Data search
Results for MligTC455_52536
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52536 | 125 | 2.60 | Mlig455_023717 | Neo: Irradiation Age: logFC(26M/2M)=0.257 Region-enriched R5: 3.018/0.03050 |
HDAC8 | Mlig455_023717 {REF} {Length: 4082} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=249.8]; Histone deacetylase domain [PF00850.21, score=244.5]; OB-fold nucleic acid binding domain [PF01336.27, score=35.0]} {Human: ENSG00000147099, HDAC8, histone deacetylase 8, [RH, Score=347, Expect=2e-111]; ENSG00000285547, AL133500.1, novel protein, [RH, Score=346, Expect=1e-108]} {Mouse: ENSMUSG00000067567, Hdac8, histone deacetylase 8, [RH, Score=350, Expect=1e-112]} {Dmel: FBgn0025825, HDAC3, Histone deacetylase 3, [Score=296, Expect=1e-91]} {Celegans: WBGene00001834, hda-1, Histone deacetylase 1, [Score=297, Expect=9e-92]} {Smed: dd_Smed_v6_695_0_1, dd_Smed_v6_695_0_1, [Score=304, Expect=2e-94]} {RNA1509_32166} {RNA1310_10827} {RNA815_11427} |
Cumulative graph for MligTC455_52536
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -8.689 | 2.334 | 0.99961 | 1.00000 | |
| RegionR2 | 4.324 | 2.334 | 0.00787 | 0.08664 | |
| RegionR3 | 2.994 | 2.334 | 0.01070 | 0.16066 | |
| RegionR4 | -1.061 | 2.334 | 0.93899 | 1.00000 | |
| RegionR5 | 3.018 | 2.334 | 0.00422 | 0.03050 | |
| RegionR6 | 1.989 | 2.334 | 0.11917 | 0.63000 | |
| RegionR7 | -4.858 | 2.334 | 0.99962 | 1.00000 | |
| RegionR8 | 2.283 | 2.334 | 0.13398 | 0.67008 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 5.805 | 2.334 | 0.99984 | 1.00000 | |
| RegenerationR2 | 2.543 | 2.334 | 0.01795 | 0.22034 | |
| RegenerationR3 | 2.237 | 2.334 | 0.04921 | 0.38541 | |
| RegenerationR4 | 4.147 | 2.334 | 0.00305 | 0.07301 | |
| RegenerationR5 | 2.281 | 2.334 | 0.01512 | 0.21378 | |
| RegenerationR6 | 3.026 | 2.334 | 0.01644 | 0.15833 | |
| RegenerationBL | 3.341 | 2.334 | 0.11537 | 0.40181 | |
| RegenerationTP | 0.921 | 2.334 | 0.99956 | 1.00000 |
Genes with expression patterns similar to MligTC455_52536
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52536 | 125 | 2.6 | Mlig455_023717 | Neo: Irradiation Age: logFC(26M/2M)=0.257 Region-enriched R5: 3.018/0.03050 |
HDAC8 | 4 | 1.000 | 1.000 | - | 1.000 | - | 1.000 | Mlig455_023717 {REF} {Length: 4082} {TRANSSPLICED} {Pfam: tRNA synthetases class II (D, K and N) [PF00152.22, score=249.8]; Histone deacetylase domain [PF00850.21, score=244.5]; OB-fold nucleic acid binding domain [PF01336.27, score=35.0]} {Human: ENSG00000147099, HDAC8, histone deacetylase 8, [RH, Score=347, Expect=2e-111]; ENSG00000285547, AL133500.1, novel protein, [RH, Score=346, Expect=1e-108]} {Mouse: ENSMUSG00000067567, Hdac8, histone deacetylase 8, [RH, Score=350, Expect=1e-112]} {Dmel: FBgn0025825, HDAC3, Histone deacetylase 3, [Score=296, Expect=1e-91]} {Celegans: WBGene00001834, hda-1, Histone deacetylase 1, [Score=297, Expect=9e-92]} {Smed: dd_Smed_v6_695_0_1, dd_Smed_v6_695_0_1, [Score=304, Expect=2e-94]} {RNA1509_32166} {RNA1310_10827} {RNA815_11427} |
| 2. | MligTC455_29472 | 289 | 6.03 | Mlig455_028565 | Neo: Int S/G2/M Age: - |
1.851 | 0.890 | - | - | - | - | 0.961 | Mlig455_028565 {REF} {Length: 3475} {RNA1509_15781} {RNA1310_3922} {RNA815_5825} | |
| 3. | MligTC455_25461 | 312 | 6.5 | Mlig455_017948 | Neo: - Age: - Region-enriched R5: 3.863/0.00000 |
TCEANC2 | 1.828 | 0.875 | - | - | - | - | 0.953 | Mlig455_017948 {REF} {Length: 1856} {TRANSSPLICED} {Pfam: TFIIS helical bundle-like domain [PF08711.13, score=28.6]} {Human: ENSG00000116205, TCEANC2, transcription elongation factor A N-terminal and central domain containing 2, [RH, Score=90.1, Expect=1e-21]} {Mouse: ENSMUSG00000028619, Tceanc2, transcription elongation factor A (SII) N-terminal and central domain containing 2, [RH, Score=83.6, Expect=2e-19]} {Smed: dd_Smed_v6_22739_0_1, dd_Smed_v6_22739_0_1, [Score=47.4, Expect=2e-06]} {RNA1509_13086} {RNA1310_41560, RNA1509_13086} {RNA1509_13086, RNA815_7433} |
| 4. | MligTC455_12211 | 58 | 1.22 | Mlig455_044628 | Neo: - Age: - Region-enriched R2: 6.644/0.01463 |
1.691 | 0.957 | - | - | - | - | 0.734 | Mlig455_044628 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Myb/SANT-like DNA-binding domain [PF13837.8, score=25.3]} {RNA1509_24862} {RNA1310_24568} {RNA815_11589} | |
| 5. | MligTC455_17287 | 26 | 0.54 | Mlig455_069741 | Neo: - Age: - |
0.977 | - | - | - | 0.977 | - | - | Mlig455_069741 {REF} {Length: 1499} {RNA1509_25219} {RNA1310_39523} | |
| 6. | MligTC455_20515 | 1058 | 22.04 | Mlig455_008959 | Neo: Irradiation Age: - Region-enriched R5: 1.041/0.01884 |
RPA1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_008959 {REF} {Length: 2367} {TRANSSPLICED} {Pfam: Replication factor-A C terminal domain [PF08646.12, score=154.5]; Replication protein A OB domain [PF16900.7, score=113.5]; Replication factor-A protein 1, N-terminal domain [PF04057.14, score=63.1]; OB-fold nucleic acid binding domain [PF01336.27, score=53.2]; Cell division control protein 24, OB domain 3 [PF17244.4, score=28.5]} {Human: ENSG00000132383, RPA1, replication protein A1, [RH, Score=496, Expect=1e-168]} {Mouse: ENSMUSG00000000751, Rpa1, replication protein A1, [RH, Score=496, Expect=2e-168]} {Dmel: FBgn0010173, RpA-70, Replication Protein A 70, [RH, Score=434, Expect=9e-145]} {Celegans: WBGene00017546, rpa-1, Probable replication factor A 73 kDa subunit, [RH, Score=217, Expect=1e-61]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [RH, Score=416, Expect=1e-138]} {RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1310_7820.1, RNA1509_35290, RNA1509_4117, RNA1509_54395} {RNA1509_35290, RNA1509_4117, RNA1509_54395, RNA815_2777} |
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