TomoSeq data search

Data search

Results for MligTC455_17222

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17222

3351

69.82

Mlig455_014000

Neo: -

Age: -

MLEC

Mlig455_014000 {REF} {Length: 1634} {Pfam: Malectin domain [PF11721.10, score=42.4]} {Human: ENSG00000110917, MLEC, malectin, [Score=112, Expect=3e-30]} {Mouse: ENSMUSG00000048578, Mlec, malectin, [Score=112, Expect=4e-30]} {Dmel: FBgn0032916, CG9257, [Score=123, Expect=5e-34]} {Celegans: WBGene00018423, F44E2.10, [Score=67.0, Expect=2e-13]} {Smed: dd_Smed_v6_1880_0_1, dd_Smed_v6_1880_0_1, [Score=168, Expect=5e-52]} {RNA1509_9667} {RNA1310_12277.1} {RNA815_4603.1}

Cumulative graph for MligTC455_17222

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.584	6.176	0.25340	0.90072
RegionR2	-0.426	6.176	0.11319	0.41585
RegionR3	0.028	6.176	0.89783	1.00000
RegionR4	0.664	6.176	0.00547	0.03899
RegionR5	0.757	6.176	0.00009	0.00155
RegionR6	0.042	6.176	0.85150	1.00000
RegionR7	-0.038	6.176	0.88603	1.00000
RegionR8	-0.442	6.176	0.18703	0.77571

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.419	6.176	0.56785	1.00000
RegenerationR2	0.181	6.176	0.46685	0.85629
RegenerationR3	0.207	6.176	0.42618	0.81903
RegenerationR4	-0.028	6.176	0.91264	1.00000
RegenerationR5	-0.066	6.176	0.78184	0.98221
RegenerationR6	0.64	6.176	0.01270	0.13900
RegenerationBL	0.849	6.176	0.00094	0.02198
RegenerationTP	0.048	6.176	0.87783	1.00000

Genes with expression patterns similar to MligTC455_17222

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17222	3351	69.82	Mlig455_014000	Neo: - Age: -	MLEC	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_014000 {REF} {Length: 1634} {Pfam: Malectin domain [PF11721.10, score=42.4]} {Human: ENSG00000110917, MLEC, malectin, [Score=112, Expect=3e-30]} {Mouse: ENSMUSG00000048578, Mlec, malectin, [Score=112, Expect=4e-30]} {Dmel: FBgn0032916, CG9257, [Score=123, Expect=5e-34]} {Celegans: WBGene00018423, F44E2.10, [Score=67.0, Expect=2e-13]} {Smed: dd_Smed_v6_1880_0_1, dd_Smed_v6_1880_0_1, [Score=168, Expect=5e-52]} {RNA1509_9667} {RNA1310_12277.1} {RNA815_4603.1}
2.	MligTC455_34934	410	8.53	Mlig455_031664	Neo: - Age: -	MFSD12	0.966	-	-	-	-	0.966	-	Mlig455_031664 {REF} {Length: 4393} {TRANSSPLICED} {Pfam: MFS/sugar transport protein [PF13347.8, score=71.4]; Major Facilitator Superfamily [PF07690.18, score=61.4]} {Human: ENSG00000161091, MFSD12, major facilitator superfamily domain containing 12, [RH, Score=312, Expect=6e-101]} {Mouse: ENSMUSG00000034854, Mfsd12, major facilitator superfamily domain containing 12, [RH, Score=301, Expect=1e-96]} {Celegans: WBGene00017530, F16H11.1, [RH, Score=294, Expect=7e-94]} {Smed: dd_Smed_v6_7077_0_1, dd_Smed_v6_7077_0_1, [RH, Score=315, Expect=3e-102]} {RNA1509_35303} {RNA1310_17953} {RNA815_7362.1}
3.	MligTC455_34935	417	8.69	Mlig455_031682	Neo: - Age: -	MFSD12	0.956	-	-	-	-	0.956	-	Mlig455_031682 {REF} {Length: 4216} {TRANSSPLICED} {Pfam: MFS/sugar transport protein [PF13347.8, score=69.1]; Major Facilitator Superfamily [PF07690.18, score=60.4]} {Human: ENSG00000161091, MFSD12, major facilitator superfamily domain containing 12, [RH, Score=310, Expect=3e-100]} {Mouse: ENSMUSG00000034854, Mfsd12, major facilitator superfamily domain containing 12, [RH, Score=306, Expect=1e-98]} {Celegans: WBGene00017530, F16H11.1, [RH, Score=291, Expect=9e-93]} {Smed: dd_Smed_v6_7077_0_1, dd_Smed_v6_7077_0_1, [RH, Score=310, Expect=2e-100]} {RNA1509_35303, RNA1509_39794} {RNA1310_17953, RNA1509_35303, RNA1509_39794} {RNA1509_35303, RNA1509_39794, RNA815_7362.1}
4.	MligTC455_21301	2418	50.37	Mlig455_055218, Mlig455_055312	Neo: - Age: - Regeneration-enriched BL: 2.253 Regeneration-enriched R6: 1.725	HNRNPR, SYNCRIP	0.954	-	-	-	-	-	0.954	Mlig455_055218 {REF} {Length: 3254} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=142.8]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=23.6]; RNA recognition motif [PF16367.7, score=22.7]} {Human: ENSG00000135316, SYNCRIP, synaptotagmin binding cytoplasmic RNA interacting protein, [RH, Score=373, Expect=7e-120]; ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=1e-112]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=357, Expect=1e-112]} {Mouse: ENSMUSG00000032423, Syncrip, synaptotagmin binding, cytoplasmic RNA interacting protein, [RH, Score=372, Expect=1e-119]; ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=358, Expect=4e-113]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=404, Expect=4e-130]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=315, Expect=3e-97]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=258, Expect=1e-75]} {RNA1509_41895, RNA1509_4811} {RNA1310_12864, RNA1509_4811} {RNA1509_4811, RNA815_4749.1} Mlig455_055312 {REF} {Length: 3347} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=144.4]; Heterogeneous nuclear ribonucleoprotein Q acidic domain [PF18360.3, score=39.7]; Occluded RNA-recognition motif [PF16842.7, score=23.5]; RNA recognition motif [PF16367.7, score=21.9]} {Human: ENSG00000282958, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=355, Expect=6e-112]; ENSG00000125944, HNRNPR, heterogeneous nuclear ribonucleoprotein R, [RH, Score=355, Expect=6e-112]} {Mouse: ENSMUSG00000066037, Hnrnpr, heterogeneous nuclear ribonucleoprotein R, [RH, Score=356, Expect=2e-112]} {Dmel: FBgn0038826, Syp, Syncrip, [RH, Score=405, Expect=2e-130]} {Celegans: WBGene00002000, hrp-2, HnRNP A1 homolog, [RH, Score=315, Expect=2e-97]} {Smed: dd_Smed_v6_2228_0_1, dd_Smed_v6_2228_0_1, [Score=256, Expect=8e-75]} {RNA1509_41895} {RNA1310_12864} {RNA815_4749.1}

Berezikov Lab - 2020-2021 © ERIBA