Data search
Results for MligTC455_17378
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17378 | 303 | 6.31 | Mlig455_038356 | Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.705 Region-enriched R5: 2.725/0.00018 |
Mlig455_038356 {REF} {Length: 2360} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.2]} {RNA1509_22698} {RNA1310_2971.2} {RNA815_24859} |
Cumulative graph for MligTC455_17378
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.926 | 3.232 | 0.51844 | 1.00000 | |
| RegionR2 | 0.526 | 3.232 | 0.54748 | 0.91363 | |
| RegionR3 | 0.476 | 3.232 | 0.52729 | 1.00000 | |
| RegionR4 | 0.559 | 3.232 | 0.48140 | 0.80901 | |
| RegionR5 | 2.725 | 3.232 | 0.00001 | 0.00018 | |
| RegionR6 | 2.191 | 3.232 | 0.00206 | 0.06189 | |
| RegionR7 | -2.093 | 3.232 | 0.99917 | 1.00000 | |
| RegionR8 | -5.311 | 3.232 | 0.08246 | 0.54505 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.318 | 3.232 | 0.64588 | 1.00000 | |
| RegenerationR2 | -0.461 | 3.232 | 0.55790 | 0.89766 | |
| RegenerationR3 | 1.814 | 3.232 | 0.01103 | 0.19150 | |
| RegenerationR4 | 1.113 | 3.232 | 0.10086 | 0.49214 | |
| RegenerationR5 | 0.035 | 3.232 | 0.94376 | 1.00000 | |
| RegenerationR6 | -0.065 | 3.232 | 0.92282 | 1.00000 | |
| RegenerationBL | 3.582 | 3.232 | 0.00488 | 0.06463 | |
| RegenerationTP | 4.726 | 3.232 | 0.00702 | 0.14122 |
Genes with expression patterns similar to MligTC455_17378
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17378 | 303 | 6.31 | Mlig455_038356 | Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.705 Region-enriched R5: 2.725/0.00018 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_038356 {REF} {Length: 2360} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.2]} {RNA1509_22698} {RNA1310_2971.2} {RNA815_24859} | |
| 2. | MligTC455_35109 | 141 | 2.93 | Mlig455_046718 | Neo: - Age: Down-Down-Up |
SMYD2 | 1.694 | 0.961 | - | - | - | 0.733 | - | Mlig455_046718 {REF} {Length: 2158} {TRANSSPLICED} {Pfam: MYND finger [PF01753.20, score=41.2]} {Human: ENSG00000143499, SMYD2, SET and MYND domain containing 2, [Score=50.8, Expect=8e-07]; ENSG00000004838, ZMYND10, zinc finger MYND-type containing 10, [Score=48.9, Expect=4e-06]} {Mouse: ENSMUSG00000026603, Smyd2, SET and MYND domain containing 2, [Score=47.8, Expect=6e-06]} {Dmel: FBgn0036624, RAF2, RING-associated factor 2, [Score=46.6, Expect=1e-05]} {Celegans: WBGene00044070, set-18, SET (Trithorax/polycomb) domain containing, [Score=46.2, Expect=1e-05]} {Smed: dd_Smed_v6_9973_0_1, dd_Smed_v6_9973_0_1, [Score=50.1, Expect=5e-07]} {RNA1509_13959} {RNA1310_19936.1} {RNA815_19051} |
| 3. | MligTC455_19570 | 96 | 2 | Mlig455_003840 | Neo: - Age: - Region-enriched R4: 3.687/0.03464 |
CRYZ | 0.978 | - | - | 0.978 | - | - | - | Mlig455_003840 {REF} {Length: 1513} {TRANSSPLICED} {Pfam: Zinc-binding dehydrogenase [PF00107.28, score=65.4]; Zinc-binding dehydrogenase [PF13602.8, score=55.6]; Alcohol dehydrogenase GroES-like domain [PF08240.14, score=32.3]} {Human: ENSG00000116791, CRYZ, crystallin zeta, [RH, Score=288, Expect=1e-95]} {Mouse: ENSMUSG00000028199, Cryz, crystallin, zeta, [RH, Score=293, Expect=4e-98]} {Dmel: FBgn0033883, CG16935, [RH, Score=68.9, Expect=9e-13]} {Celegans: WBGene00009554, F39B2.3, [RH, Score=218, Expect=1e-68]} {Smed: dd_Smed_v6_2717_0_1, dd_Smed_v6_2717_0_1, [RH, Score=253, Expect=9e-83]} {RNA1509_24531} {RNA1310_28792.1, RNA1509_24531} {RNA1509_24531, RNA815_12373.1} |
| 4. | MligTC455_32654 | 93 | 1.93 | Mlig455_038742 | Neo: - Age: Down-Up-Up Region-enriched R5: 3.441/0.00267 |
0.965 | - | 0.965 | - | - | - | - | Mlig455_038742 {REF} {Length: 2381} {TRANSSPLICED} {RNA1509_55323} {RNA1310_9315.1} {RNA815_3200.1} | |
| 5. | MligTC455_28033 | 408 | 8.49 | Mlig455_042311 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.379 Region-enriched R4: 3.192/0.00369 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_042311 {REF} {Length: 328} {NoTransDecoderORF} {RNA1509_67} {RNA1310_851.1} {RNA815_80.2} | |
| 6. | MligTC455_15068 | 150 | 3.12 | Mlig455_060686 | Neo: Irradiation Age: - Region-enriched R5: 2.339/0.00152 Regeneration-upregulated BL: 4.321 Regeneration-enriched BL: 4.321 |
0.952 | 0.952 | - | - | - | - | - | Mlig455_060686 {REF} {Length: 3820} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=29.0]; C2H2-type zinc finger [PF13894.8, score=23.8]} {Mouse: ENSMUSG00000036898, Zfp157, zinc finger protein 157, [Score=53.5, Expect=3e-07]} {RNA1509_40259} {RNA1310_23296, RNA1509_40259} {RNA1509_40259, RNA815_10259} |
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