {Length: 1087} {RNA1509_10108} {RNA1310_12853.1} {RNA815_29647}
6. MligTC455_21770 21 0.43 Mlig455_050611

Neo: -

Age: -

0.965 - - - - 0.965 - Mlig455_050611 {REF} {Length: 3632} {RNA1509_59214} {RNA1310_36395} {RNA815_11419.1}
7. MligTC455_10776 11 0.22 Mlig455_032885

Neo: -

Age: -

0.961 - - - - 0.961 - Mlig455_032885 {REF} {Length: 215} {NoTransDecoderORF} {RNA1310_126376} {RNA815_59053.1}
8. MligTC455_38809 89 1.85 Mlig455_010159, Mlig455_018689, Mlig455_018690, Mlig455_040237, Mlig455_051161, Mlig455_055776, Mlig455_058202, Mlig455_068783

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.196

0.961 - - - - 0.961 -

Mlig455_010159 {REF} {Length: 4808} {Pfam: Integrase zinc binding domain [PF17921.3, score=65.5]; Integrase core domain [PF00665.28, score=45.9]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_018689 {REF} {Length: 383} {Pfam: Zinc knuckle [PF00098.25, score=35.4]} {RNA1509_37828} {RNA1310_12941} {RNA815_12994}

Mlig455_018690 {REF} {Length: 824} {Pfam: Integrase zinc binding domain [PF17921.3, score=66.8]; Integrase core domain [PF00665.28, score=28.1]; H2C2 zinc finger [PF09337.12, score=19.0]} {RNA1509_37828} {RNA1310_20398} {RNA815_3168.1}

Mlig455_040237 {REF} {Length: 407} {Pfam: Integrase core domain [PF00665.28, score=27.8]} {RNA1509_12358} {RNA1310_2289} {RNA815_3168.1}

Mlig455_051161 {REF} {Length: 2606} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=99.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=81.6]; Integrase zinc binding domain [PF17921.3, score=64.8]; Integrase core domain [PF00665.28, score=48.7]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=5e-27]} {RNA1509_37828} {RNA1310_2289} {RNA815_3168.1}

Mlig455_055776 {REF} {Length: 4218} {Pfam: Integrase zinc binding domain [PF17921.3, score=59.5]; Integrase core domain [PF00665.28, score=49.2]} {RNA1509_12358} {RNA1310_2289, RNA1509_12358} {RNA1509_12358, RNA815_3168.1}

Mlig455_058202 {REF} {Length: 1723} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=42.0]; Aspartyl protease [PF13650.8, score=31.2]; gag-polyprotein putative aspartyl protease [PF13975.8, score=28.1]; Zinc knuckle [PF00098.25, score=27.2]; Aspartyl protease [PF09668.12, score=20.1]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=101, Expect=3e-22]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}

Mlig455_068783 {REF} {Length: 3243} {Pfam: Aspartyl protease [PF13650.8, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=27.5]; Aspartyl protease [PF09668.12, score=23.3]} {RNA1509_12358} {RNA1310_2927} {RNA815_12994}
9. MligTC455_17061 25 0.52 Mlig455_059363

Neo: -

Age: -

Regeneration-enriched R4: 8.762
Regeneration-enriched R3: 8.244
Regeneration-enriched R5: 7.052
Regeneration-enriched R2: 6.670

0.959 - - - - 0.959 - Mlig455_059363 {REF} {Length: 588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_51606} {RNA1310_24468.1} {RNA815_39459}
10. MligTC455_44831 134 2.79 Mlig455_067116

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.186

MICU3 0.959 - - 0.959 - - - Mlig455_067116 {REF} {Length: 4117} {Pfam: Carboxylesterase family [PF00135.30, score=337.3]; EF-hand domain pair [PF13833.8, score=34.2]; EF-hand domain pair [PF13499.8, score=33.6]; EF-hand domain [PF13405.8, score=32.7]; EF hand [PF00036.34, score=21.1]} {Human: ENSG00000155970, MICU3, mitochondrial calcium uptake family member 3, [Score=254, Expect=5e-75]} {Mouse: ENSMUSG00000039478, Micu3, mitochondrial calcium uptake family, member 3, [Score=228, Expect=6e-64]} {Dmel: FBgn0038735, CG4662, [Score=256, Expect=2e-74]} {Celegans: WBGene00008345, C56A3.6, [Score=202, Expect=1e-56]} {Smed: dd_Smed_v6_5430_0_1, dd_Smed_v6_5430_0_1, [Score=190, Expect=5e-52]} {RNA1509_10255} {RNA1310_6017} {RNA815_1818}
11. MligTC455_33602 99 2.06 Mlig455_025373, Mlig455_025421

Neo: -

Age: Down-Up-Down

0.957 - - - - - 0.957

Mlig455_025373 {REF} {Length: 1900} {RNA1310_26653} {RNA815_18547}

Mlig455_025421 {REF} {Length: 1816} {RNA1310_26653} {RNA815_18547}
12. MligTC455_44011 149 3.11 Mlig455_018977

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.381

Region-enriched R4: 3.309/0.04341

0.957 - - - - 0.957 - Mlig455_018977 {REF} {Length: 1398} {RNA1509_51989} {RNA1310_26186.1, RNA1509_51989} {RNA1509_51989, RNA815_21629}
13. MligTC455_48582 11 0.24 Mlig455_018988

Neo: -

Age: -

ANGPTL1 0.957 - - - - 0.957 - Mlig455_018988 {REF} {Length: 1198} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=125.4]} {Human: ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=95.9, Expect=9e-22]; ENSG00000116147, TNR, tenascin R, [Score=94.7, Expect=4e-21]; ENSG00000160339, FCN2, ficolin 2, [Score=91.3, Expect=9e-21]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=94.4, Expect=4e-21]; ENSMUSG00000015829, Tnr, tenascin R, [Score=94.4, Expect=4e-21]; ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=91.3, Expect=2e-20]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=90.9, Expect=4e-20]} {Dmel: FBgn0050280, CG30280, [Score=89.0, Expect=2e-20]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=85.9, Expect=1e-18]} {RNA1310_58275} {RNA815_44587}
14. MligTC455_20269 75 1.57 Mlig455_032480

Neo: -

Age: -

CACNG5 0.956 - - - - - 0.956 Mlig455_032480 {REF} {Length: 2885} {Pfam: PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=68.8]; PMP-22/EMP/MP20/Claudin family [PF00822.22, score=50.3]} {Human: ENSG00000075429, CACNG5, calcium voltage-gated channel auxiliary subunit gamma 5, [RH, Score=105, Expect=7e-25]} {Mouse: ENSMUSG00000040373, Cacng5, calcium channel, voltage-dependent, gamma subunit 5, [RH, Score=104, Expect=8e-25]} {Dmel: FBgn0064123, stg1, stargazin-like protein, [RH, Score=68.6, Expect=4e-12]} {Smed: dd_Smed_v6_20066_0_1, dd_Smed_v6_20066_0_1, [RH, Score=217, Expect=2e-64]} {RNA1310_28766} {RNA815_15582}
15. MligTC455_30505 183 3.81 Mlig455_046017

Neo: -

Age: -

CHRNA3 0.956 - - - - 0.956 - Mlig455_046017 {REF} {Length: 2653} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=200.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=164.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=338, Expect=9e-110]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=329, Expect=2e-106]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=345, Expect=6e-113]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=334, Expect=1e-108]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=395, Expect=3e-132]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=335, Expect=3e-109]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=475, Expect=5e-164]} {RNA1509_13864, RNA1509_48088} {RNA1310_13542, RNA1509_48088} {RNA1509_48088, RNA815_5136}
16. MligTC455_04214 13 0.27 Mlig455_022345

Neo: -

Age: -

HCN4 0.955 - - - - 0.955 - Mlig455_022345 {REF} {Length: 4342} {Pfam: Ion transport protein N-terminal [PF08412.12, score=85.6]; Ion transport protein [PF00520.33, score=81.4]} {Human: ENSG00000138622, HCN4, hyperpolarization activated cyclic nucleotide gated potassium channel 4, [Score=517, Expect=7e-169]; ENSG00000164588, HCN1, hyperpolarization activated cyclic nucleotide gated potassium channel 1, [Score=504, Expect=1e-167]; ENSG00000099822, HCN2, hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2, [Score=498, Expect=4e-165]; ENSG00000263324, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]; ENSG00000143630, HCN3, hyperpolarization activated cyclic nucleotide gated potassium channel 3, [Score=492, Expect=3e-164]} {Mouse: ENSMUSG00000032338, Hcn4, hyperpolarization-activated, cyclic nucleotide-gated K+ 4, [Score=510, Expect=2e-166]; ENSMUSG00000021730, Hcn1, hyperpolarization-activated, cyclic nucleotide-gated K+ 1, [Score=506, Expect=5e-168]; ENSMUSG00000020331, Hcn2, hyperpolarization-activated, cyclic nucleotide-gated K+ 2, [Score=500, Expect=2e-166]; ENSMUSG00000028051, Hcn3, hyperpolarization-activated, cyclic nucleotide-gated K+ 3, [Score=494, Expect=2e-165]} {Dmel: FBgn0263397, Ih, I[[h]] channel, [Score=611, Expect=0.0]} {Celegans: WBGene00006526, tax-4, Cyclic nucleotide-gated cation channel, [Score=110, Expect=6e-25]} {Smed: dd_Smed_v6_13408_0_1, dd_Smed_v6_13408_0_1, [Score=741, Expect=0.0]} {RNA1509_8719} {RNA1310_25014} {RNA815_22259}
17. MligTC455_16356 24 0.5 Mlig455_022161

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.557

Region-enriched R4: 5.112/0.01161

0.955 - - - - 0.955 - Mlig455_022161 {REF} {Length: 4044} {RNA1509_57484} {RNA1310_40819} {RNA815_38037}
18. MligTC455_30722 33 0.69 Mlig455_041192

Neo: -

Age: logFC(26M/2M)=1.757

0.955 - - - - 0.955 - Mlig455_041192 {REF} {Length: 1796} {Pfam: Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=23.2]} {RNA1509_40809} {RNA1310_246.1} {RNA815_33502.1}
19. MligTC455_07748 7 0.14 Mlig455_008972

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_008972 {REF} {Length: 898} {RNA1310_52744} {RNA815_35003}
20. MligTC455_16559 61 1.26 Mlig455_050729

Neo: -

Age: -

Region-enriched R3: 4.650/0.00893

C9orf116 0.953 - - - - 0.953 - Mlig455_050729 {REF} {Length: 952} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4490) [PF14892.8, score=113.1]} {Human: ENSG00000160345, C9orf116, chromosome 9 open reading frame 116, [RH, Score=81.3, Expect=2e-20]} {Mouse: ENSMUSG00000026831, 1700007K13Rik, RIKEN cDNA 1700007K13 gene, [RH, Score=82.4, Expect=8e-21]} {Dmel: FBgn0083943, CG34107, [RH, Score=64.7, Expect=2e-14]} {Smed: dd_Smed_v6_49903_0_1, dd_Smed_v6_49903_0_1, [RH, Score=73.2, Expect=4e-17]} {RNA1509_36646} {RNA1310_50869, RNA1509_36646} {RNA1509_36646, RNA815_31506}
21. MligTC455_20370 41 0.85 Mlig455_046379

Neo: -

Age: Down-Up-Down

0.953 - - - - 0.953 - Mlig455_046379 {REF} {Length: 1870} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=23.6]; Retroviral aspartyl protease [PF00077.22, score=19.6]; Family of unknown function (DUF5537) [PF17690.3, score=19.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=76.3, Expect=3e-14]} {RNA1509_51609} {RNA1310_24791} {RNA815_28268}
22. MligTC455_27775 97 2.02 Mlig455_018548

Neo: Irradiation

Age: -

ATAD5 0.951 - - - - 0.951 - Mlig455_018548 {REF} {Length: 4116} {TRANSSPLICED} {Human: ENSG00000176208, ATAD5, ATPase family, AAA domain containing 5, [RH, Score=77.4, Expect=1e-13]} {Mouse: ENSMUSG00000017550, Atad5, ATPase family, AAA domain containing 5, [RH, Score=76.3, Expect=2e-13]} {Dmel: FBgn0036574, elg1, enhanced level of genomic instability 1, [Score=51.6, Expect=4e-06]} {Celegans: WBGene00013156, Y53F4B.9, [Score=51.2, Expect=4e-06]} {RNA1509_17564} {RNA1310_10601.1, RNA1509_17564} {RNA1509_17564, RNA815_24292}
23. MligTC455_47219 259 5.4 Mlig455_036855

Neo: -

Age: logFC(26M/2M)=-0.291

PCSK4 0.951 - - - - - 0.951 Mlig455_036855 {REF} {Length: 3656} {TRANSSPLICED} {Pfam: Subtilase family [PF00082.24, score=139.0]; Proprotein convertase P-domain [PF01483.22, score=44.8]; Peptidase S8 pro-domain [PF16470.7, score=30.4]} {Human: ENSG00000115257, PCSK4, proprotein convertase subtilisin/kexin type 4, [Score=370, Expect=1e-116]; ENSG00000175426, PCSK1, proprotein convertase subtilisin/kexin type 1, [Score=353, Expect=3e-110]} {Mouse: ENSMUSG00000020131, Pcsk4, proprotein convertase subtilisin/kexin type 4, [Score=357, Expect=3e-113]; ENSMUSG00000021587, Pcsk1, proprotein convertase subtilisin/kexin type 1, [Score=351, Expect=2e-109]; ENSMUSG00000027419, Pcsk2, proprotein convertase subtilisin/kexin type 2, [Score=341, Expect=3e-107]} {Dmel: FBgn0004509, Fur1, Furin 1, [Score=327, Expect=1e-99]} {Celegans: WBGene00002232, kpc-1, Furin-like protease kpc-1, [Score=360, Expect=7e-114]} {Smed: dd_Smed_v6_8406_0_3, dd_Smed_v6_8406_0_3, [Score=317, Expect=3e-98]} {RNA1509_13233, RNA1509_24679, RNA1509_3476, RNA1509_57220} {RNA1310_9937, RNA1509_13233, RNA1509_24679, RNA1509_57220} {RNA1509_13233, RNA1509_24679, RNA1509_57220, RNA815_2907}
24. MligTC455_35250 61 1.26 Mlig455_000731

Neo: -

Age: -

0.95 - - - - 0.950 - Mlig455_000731 {REF} {Length: 2188} {Celegans: WBGene00015646, mlt-10, [Score=168, Expect=5e-47]} {RNA1509_6125} {RNA1310_26090} {RNA815_7336}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA