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Results for MligTC455_17078

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17078 514 10.70 Mlig455_019915

Neo: Irradiation

Age: Up-Up-Down

 Mlig455_019915 {REF} {Length: 2817} {RNA1509_29099} {RNA1310_24554} {RNA815_5067.1}

Cumulative graph for MligTC455_17078

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.828 3.555 0.41545 1.00000
RegionR2 1.003 3.555 0.02710 0.18532
RegionR3 -0.941 3.555 0.02441 0.26660
RegionR4 0.333 3.555 0.37595 0.69987
RegionR5 -0.211 3.555 0.52497 0.88741
RegionR6 -0.474 3.555 0.25602 0.84116
RegionR7 0.589 3.555 0.24681 0.87320
RegionR8 0.529 3.555 0.41255 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.77 3.555 0.16394 0.90580
RegenerationR2 -0.173 3.555 0.63263 0.92836
RegenerationR3 1.391 3.555 0.00209 0.07845
RegenerationR4 -0.606 3.555 0.11957 0.52670
RegenerationR5 0.667 3.555 0.06363 0.39917
RegenerationR6 0.376 3.555 0.44253 0.76577
RegenerationBL -0.602 3.555 0.34651 0.71385
RegenerationTP 0.638 3.555 0.22596 0.67077


Genes with expression patterns similar to MligTC455_17078

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17078 514 10.7 Mlig455_019915

Neo: Irradiation

Age: Up-Up-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_019915 {REF} {Length: 2817} {RNA1509_29099} {RNA1310_24554} {RNA815_5067.1}
2. MligTC455_17079 456 9.51 Mlig455_047957

Neo: -

Age: logFC(26M/2M)=-0.386

 5.494 0.939 0.898 0.773 0.946 0.979 0.959 Mlig455_047957 {REF} {Length: 4371} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=32.8]} {RNA1509_2662, RNA1509_52042} {RNA1310_2647.1, RNA1509_52042} {RNA1509_52042, RNA815_640}
3. MligTC455_32802 82 1.71 Mlig455_058732

Neo: Int S/G2/M

Age: -

 CLEC16A 0.978 - - - - - 0.978 Mlig455_058732 {REF} {Length: 5696} {TRANSSPLICED} {Pfam: CLEC16A C-terminal [PF19439.1, score=338.2]; Uncharacterised conserved protein [PF09758.11, score=191.5]} {Human: ENSG00000038532, CLEC16A, C-type lectin domain containing 16A, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000068663, Clec16a, C-type lectin domain family 16, member A, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0038427, ema, endosomal maturation defective, [RH, Score=692, Expect=0.0]} {Celegans: WBGene00001660, gop-1, Protein CLEC16A homolog, [RH, Score=310, Expect=4e-89]} {Smed: dd_Smed_v6_3621_0_1, dd_Smed_v6_3621_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_19027} {RNA1310_5561.1} {RNA815_6181}
4. MligTC455_07316 373 7.77 Mlig455_000488

Neo: Irradiation

Age: Down-Up-Down

 SIN3A 0.967 - - - - - 0.967 Mlig455_000488 {REF} {Length: 4419} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=95.9]; Paired amphipathic helix repeat [PF02671.23, score=90.8]; Sin3 family co-repressor [PF08295.14, score=90.8]} {Human: ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=299, Expect=2e-83]} {Mouse: ENSMUSG00000042557, Sin3a, transcriptional regulator, SIN3A (yeast), [Score=338, Expect=5e-97]} {Dmel: FBgn0022764, Sin3A, [Score=250, Expect=3e-67]} {Celegans: WBGene00004117, sin-3, Paired amphipathic helix protein sin-3, [Score=110, Expect=5e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=211, Expect=2e-55]} {RNA1509_41252, RNA1509_4899} {RNA1310_4266.2, RNA1509_41252, RNA1509_4899} {RNA1509_41252, RNA1509_4899, RNA815_1997}
5. MligTC455_37460 252 5.25 Mlig455_054249

Neo: Int S/G2/M

Age: logFC(26M/2M)=1.015

 MFSD3 0.966 - - 0.966 - - - Mlig455_054249 {REF} {Length: 2521} {TRANSSPLICED} {Human: ENSG00000167700, MFSD3, major facilitator superfamily domain containing 3, [Score=105, Expect=6e-25]} {Mouse: ENSMUSG00000019080, Mfsd3, major facilitator superfamily domain containing 3, [Score=107, Expect=6e-26]} {Smed: dd_Smed_v6_18318_0_1, dd_Smed_v6_18318_0_1, [Score=171, Expect=5e-50]} {RNA1509_41389} {RNA1310_7558} {RNA815_29269}
6. MligTC455_25847 254 5.29 Mlig455_016979, Mlig455_021250

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.403

 SDC1 0.964 - - - - - 0.964

Mlig455_016979 {REF} {Length: 3271} {Pfam: SEA domain [PF01390.22, score=29.3]} {RNA1509_4593} {RNA1310_11748.2} {RNA815_4087}

Mlig455_021250 {REF} {Length: 3865} {TRANSSPLICED} {Pfam: Syndecan domain [PF01034.22, score=65.6]; SEA domain [PF01390.22, score=22.9]} {Human: ENSG00000115884, SDC1, syndecan 1, [Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000020592, Sdc1, syndecan 1, [Score=59.3, Expect=8e-09]} {Dmel: FBgn0010415, Sdc, Syndecan, [RH, Score=72.8, Expect=4e-13]} {Celegans: WBGene00004749, sdn-1, Probable syndecan, [RH, Score=63.2, Expect=2e-10]} {Smed: dd_Smed_v6_14098_0_1, dd_Smed_v6_14098_0_1, [Score=66.6, Expect=1e-11]} {RNA1509_11964} {RNA1310_822.1} {RNA815_3622}
7. MligTC455_23620 579 12.06 Mlig455_015298

Neo: -

Age: Up-Down-Down

 SFMBT2 0.963 - - - - - 0.963 Mlig455_015298 {REF} {Length: 5445} {Pfam: mbt repeat [PF02820.20, score=112.7]; SLED domain [PF12140.10, score=85.5]} {Human: ENSG00000198879, SFMBT2, Scm like with four mbt domains 2, [RH, Score=313, Expect=1e-91]} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [RH, Score=268, Expect=2e-75]} {Dmel: FBgn0032475, Sfmbt, Scm-related gene containing four mbt domains, [Score=81.6, Expect=2e-15]} {Smed: dd_Smed_v6_4835_0_1, dd_Smed_v6_4835_0_1, [Score=203, Expect=4e-54]} {RNA1509_11523} {RNA1310_4982.2, RNA1509_11523} {RNA1509_11523, RNA815_1974}
8. MligTC455_45893 211 4.4 Mlig455_026742, Mlig455_051753

Neo: -

Age: -

 GRAMD4 0.963 - - - - 0.963 -

Mlig455_026742 {REF} {Length: 3564} {Pfam: GRAM domain [PF02893.22, score=38.6]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=34.6]; Integral peroxisomal membrane peroxin [PF06398.13, score=26.8]; Protein of unknown function (DUF3292) [PF11696.10, score=25.2]} {Human: ENSG00000075240, GRAMD4, GRAM domain containing 4, [RH, Score=230, Expect=1e-66]} {Mouse: ENSMUSG00000035900, Gramd4, GRAM domain containing 4, [RH, Score=235, Expect=5e-68]} {RNA1509_56811} {RNA1310_5024} {RNA815_10887}

Mlig455_051753 {REF} {Length: 3472} {Pfam: GRAM domain [PF02893.22, score=38.6]; Plant phosphoribosyltransferase C-terminal [PF08372.12, score=34.6]; Integral peroxisomal membrane peroxin [PF06398.13, score=26.8]; Protein of unknown function (DUF3292) [PF11696.10, score=25.2]} {Human: ENSG00000075240, GRAMD4, GRAM domain containing 4, [RH, Score=230, Expect=1e-66]} {Mouse: ENSMUSG00000035900, Gramd4, GRAM domain containing 4, [RH, Score=235, Expect=5e-68]} {RNA1509_56811} {RNA1310_5024} {RNA815_10887}
9. MligTC455_03722 610 12.71 Mlig455_021378

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.431

 POU6F2 0.96 - - - - - 0.960 Mlig455_021378 {REF} {Length: 3493} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=101.1]; Uncharacterized conserved domain (SAYSvFN) [PF10260.11, score=75.9]; Homeodomain [PF00046.31, score=59.3]} {Human: ENSG00000106536, POU6F2, POU class 6 homeobox 2, [RH, Score=247, Expect=1e-71]} {Mouse: ENSMUSG00000009734, Pou6f2, POU domain, class 6, transcription factor 2, [RH, Score=247, Expect=3e-72]} {Dmel: FBgn0261588, pdm3, pou domain motif 3, [RH, Score=243, Expect=2e-67]} {Celegans: WBGene00000441, ceh-18, Homeobox protein ceh-18, [Score=123, Expect=2e-29]} {Smed: dd_Smed_v6_13010_0_1, dd_Smed_v6_13010_0_1, [RH, Score=231, Expect=2e-67]} {RNA1509_23034} {RNA1310_7430} {RNA815_11647}
10. MligTC455_06327 233 4.84 Mlig455_055562

Neo: -

Age: -

Region-enriched R7: 1.919/0.03469

 SVEP1 0.96 - - 0.960 - - - Mlig455_055562 {REF} {Length: 5845} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=38.0]; Human growth factor-like EGF [PF12661.9, score=29.8]; EGF-like domain [PF07974.15, score=21.0]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=105, Expect=1e-22]; ENSG00000235396, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000223355, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000204301, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000234876, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000206312, NOTCH4, notch 4, [Score=103, Expect=6e-22]; ENSG00000232339, NOTCH4, notch 4, [Score=103, Expect=6e-22]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=92.8, Expect=8e-19]; ENSMUSG00000027878, Notch2, notch 2, [Score=88.6, Expect=2e-17]} {Dmel: FBgn0051665, wry, weary, [Score=118, Expect=5e-27]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=84.7, Expect=2e-16]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=103, Expect=2e-22]} {RNA1509_34591} {RNA1310_8018.1} {RNA815_13609}
11. MligTC455_31335 415 8.65 Mlig455_068046

Neo: -

Age: -

 POLM 0.959 - - - - - 0.959 Mlig455_068046 {REF} {Length: 7697} {Pfam: DNA polymerase beta thumb [PF14791.8, score=75.4]; hAT family C-terminal dimerisation region [PF05699.16, score=30.7]; Amiloride-sensitive sodium channel [PF00858.26, score=29.6]; Fingers domain of DNA polymerase lambda [PF10391.11, score=24.9]; DNA polymerase beta palm [PF14792.8, score=23.6]} {Human: ENSG00000122678, POLM, DNA polymerase mu, [Score=216, Expect=2e-60]} {Mouse: ENSMUSG00000020474, Polm, polymerase (DNA directed), mu, [RH, Score=228, Expect=5e-65]} {RNA1509_24552} {RNA1310_8091.1} {RNA815_3041}
12. MligTC455_43868 156 3.25 Mlig455_017547, Mlig455_026836, Mlig455_030859

Neo: -

Age: -

 0.958 - - 0.958 - - -

Mlig455_017547 {REF} {Length: 714} {NoTransDecoderORF} {RNA1509_18737} {RNA1310_41455} {RNA815_25554}

Mlig455_026836 {REF} {Length: 714} {NoTransDecoderORF} {RNA1509_18737} {RNA1310_41455} {RNA815_25554}

Mlig455_030859 {REF} {Length: 873} {NoTransDecoderORF} {RNA1509_18737} {RNA1310_41455} {RNA815_25554}
13. MligTC455_49725 159 3.32 Mlig455_042718

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_042718 {REF} {Length: 1955} {TRANSSPLICED} {RNA1509_57632} {RNA1310_6900, RNA1509_57632} {RNA1509_57632, RNA815_8335}
14. MligTC455_49726 80 1.66 Mlig455_042820

Neo: -

Age: -

 0.956 - - 0.956 - - - Mlig455_042820 {REF} {Length: 1788} {TRANSSPLICED} {RNA1509_57632} {RNA1310_6900} {RNA815_8335}
15. MligTC455_53025 243 5.06 Mlig455_017172, Mlig455_048121

Neo: -

Age: -

Region-enriched R8: 3.427/0.00445

 BARHL2 0.952 - - 0.952 - - -

Mlig455_017172 {REF} {Length: 2016} {Pfam: Homeodomain [PF00046.31, score=76.6]} {Human: ENSG00000143032, BARHL2, BarH like homeobox 2, [RH, Score=168, Expect=4e-48]; ENSG00000125492, BARHL1, BarH like homeobox 1, [RH, Score=161, Expect=3e-46]} {Mouse: ENSMUSG00000034384, Barhl2, BarH like homeobox 2, [RH, Score=167, Expect=4e-48]; ENSMUSG00000026805, Barhl1, BarH like homeobox 1, [RH, Score=161, Expect=3e-46]} {Dmel: FBgn0011758, B-H1, BarH1, [RH, Score=150, Expect=2e-40]} {Celegans: WBGene00000452, ceh-31, Homeobox protein ceh-31, [RH, Score=154, Expect=1e-44]} {Smed: dd_Smed_v6_16007_0_1, dd_Smed_v6_16007_0_1, [RH, Score=201, Expect=1e-62]} {RNA1509_57938} {RNA1310_8308.1} {RNA815_22138}

Mlig455_048121 {REF} {Length: 2000} {Pfam: Homeodomain [PF00046.31, score=75.3]} {Human: ENSG00000143032, BARHL2, BarH like homeobox 2, [RH, Score=168, Expect=5e-47]; ENSG00000125492, BARHL1, BarH like homeobox 1, [RH, Score=162, Expect=3e-45]} {Mouse: ENSMUSG00000034384, Barhl2, BarH like homeobox 2, [RH, Score=167, Expect=6e-47]; ENSMUSG00000026805, Barhl1, BarH like homeobox 1, [RH, Score=161, Expect=4e-45]} {Dmel: FBgn0011758, B-H1, BarH1, [RH, Score=151, Expect=8e-40]} {Celegans: WBGene00000452, ceh-31, Homeobox protein ceh-31, [RH, Score=155, Expect=5e-44]} {Smed: dd_Smed_v6_16007_0_1, dd_Smed_v6_16007_0_1, [RH, Score=202, Expect=8e-62]} {RNA1509_57938} {RNA1310_8308.1} {RNA815_22138}

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