TomoSeq data search

Data search

Results for MligTC455_31335

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_31335	415	8.65	Mlig455_068046	Neo: - Age: -	POLM	Mlig455_068046 {REF} {Length: 7697} {Pfam: DNA polymerase beta thumb [PF14791.8, score=75.4]; hAT family C-terminal dimerisation region [PF05699.16, score=30.7]; Amiloride-sensitive sodium channel [PF00858.26, score=29.6]; Fingers domain of DNA polymerase lambda [PF10391.11, score=24.9]; DNA polymerase beta palm [PF14792.8, score=23.6]} {Human: ENSG00000122678, POLM, DNA polymerase mu, [Score=216, Expect=2e-60]} {Mouse: ENSMUSG00000020474, Polm, polymerase (DNA directed), mu, [RH, Score=228, Expect=5e-65]} {RNA1509_24552} {RNA1310_8091.1} {RNA815_3041}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_31335

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.09	3.365	0.92810	1.00000
RegionR2	0.117	3.365	0.81410	1.00000
RegionR3	-0.612	3.365	0.09577	0.54365
RegionR4	-0.486	3.365	0.25696	0.55822
RegionR5	0.781	3.365	0.00500	0.03459
RegionR6	0.27	3.365	0.44607	1.00000
RegionR7	-0.459	3.365	0.43498	1.00000
RegionR8	0.298	3.365	0.64803	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.295	3.365	0.85579	1.00000
RegenerationR2	0.074	3.365	0.87017	1.00000
RegenerationR3	-0.13	3.365	0.77648	0.97395
RegenerationR4	-0.705	3.365	0.11658	0.52147
RegenerationR5	-0.91	3.365	0.01051	0.18126
RegenerationR6	-0.411	3.365	0.38976	0.72987
RegenerationBL	0.625	3.365	0.30265	0.66626
RegenerationTP	0.644	3.365	0.30722	0.75205

Genes with expression patterns similar to MligTC455_31335

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31335	415	8.65	Mlig455_068046	Neo: - Age: -	POLM	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_068046 {REF} {Length: 7697} {Pfam: DNA polymerase beta thumb [PF14791.8, score=75.4]; hAT family C-terminal dimerisation region [PF05699.16, score=30.7]; Amiloride-sensitive sodium channel [PF00858.26, score=29.6]; Fingers domain of DNA polymerase lambda [PF10391.11, score=24.9]; DNA polymerase beta palm [PF14792.8, score=23.6]} {Human: ENSG00000122678, POLM, DNA polymerase mu, [Score=216, Expect=2e-60]} {Mouse: ENSMUSG00000020474, Polm, polymerase (DNA directed), mu, [RH, Score=228, Expect=5e-65]} {RNA1509_24552} {RNA1310_8091.1} {RNA815_3041}
2.	MligTC455_31339	445	9.27	Mlig455_006071, Mlig455_053223	Neo: - Age: -	NYNRIN, POLM	4.745	0.997	0.993	0.952	-	0.844	0.959	Mlig455_006071 {REF} {Length: 7416} {Pfam: DNA polymerase beta thumb [PF14791.8, score=75.5]; Integrase zinc binding domain [PF17921.3, score=59.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.0]; Integrase core domain [PF00665.28, score=45.1]; Fingers domain of DNA polymerase lambda [PF10391.11, score=24.2]; DNA polymerase beta palm [PF14792.8, score=20.8]} {Human: ENSG00000122678, POLM, DNA polymerase mu, [Score=214, Expect=3e-59]} {Mouse: ENSMUSG00000020474, Polm, polymerase (DNA directed), mu, [RH, Score=229, Expect=2e-64]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=127, Expect=2e-29]} {RNA1509_18343} {RNA1310_8091.1} {RNA815_3041} Mlig455_053223 {REF} {Length: 2426} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.1]; Integrase core domain [PF00665.28, score=46.3]; Integrase core domain [PF13683.8, score=18.4]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.9, Expect=6e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=94.0, Expect=4e-19]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=118, Expect=4e-27]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}
3.	MligTC455_45371	7002	145.88	Mlig455_028153, Mlig455_028223	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.251		1.797	-	-	-	-	0.964	0.833	Mlig455_028153 {REF} {Length: 1667} {Pfam: Universal stress protein family [PF00582.28, score=89.4]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=96.3, Expect=7e-26]} {RNA1509_4233} {RNA1310_22581} {RNA815_24567} Mlig455_028223 {REF} {Length: 1837} {Pfam: Universal stress protein family [PF00582.28, score=89.4]} {Smed: dd_Smed_v6_402_1_1, dd_Smed_v6_402_1_1, [Score=96.3, Expect=7e-26]} {RNA1509_33340, RNA1509_4233, RNA1509_6314} {RNA1310_22581, RNA1509_33340, RNA1509_4233, RNA1509_6314} {RNA1509_33340, RNA1509_4233, RNA1509_6314, RNA815_24567}
4.	MligTC455_08309	157	3.27	Mlig455_026925	Neo: - Age: -		1.722	-	-	0.769	-	-	0.953	Mlig455_026925 {REF} {Length: 3129} {TRANSSPLICED} {RNA1509_28914} {RNA1310_5574.1} {RNA815_9311}
5.	MligTC455_07316	373	7.77	Mlig455_000488	Neo: Irradiation Age: Down-Up-Down	SIN3A	1.717	0.767	-	-	-	-	0.950	Mlig455_000488 {REF} {Length: 4419} {TRANSSPLICED} {Pfam: C-terminal domain of Sin3a protein [PF16879.7, score=95.9]; Paired amphipathic helix repeat [PF02671.23, score=90.8]; Sin3 family co-repressor [PF08295.14, score=90.8]} {Human: ENSG00000169375, SIN3A, SIN3 transcription regulator family member A, [Score=299, Expect=2e-83]} {Mouse: ENSMUSG00000042557, Sin3a, transcriptional regulator, SIN3A (yeast), [Score=338, Expect=5e-97]} {Dmel: FBgn0022764, Sin3A, [Score=250, Expect=3e-67]} {Celegans: WBGene00004117, sin-3, Paired amphipathic helix protein sin-3, [Score=110, Expect=5e-24]} {Smed: dd_Smed_v6_7034_0_1, dd_Smed_v6_7034_0_1, [Score=211, Expect=2e-55]} {RNA1509_41252, RNA1509_4899} {RNA1310_4266.2, RNA1509_41252, RNA1509_4899} {RNA1509_41252, RNA1509_4899, RNA815_1997}
6.	MligTC455_44119	177	3.68	Mlig455_002837	Neo: Irradiation Age: - Region-enriched R4: 2.820/0.01591 Region-enriched R5: 2.674/0.02121	TENT2	1.713	-	-	0.757	-	-	0.956	Mlig455_002837 {REF} {Length: 1389} {TRANSSPLICED} {Pfam: Cid1 family poly A polymerase [PF03828.21, score=40.5]; TUTase nucleotidyltransferase domain [PF19088.2, score=35.2]} {Human: ENSG00000164329, TENT2, terminal nucleotidyltransferase 2, [Score=136, Expect=4e-37]} {Mouse: ENSMUSG00000042167, Tent2, terminal nucleotidyltransferase 2, [Score=133, Expect=5e-36]} {Dmel: FBgn0260780, wisp, wispy, [Score=150, Expect=3e-41]} {Celegans: WBGene00009284, F31C3.2, [Score=129, Expect=6e-34]} {Smed: dd_Smed_v6_28587_0_1, dd_Smed_v6_28587_0_1, [Score=237, Expect=4e-72]} {RNA1509_5760} {RNA1310_11641} {RNA815_6053}
7.	MligTC455_32802	82	1.71	Mlig455_058732	Neo: Int S/G2/M Age: -	CLEC16A	0.983	-	-	-	-	-	0.983	Mlig455_058732 {REF} {Length: 5696} {TRANSSPLICED} {Pfam: CLEC16A C-terminal [PF19439.1, score=338.2]; Uncharacterised conserved protein [PF09758.11, score=191.5]} {Human: ENSG00000038532, CLEC16A, C-type lectin domain containing 16A, [RH, Score=746, Expect=0.0]} {Mouse: ENSMUSG00000068663, Clec16a, C-type lectin domain family 16, member A, [RH, Score=741, Expect=0.0]} {Dmel: FBgn0038427, ema, endosomal maturation defective, [RH, Score=692, Expect=0.0]} {Celegans: WBGene00001660, gop-1, Protein CLEC16A homolog, [RH, Score=310, Expect=4e-89]} {Smed: dd_Smed_v6_3621_0_1, dd_Smed_v6_3621_0_1, [RH, Score=652, Expect=0.0]} {RNA1509_19027} {RNA1310_5561.1} {RNA815_6181}
8.	MligTC455_28450	246	5.13	Mlig455_041204	Neo: - Age: -		0.974	-	-	-	-	-	0.974	Mlig455_041204 {REF} {Length: 1413} {Pfam: Transcriptional Coactivator p15 (PC4) [PF02229.18, score=24.4]} {RNA1509_37153} {RNA1310_17647} {RNA815_17449}
9.	MligTC455_52462	166	3.45	Mlig455_005943	Neo: - Age: Up-Down-Up, logFC(26M/2M)=4.076 Regeneration-upregulated R2: 5.759 Regeneration-enriched R2: 5.759	AGRN	0.971	-	-	-	-	-	0.971	Mlig455_005943 {REF} {Length: 1577} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=130.4]; Kazal-type serine protease inhibitor domain [PF07648.17, score=91.6]} {Human: ENSG00000188157, AGRN, agrin, [Score=55.8, Expect=8e-08]} {Mouse: ENSMUSG00000041936, Agrn, agrin, [Score=56.2, Expect=4e-08]} {Dmel: FBgn0052354, CG32354, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_3649_0_1, dd_Smed_v6_3649_0_1, [Score=51.6, Expect=5e-07]} {RNA1509_43736} {RNA1310_19594} {RNA815_11515}
10.	MligTC455_37590	447	9.32	Mlig455_054285	Neo: - Age: -		0.97	-	-	-	-	-	0.970	Mlig455_054285 {REF} {Length: 1530} {RNA1509_10638, RNA1509_22470} {RNA1310_31041, RNA1509_22470} {RNA1509_22470, RNA815_36527}
11.	MligTC455_50576	526	10.95	Mlig455_036753	Neo: - Age: - Region-enriched R5: 1.140/0.01947		0.968	-	-	-	-	-	0.968	Mlig455_036753 {REF} {Length: 2233} {TRANSSPLICED} {RNA1509_41506, RNA1509_55208, RNA1509_56692} {RNA1310_18042, RNA1509_41506, RNA1509_55208, RNA1509_56692} {RNA1509_41506, RNA1509_55208, RNA1509_56692, RNA815_17149}
12.	MligTC455_21350	184	3.83	Mlig455_064601	Neo: - Age: Down-Down-Up	PIR	0.966	-	-	-	-	-	0.966	Mlig455_064601 {REF} {Length: 1684} {TRANSSPLICED} {Pfam: Pirin [PF02678.18, score=114.3]; Pirin C-terminal cupin domain [PF05726.15, score=96.8]; Cupin domain [PF07883.13, score=28.2]} {Human: ENSG00000087842, PIR, pirin, [RH, Score=318, Expect=1e-108]} {Mouse: ENSMUSG00000031379, Pir, pirin, [RH, Score=310, Expect=1e-105]} {RNA1509_26991, RNA1509_39833} {RNA1310_25739, RNA1509_39833} {RNA1509_39833, RNA815_15910}
13.	MligTC455_23620	579	12.06	Mlig455_015298	Neo: - Age: Up-Down-Down	SFMBT2	0.963	-	-	-	-	-	0.963	Mlig455_015298 {REF} {Length: 5445} {Pfam: mbt repeat [PF02820.20, score=112.7]; SLED domain [PF12140.10, score=85.5]} {Human: ENSG00000198879, SFMBT2, Scm like with four mbt domains 2, [RH, Score=313, Expect=1e-91]} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [RH, Score=268, Expect=2e-75]} {Dmel: FBgn0032475, Sfmbt, Scm-related gene containing four mbt domains, [Score=81.6, Expect=2e-15]} {Smed: dd_Smed_v6_4835_0_1, dd_Smed_v6_4835_0_1, [Score=203, Expect=4e-54]} {RNA1509_11523} {RNA1310_4982.2, RNA1509_11523} {RNA1509_11523, RNA815_1974}
14.	Mlig999008.1						0.962	-	-	-	-	-	0.962
15.	MligTC455_03722	610	12.71	Mlig455_021378	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.431	POU6F2	0.96	-	-	-	-	-	0.960	Mlig455_021378 {REF} {Length: 3493} {Pfam: Pou domain - N-terminal to homeobox domain [PF00157.19, score=101.1]; Uncharacterized conserved domain (SAYSvFN) [PF10260.11, score=75.9]; Homeodomain [PF00046.31, score=59.3]} {Human: ENSG00000106536, POU6F2, POU class 6 homeobox 2, [RH, Score=247, Expect=1e-71]} {Mouse: ENSMUSG00000009734, Pou6f2, POU domain, class 6, transcription factor 2, [RH, Score=247, Expect=3e-72]} {Dmel: FBgn0261588, pdm3, pou domain motif 3, [RH, Score=243, Expect=2e-67]} {Celegans: WBGene00000441, ceh-18, Homeobox protein ceh-18, [Score=123, Expect=2e-29]} {Smed: dd_Smed_v6_13010_0_1, dd_Smed_v6_13010_0_1, [RH, Score=231, Expect=2e-67]} {RNA1509_23034} {RNA1310_7430} {RNA815_11647}
16.	MligTC455_17896	109	2.28	Mlig455_025370	Neo: - Age: logFC(26M/2M)=-1.625		0.96	-	-	-	-	-	0.960	Mlig455_025370 {REF} {Length: 4898} {RNA1509_32517} {RNA1310_3990.1} {RNA815_18494}
17.	MligTC455_09728	218	4.54	Mlig455_059814	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_059814 {REF} {Length: 769} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=25.4]; C2H2-type zinc finger [PF13894.8, score=20.1]; Ubiquitin-Binding Zinc Finger [PF18439.3, score=18.2]}
18.	MligTC455_17078	514	10.7	Mlig455_019915	Neo: Irradiation Age: Up-Up-Down		0.959	-	-	-	-	-	0.959	Mlig455_019915 {REF} {Length: 2817} {RNA1509_29099} {RNA1310_24554} {RNA815_5067.1}
19.	MligTC455_52735	2825	58.84	Mlig455_030990, Mlig455_069436	Neo: Neoblast Age: logFC(26M/2M)=0.244	DNPH1	0.959	-	-	-	-	-	0.959	Mlig455_030990 {REF} {Length: 1330} {TRANSSPLICED} {Pfam: Nucleoside 2-deoxyribosyltransferase [PF05014.17, score=50.0]} {Human: ENSG00000112667, DNPH1, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, [RH, Score=108, Expect=5e-30]} {Mouse: ENSMUSG00000040658, Dnph1, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, [RH, Score=107, Expect=1e-29]} {RNA1509_22558, RNA1509_23055, RNA1509_29010, RNA1509_8975} {RNA1310_54438.1, RNA1509_22558, RNA1509_23055, RNA1509_29010, RNA1509_8975} {RNA1509_22558, RNA1509_23055, RNA1509_29010, RNA1509_8975, RNA815_11756.1} Mlig455_069436 {REF} {Length: 1331} {TRANSSPLICED} {Pfam: Nucleoside 2-deoxyribosyltransferase [PF05014.17, score=52.0]} {Human: ENSG00000112667, DNPH1, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, [RH, Score=109, Expect=2e-30]} {Mouse: ENSMUSG00000040658, Dnph1, 2'-deoxynucleoside 5'-phosphate N-hydrolase 1, [RH, Score=108, Expect=3e-30]} {RNA1509_14859} {RNA1310_54438.1, RNA1509_14859} {RNA1509_14859, RNA815_11756.1}
20.	MligTC455_47506	2016	42	Mlig455_022609, Mlig455_063634	Neo: - Age: - Region-enriched R4: 1.114/0.00086		0.958	-	-	-	-	-	0.958	Mlig455_022609 {REF} {Length: 1920} {TRANSSPLICED} {Pfam: Mitochondrial and peroxisomal fission factor Mff [PF05644.13, score=85.8]} {RNA1509_24447} {RNA1310_29887} {RNA815_20947} Mlig455_063634 {REF} {Length: 1609} {TRANSSPLICED} {Pfam: Mitochondrial and peroxisomal fission factor Mff [PF05644.13, score=67.6]} {RNA1509_24447} {RNA1310_53535, RNA1509_24447} {RNA1509_24447, RNA815_33306}
21.	MligTC455_53814	76	1.59	Mlig455_013605	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_013605 {REF} {Length: 467} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_77656}
22.	MligTC455_10652	112	2.34	Mlig455_054198	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_054198 {REF} {Length: 407} {NoTransDecoderORF}
23.	MligTC455_47641	250	5.21	Mlig455_007026, Mlig455_069139	Neo: - Age: Down-Up-Up		0.95	-	-	-	-	-	0.950	Mlig455_007026 {REF} {Length: 2110} {RNA1509_55500} {RNA1310_26431} {RNA815_24412} Mlig455_069139 {REF} {Length: 2221} {RNA1509_55500} {RNA1310_26431, RNA1509_55500} {RNA1509_55500, RNA815_24412}