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Results for MligTC455_17134

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_17134 342 7.13 Mlig455_058833

Neo: -

Age: -

 USH1C Mlig455_058833 {REF} {Length: 3523} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=68.2]; PDZ domain [PF17820.3, score=59.5]; PDZ domain [PF13180.8, score=40.4]} {Human: ENSG00000006611, USH1C, USH1 protein network component harmonin, [RH, Score=192, Expect=3e-55]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [RH, Score=183, Expect=4e-52]} {Dmel: FBgn0029835, CG5921, [RH, Score=119, Expect=8e-29]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [Score=63.2, Expect=9e-11]} {RNA1509_13384, RNA1509_51500} {RNA1310_14486, RNA1509_13384, RNA1509_51500} {RNA1509_13384, RNA1509_51500, RNA815_2001}

Cumulative graph for MligTC455_17134

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.497 3.188 0.18282 0.81250
RegionR2 0.704 3.188 0.23768 0.61162
RegionR3 -0.674 3.188 0.11953 0.59796
RegionR4 -0.527 3.188 0.39629 0.72283
RegionR5 -1.624 3.188 0.00010 0.00169
RegionR6 -0.627 3.188 0.17064 0.72761
RegionR7 0.159 3.188 0.78922 1.00000
RegionR8 1.092 3.188 0.08707 0.55797

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -6.554 3.188 0.14012 0.87672
RegenerationR2 -0.296 3.188 0.53674 0.88681
RegenerationR3 0.106 3.188 0.85005 0.99833
RegenerationR4 -0.491 3.188 0.41422 0.82276
RegenerationR5 -0.1 3.188 0.85657 1.00000
RegenerationR6 -0.472 3.188 0.46001 0.77775
RegenerationBL -0.078 3.188 0.92404 1.00000
RegenerationTP -1.457 3.188 0.06359 0.40835


Genes with expression patterns similar to MligTC455_17134

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_17134 342 7.13 Mlig455_058833

Neo: -

Age: -

 USH1C 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_058833 {REF} {Length: 3523} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=68.2]; PDZ domain [PF17820.3, score=59.5]; PDZ domain [PF13180.8, score=40.4]} {Human: ENSG00000006611, USH1C, USH1 protein network component harmonin, [RH, Score=192, Expect=3e-55]} {Mouse: ENSMUSG00000030838, Ush1c, USH1 protein network component harmonin, [RH, Score=183, Expect=4e-52]} {Dmel: FBgn0029835, CG5921, [RH, Score=119, Expect=8e-29]} {Smed: dd_Smed_v6_11951_0_1, dd_Smed_v6_11951_0_1, [Score=63.2, Expect=9e-11]} {RNA1509_13384, RNA1509_51500} {RNA1310_14486, RNA1509_13384, RNA1509_51500} {RNA1509_13384, RNA1509_51500, RNA815_2001}
2. MligTC455_25070 294 6.12 Mlig455_003268, Mlig455_062829

Neo: -

Age: -

 DDX11 0.96 - - 0.960 - - -

Mlig455_003268 {REF} {Length: 4699} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=175.6]; Ku70/Ku80 beta-barrel domain [PF02735.18, score=161.6]; DEAD_2 [PF06733.17, score=132.8]; Ku70/Ku80 N-terminal alpha/beta domain [PF03731.17, score=87.0]; Ku70/Ku80 C-terminal arm [PF03730.16, score=25.3]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [RH, Score=459, Expect=4e-143]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=475, Expect=4e-149]} {Dmel: FBgn0026876, CG11403, [RH, Score=250, Expect=5e-69]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=377, Expect=6e-114]} {Smed: dd_Smed_v6_19858_0_2, dd_Smed_v6_19858_0_2, [Score=365, Expect=1e-109]} {RNA1509_4805} {RNA1310_12398.1} {RNA815_4398}

Mlig455_062829 {REF} {Length: 4704} {TRANSSPLICED} {Pfam: Helicase C-terminal domain [PF13307.8, score=176.2]; Ku70/Ku80 beta-barrel domain [PF02735.18, score=161.6]; DEAD_2 [PF06733.17, score=133.8]; Ku70/Ku80 N-terminal alpha/beta domain [PF03731.17, score=87.0]; Ku70/Ku80 C-terminal arm [PF03730.16, score=29.3]} {Human: ENSG00000013573, DDX11, DEAD/H-box helicase 11, [RH, Score=456, Expect=2e-142]} {Mouse: ENSMUSG00000035842, Ddx11, DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11, [Score=474, Expect=9e-149]} {Dmel: FBgn0026876, CG11403, [RH, Score=252, Expect=1e-69]} {Celegans: WBGene00010839, chl-1, ATP-dependent DNA helicase chl-1, [Score=372, Expect=3e-112]} {Smed: dd_Smed_v6_19858_0_2, dd_Smed_v6_19858_0_2, [Score=367, Expect=2e-110]} {RNA1509_4805} {RNA1310_12398.1} {RNA815_4398}
3. MligTC455_49637 487 10.15 Mlig455_056339

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.302

 WDR88 0.954 - - - - 0.954 - Mlig455_056339 {REF} {Length: 1335} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=99.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=24.8]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=21.8]} {Human: ENSG00000166359, WDR88, WD repeat domain 88, [RH, Score=244, Expect=6e-76]} {Mouse: ENSMUSG00000106911, Snrnp40, small nuclear ribonucleoprotein 40 (U5), [Score=122, Expect=5e-31]; ENSMUSG00000074088, Snrnp40, small nuclear ribonucleoprotein 40 (U5), [Score=122, Expect=5e-31]} {Dmel: FBgn0015754, Lis-1, Lissencephaly-1, [Score=89.7, Expect=2e-19]} {Celegans: WBGene00010572, wdr-5.2, WD repeat-containing protein wdr-5.2, [Score=84.3, Expect=1e-17]} {Smed: dd_Smed_v6_12057_0_2, dd_Smed_v6_12057_0_2, [RH, Score=291, Expect=1e-95]} {RNA1509_14225} {RNA1310_25278, RNA1509_14225} {RNA1509_14225, RNA815_11177}
4. MligTC455_52867 21 0.44 Mlig455_042843

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_042843 {REF} {Length: 1767} {NoTransDecoderORF} {RNA1509_35052} {RNA1310_43347} {RNA815_31290}

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