Data search
Results for MligTC455_17359
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17359 | 134 | 2.80 | Mlig455_062472 | Neo: - Age: - |
Mlig455_062472 {REF} {Length: 1761} {Pfam: Sleepless protein [PF17064.7, score=23.4]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=75.5, Expect=8e-18]} {RNA1509_27456} {RNA1310_16614} {RNA815_12658} |
Cumulative graph for MligTC455_17359
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.357 | 1.987 | 0.23771 | 0.88275 | |
| RegionR2 | 0.67 | 1.987 | 0.55445 | 0.91878 | |
| RegionR3 | 0.449 | 1.987 | 0.66132 | 1.00000 | |
| RegionR4 | 0.59 | 1.987 | 0.61120 | 0.92237 | |
| RegionR5 | 0.751 | 1.987 | 0.46633 | 0.82842 | |
| RegionR6 | 1.363 | 1.987 | 0.16784 | 0.72402 | |
| RegionR7 | 1.399 | 1.987 | 0.23670 | 0.86046 | |
| RegionR8 | 0.136 | 1.987 | 0.83469 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.324 | 1.987 | 0.99995 | 1.00000 | |
| RegenerationR2 | -0.084 | 1.987 | 0.89477 | 1.00000 | |
| RegenerationR3 | -1.172 | 1.987 | 0.18895 | 0.62420 | |
| RegenerationR4 | -0.687 | 1.987 | 0.44538 | 0.83964 | |
| RegenerationR5 | -0.162 | 1.987 | 0.83230 | 0.99828 | |
| RegenerationR6 | 0.514 | 1.987 | 0.50130 | 0.80718 | |
| RegenerationBL | 0.742 | 1.987 | 0.40356 | 0.77271 | |
| RegenerationTP | 0.937 | 1.987 | 0.35916 | 0.79936 |
Genes with expression patterns similar to MligTC455_17359
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17359 | 134 | 2.8 | Mlig455_062472 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_062472 {REF} {Length: 1761} {Pfam: Sleepless protein [PF17064.7, score=23.4]} {Smed: dd_Smed_v6_3898_0_1, dd_Smed_v6_3898_0_1, [RH, Score=75.5, Expect=8e-18]} {RNA1509_27456} {RNA1310_16614} {RNA815_12658} | |
| 2. | MligTC455_32308 | 616 | 12.84 | Mlig455_050858 | Neo: - Age: Up-Down-Down Region-enriched R8: 2.186/0.00970 |
0.971 | - | - | - | 0.971 | - | - | Mlig455_050858 {REF} {Length: 9789} {Pfam: Mucin-like glycoprotein [PF01456.19, score=24.1]} {RNA1509_37922} {RNA1310_501.1} {RNA815_49.1} | |
| 3. | MligTC455_28086 | 316 | 6.58 | Mlig455_024878 | Neo: - Age: Down-Up-Up Region-enriched R7: 5.514/0.00000 |
MPEG1 | 0.967 | - | - | - | 0.967 | - | - | Mlig455_024878 {REF} {Length: 3380} {Pfam: MAC/Perforin domain [PF01823.21, score=70.8]} {Human: ENSG00000197629, MPEG1, macrophage expressed 1, [Score=326, Expect=1e-100]} {Mouse: ENSMUSG00000046805, Mpeg1, macrophage expressed gene 1, [Score=320, Expect=2e-98]; ENSMUSG00000040065, Pfpl, pore forming protein-like, [Score=311, Expect=3e-95]} {Smed: dd_Smed_v6_10990_0_1, dd_Smed_v6_10990_0_1, [Score=306, Expect=4e-94]} {RNA1509_22751} {RNA1310_8390.1} {RNA815_3477} |
| 4. | MligTC455_25404 | 47 | 0.99 | Mlig455_040918 | Neo: - Age: - |
0.964 | - | - | 0.964 | - | - | - | Mlig455_040918 {REF} {Length: 3959} {Pfam: Putative DNA-binding domain [PF04326.16, score=35.2]} {RNA1509_47755} {RNA1310_47762} {RNA815_40947} | |
| 5. | MligTC455_42797 | 850 | 17.72 | Mlig455_005346, Mlig455_005462 | Neo: - Age: logFC(26M/2M)=0.238 Region-enriched R8: 2.079/0.01724 |
TRIM56 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_005346 {REF} {Length: 3200} {Pfam: B-box zinc finger [PF00643.26, score=42.9]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=5e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=129, Expect=6e-31]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=124, Expect=3e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=3e-135]} {RNA1509_47369, RNA1509_51768} {RNA1310_12686.2, RNA1509_47369} {RNA1509_47369, RNA815_8648} Mlig455_005462 {REF} {Length: 3888} {Pfam: B-box zinc finger [PF00643.26, score=42.8]; RING-type zinc-finger [PF13445.8, score=35.2]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=29.2]; Ring finger domain [PF13639.8, score=23.8]; zinc-RING finger domain [PF14634.8, score=23.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=23.0]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.5]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.1]} {Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=128, Expect=2e-30]; ENSG00000109654, TRIM2, tripartite motif containing 2, [RH, Score=125, Expect=7e-30]} {Mouse: ENSMUSG00000027993, Trim2, tripartite motif-containing 2, [Score=128, Expect=1e-30]; ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=123, Expect=4e-29]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=405, Expect=5e-135]} {RNA1509_51181, RNA1509_51768} {RNA1310_12686.1, RNA1509_51181, RNA1509_51768} {RNA1509_51181, RNA1509_51768, RNA815_8648} |
| 6. | MligTC455_38299 | 562 | 11.71 | Mlig455_057143 | Neo: - Age: Down-Up-Down Region-enriched R8: 3.394/0.00342 |
CDX2 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_057143 {REF} {Length: 2892} {Pfam: Homeodomain [PF00046.31, score=62.0]} {Human: ENSG00000165556, CDX2, caudal type homeobox 2, [RH, Score=106, Expect=4e-25]; ENSG00000113722, CDX1, caudal type homeobox 1, [RH, Score=104, Expect=7e-25]} {Mouse: ENSMUSG00000024619, Cdx1, caudal type homeobox 1, [RH, Score=104, Expect=5e-25]} {Dmel: FBgn0000251, cad, caudal, [RH, Score=103, Expect=8e-24]} {Celegans: WBGene00003912, pal-1, Homeobox protein pal-1, [RH, Score=99.4, Expect=2e-23]} {Smed: dd_Smed_v6_2442_0_1, dd_Smed_v6_2442_0_1, [Score=71.6, Expect=2e-14]} {RNA1509_20207} {RNA1310_9296.1, RNA1509_20207} {RNA1509_20207, RNA815_10543} |
| 7. | MligTC455_32307 | 539 | 11.22 | Mlig455_011147 | Neo: - Age: Up-Down-Down Region-enriched R8: 2.468/0.00517 |
0.95 | - | - | - | 0.950 | - | - | Mlig455_011147 {REF} {Length: 16741} {RNA1509_37922, RNA1509_45554, RNA1509_48986} {RNA1310_501.1, RNA1509_45554, RNA1509_48986} {RNA1509_45554, RNA1509_48986, RNA815_331.1} | |
| 8. | MligTC455_49026 | 215 | 4.48 | Mlig455_037206 | Neo: - Age: Down-Up-Down |
HSPG2 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_037206 {REF} {Length: 4399} {Pfam: Immunoglobulin domain [PF13927.8, score=184.9]; Immunoglobulin domain [PF13895.8, score=134.5]; Immunoglobulin I-set domain [PF07679.18, score=112.6]; Immunoglobulin domain [PF00047.27, score=95.1]; Immunoglobulin V-set domain [PF07686.19, score=61.1]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=42.0]; Fibronectin type III domain [PF00041.23, score=37.5]; Immunoglobulin domain [PF18452.3, score=35.0]; C17orf99 Ig domain [PF17736.3, score=23.3]} {Human: ENSG00000142798, HSPG2, heparan sulfate proteoglycan 2, [Score=117, Expect=8e-26]} {Mouse: ENSMUSG00000055632, Hmcn2, hemicentin 2, [Score=132, Expect=2e-30]} {Dmel: FBgn0000547, ed, echinoid, [Score=217, Expect=3e-57]} {Celegans: WBGene00018215, igcm-1, ImmunoGlobulin-like Cell adhesion Molecule family, [Score=138, Expect=6e-33]} {Smed: dd_Smed_v6_13903_0_1, dd_Smed_v6_13903_0_1, [Score=162, Expect=2e-40]} {RNA1509_31910} {RNA1310_43699} {RNA815_44505} |
Berezikov Lab - 2020-2021 © ERIBA