Data search
Results for MligTC455_17287
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17287 | 26 | 0.54 | Mlig455_069741 | Neo: - Age: - |
Mlig455_069741 {REF} {Length: 1499} {RNA1509_25219} {RNA1310_39523} |
Cumulative graph for MligTC455_17287
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.791 | 1.01 | 1.00000 | 1.00000 | |
| RegionR2 | 0.576 | 1.01 | 0.52199 | 0.89601 | |
| RegionR3 | -0.694 | 1.01 | 0.99963 | 1.00000 | |
| RegionR4 | 2.909 | 1.01 | 0.03666 | 0.15640 | |
| RegionR5 | 1.669 | 1.01 | 0.26591 | 0.58907 | |
| RegionR6 | 1.349 | 1.01 | 0.32620 | 0.91400 | |
| RegionR7 | -1.678 | 1.01 | 0.99967 | 1.00000 | |
| RegionR8 | -1.339 | 1.01 | 0.99969 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.228 | 1.01 | 1.00000 | 1.00000 | |
| RegenerationR2 | 0.97 | 1.01 | 0.36537 | 0.79246 | |
| RegenerationR3 | 2.149 | 1.01 | 0.14903 | 0.57803 | |
| RegenerationR4 | 0.138 | 1.01 | 0.94010 | 1.00000 | |
| RegenerationR5 | -0.361 | 1.01 | 0.88778 | 1.00000 | |
| RegenerationR6 | -0.701 | 1.01 | 0.69701 | 0.92283 | |
| RegenerationBL | 1.62 | 1.01 | 0.43175 | 0.79965 | |
| RegenerationTP | 3.34 | 1.01 | 0.23208 | 0.67729 |
Genes with expression patterns similar to MligTC455_17287
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17287 | 26 | 0.54 | Mlig455_069741 | Neo: - Age: - |
4 | - | - | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_069741 {REF} {Length: 1499} {RNA1509_25219} {RNA1310_39523} | |
| 2. | MligTC455_52536 | 125 | 2.6 | Mlig455_023717 | Neo: Irradiation Age: logFC(26M/2M)=0.257 Region-enriched R5: 3.018/0.03050 |
HDAC8 | 0.977 | - | - | - | 0.977 | - | - | Mlig455_023717 {REF} {Length: 4082} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=249.8]; Histone deacetylase domain [PF00850.21, score=244.5]; OB-fold nucleic acid binding domain [PF01336.27, score=35.0]} {Human: ENSG00000147099, HDAC8, histone deacetylase 8, [RH, Score=347, Expect=2e-111]; ENSG00000285547, AL133500.1, novel protein, [RH, Score=346, Expect=1e-108]} {Mouse: ENSMUSG00000067567, Hdac8, histone deacetylase 8, [RH, Score=350, Expect=1e-112]} {Dmel: FBgn0025825, HDAC3, Histone deacetylase 3, [Score=296, Expect=1e-91]} {Celegans: WBGene00001834, hda-1, Histone deacetylase 1, [Score=297, Expect=9e-92]} {Smed: dd_Smed_v6_695_0_1, dd_Smed_v6_695_0_1, [Score=304, Expect=2e-94]} {RNA1509_32166} {RNA1310_10827} {RNA815_11427} |
| 3. | MligTC455_22475 | 51 | 1.06 | Mlig455_039108, Mlig455_041684, Mlig455_041762 | Neo: Germline Age: - Region-enriched R4: 3.427/0.04994 Regeneration-upregulated R2: 6.065 Regeneration-enriched R2: 6.065 |
0.973 | - | - | - | - | - | 0.973 | Mlig455_039108 {REF} {Length: 920} {RNA1509_45173} {RNA1310_56841} {RNA815_31799} Mlig455_041684 {REF} {Length: 293} {NoTransDecoderORF} {RNA1509_45173} {RNA1310_6693.1} {RNA815_19575} Mlig455_041762 {REF} {Length: 239} {NoTransDecoderORF} {RNA1509_45173} {RNA1310_6693.1} {RNA815_19575} |
|
| 4. | MligTC455_19929 | 66 | 1.37 | Mlig455_019374 | Neo: Int S/G2/M Age: - |
0.963 | - | - | - | - | - | 0.963 | Mlig455_019374 {REF} {Length: 1484} {TRANSSPLICED} {Pfam: Elongation complex protein 6 [PF09807.11, score=20.9]} {RNA1509_17561} {RNA1310_2795.1} {RNA815_13493} | |
| 5. | MligTC455_25235 | 235 | 4.9 | Mlig455_020884 | Neo: - Age: Up-Down-Down Region-enriched R2: 2.589/0.01009 |
KY | 0.959 | - | - | - | 0.959 | - | - | Mlig455_020884 {REF} {Length: 8578} {TRANSSPLICED} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=103, Expect=1e-21]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=105, Expect=3e-22]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=203, Expect=3e-53]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=177, Expect=4e-47]} {Smed: dd_Smed_v6_5330_0_1, dd_Smed_v6_5330_0_1, [RH, Score=565, Expect=2e-169]} {RNA1509_20929, RNA1509_37590, RNA1509_40482, RNA1509_56896, RNA1509_9599} {RNA1310_253, RNA1509_20929, RNA1509_37590, RNA1509_40482, RNA1509_56896, RNA1509_9599} {RNA1509_20929, RNA1509_37590, RNA1509_40482, RNA1509_56896, RNA1509_9599, RNA815_228} |
| 6. | MligTC455_33252 | 49 | 1.02 | Mlig455_054730, Mlig455_064006 | Neo: - Age: logFC(26M/2M)=0.640 Region-enriched R4: 4.709/0.00319 |
VCAN | 0.957 | - | - | 0.957 | - | - | - | Mlig455_054730 {REF} {Length: 4749} {Pfam: Lectin C-type domain [PF00059.23, score=72.5]; Cornifin (SPRR) family [PF02389.17, score=26.1]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=21.3]} {Human: ENSG00000038427, VCAN, versican, [Score=54.3, Expect=6e-07]; ENSG00000185499, MUC1, mucin 1, cell surface associated, [Score=53.1, Expect=1e-06]} {Mouse: ENSMUSG00000021614, Vcan, versican, [Score=54.3, Expect=4e-07]} {Celegans: WBGene00020191, clec-53, C-type LECtin, [Score=65.9, Expect=2e-11]} {RNA1509_22651} {RNA1310_622.1} {RNA815_2514.1} Mlig455_064006 {REF} {Length: 3175} {Pfam: Lectin C-type domain [PF00059.23, score=70.8]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=21.6]} {Human: ENSG00000038427, VCAN, versican, [Score=51.6, Expect=3e-06]; ENSG00000152672, CLEC4F, C-type lectin domain family 4 member F, [Score=51.2, Expect=3e-06]} {Mouse: ENSMUSG00000021614, Vcan, versican, [Score=51.6, Expect=2e-06]} {Celegans: WBGene00020191, clec-53, C-type LECtin, [Score=63.9, Expect=5e-11]} {Smed: dd_Smed_v6_1489_0_1, dd_Smed_v6_1489_0_1, [Score=48.1, Expect=6e-06]} {RNA1509_2975} {RNA1310_16046.1} {RNA815_4830.1} |
| 7. | MligTC455_12072 | 19 | 0.39 | Mlig455_032985 | Neo: - Age: - |
0.953 | - | - | - | - | 0.953 | - | Mlig455_032985 {REF} {Length: 1288} {NoTransDecoderORF} |