Data search
Results for MligTC455_28033
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_28033 | 408 | 8.49 | Mlig455_042311 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.379 Region-enriched R4: 3.192/0.00369 |
Mlig455_042311 {REF} {Length: 328} {NoTransDecoderORF} {RNA1509_67} {RNA1310_851.1} {RNA815_80.2} |
Cumulative graph for MligTC455_28033
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.503 | 3.517 | 0.21344 | 0.85439 | |
| RegionR2 | -0.365 | 3.517 | 0.93782 | 1.00000 | |
| RegionR3 | 0.667 | 3.517 | 0.48825 | 0.98733 | |
| RegionR4 | 3.192 | 3.517 | 0.00027 | 0.00369 | |
| RegionR5 | 1.546 | 3.517 | 0.05969 | 0.21264 | |
| RegionR6 | 0.691 | 3.517 | 0.47739 | 1.00000 | |
| RegionR7 | -1.022 | 3.517 | 0.98817 | 1.00000 | |
| RegionR8 | 0.794 | 3.517 | 0.54228 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 3.278 | 3.517 | 0.61465 | 1.00000 | |
| RegenerationR2 | -0.878 | 3.517 | 0.16954 | 0.60846 | |
| RegenerationR3 | 0.287 | 3.517 | 0.65115 | 0.92950 | |
| RegenerationR4 | 0.073 | 3.517 | 0.91649 | 1.00000 | |
| RegenerationR5 | -0.007 | 3.517 | 0.98317 | 1.00000 | |
| RegenerationR6 | 1.299 | 3.517 | 0.05258 | 0.28718 | |
| RegenerationBL | 1.632 | 3.517 | 0.02297 | 0.16593 | |
| RegenerationTP | 1.091 | 3.517 | 0.23388 | 0.67954 |
Genes with expression patterns similar to MligTC455_28033
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_28033 | 408 | 8.49 | Mlig455_042311 | Neo: - Age: Down-Down-Up, logFC(26M/2M)=2.379 Region-enriched R4: 3.192/0.00369 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_042311 {REF} {Length: 328} {NoTransDecoderORF} {RNA1509_67} {RNA1310_851.1} {RNA815_80.2} | |
| 2. | MligTC455_51816 | 845 | 17.6 | Mlig455_002795, Mlig455_002810 | Neo: - Age: - |
ZDHHC17 | 0.98 | - | - | - | - | 0.980 | - | Mlig455_002795 {REF} {Length: 2018} {Pfam: Ligand-gated ion channel [PF00060.28, score=41.4]} {RNA1509_25098} {RNA1310_16351} {RNA815_15602} Mlig455_002810 {REF} {Length: 6458} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=139.3]; Ankyrin repeats (many copies) [PF13857.8, score=93.3]; Ankyrin repeats (many copies) [PF13637.8, score=90.4]; DHHC palmitoyltransferase [PF01529.22, score=80.3]; Ankyrin repeat [PF13606.8, score=78.1]; Ankyrin repeat [PF00023.32, score=73.0]} {Human: ENSG00000186908, ZDHHC17, zinc finger DHHC-type containing 17, [Score=160, Expect=3e-41]} {Mouse: ENSMUSG00000035798, Zdhhc17, zinc finger, DHHC domain containing 17, [Score=157, Expect=2e-40]} {Dmel: FBgn0029137, Patsas, [Score=311, Expect=4e-98]} {Celegans: WBGene00018009, dhhc-3, Palmitoyltransferase, [Score=83.2, Expect=1e-17]} {Smed: dd_Smed_v6_16314_0_1, dd_Smed_v6_16314_0_1, [Score=217, Expect=2e-63]} {RNA1509_25007, RNA1509_25098, RNA1509_45982, RNA1509_51990, RNA1509_56684} {RNA1310_9910, RNA1509_25007, RNA1509_25098, RNA1509_45982, RNA1509_51990, RNA1509_56684} {RNA1509_25007, RNA1509_25098, RNA1509_45982, RNA1509_51990, RNA1509_56684, RNA815_13589} |
| 3. | MligTC455_35361 | 1420 | 29.59 | Mlig455_008509 | Neo: - Age: - |
HDHD5 | 0.971 | - | - | - | - | 0.971 | - | Mlig455_008509 {REF} {Length: 2717} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=51.4]; HAD-hyrolase-like [PF13242.8, score=33.8]} {Human: ENSG00000069998, HDHD5, haloacid dehalogenase like hydrolase domain containing 5, [Score=287, Expect=1e-92]} {Mouse: ENSMUSG00000058979, Hdhd5, haloacid dehalogenase like hydrolase domain containing 5, [RH, Score=274, Expect=8e-88]} {Celegans: WBGene00019255, H32C10.1, [RH, Score=210, Expect=1e-63]} {Smed: dd_Smed_v6_1170_0_1, dd_Smed_v6_1170_0_1, [RH, Score=425, Expect=3e-147]} {RNA1509_48618, RNA1509_9914} {RNA1310_18496, RNA1509_48618, RNA1509_9914} {RNA1509_48618, RNA1509_9914, RNA815_7610} |
| 4. | MligTC455_45571 | 861 | 17.95 | Mlig455_014290 | Neo: - Age: Down-Down-Up Region-enriched R4: 3.155/0.00000 Regeneration-upregulated BL: 3.314 Regeneration-enriched BL: 3.314 |
CRYL1 | 0.969 | - | - | - | - | 0.969 | - | Mlig455_014290 {REF} {Length: 1393} {Pfam: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain [PF02737.20, score=151.9]; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain [PF00725.24, score=33.8]} {Human: ENSG00000165475, CRYL1, crystallin lambda 1, [RH, Score=263, Expect=2e-86]} {Mouse: ENSMUSG00000021947, Cryl1, crystallin, lambda 1, [RH, Score=250, Expect=2e-81]} {Dmel: FBgn0030737, CG9914, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00022130, Y71F9B.9, [RH, Score=238, Expect=8e-77]} {Smed: dd_Smed_v6_1696_0_1, dd_Smed_v6_1696_0_1, [RH, Score=170, Expect=9e-51]} {RNA1509_34725} {RNA1310_23652, RNA1509_34725} {RNA1509_34725, RNA815_8421.1} |
| 5. | MligTC455_36070 | 1777 | 37.03 | Mlig455_021994 | Neo: Int S/G2/M Age: - |
0.965 | - | - | - | - | - | 0.965 | Mlig455_021994 {REF} {Length: 5883} {RNA1509_1771, RNA1509_20806, RNA1509_2105, RNA1509_25464, RNA1509_32532, RNA1509_39722, RNA1509_47127, RNA1509_51538} {RNA1310_5110.1, RNA1509_1771, RNA1509_20806, RNA1509_2105, RNA1509_25464, RNA1509_32532, RNA1509_39722, RNA1509_47127, RNA1509_51538} {RNA1509_1771, RNA1509_20806, RNA1509_2105, RNA1509_25464, RNA1509_32532, RNA1509_39722, RNA1509_47127, RNA1509_51538, RNA815_2031.1} | |
| 6. | MligTC455_17378 | 303 | 6.31 | Mlig455_038356 | Neo: Irradiation Age: Up-Down-Up, logFC(26M/2M)=0.705 Region-enriched R5: 2.725/0.00018 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_038356 {REF} {Length: 2360} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.2]} {RNA1509_22698} {RNA1310_2971.2} {RNA815_24859} |
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