Data search
Results for MligTC455_17380
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17380 | 546 | 11.38 | Mlig455_013927 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.295/0.04544 |
Mlig455_013927 {REF} {Length: 509} {NoTransDecoderORF} {RNA1509_16299} {RNA1310_25375} {RNA815_11880} |
Cumulative graph for MligTC455_17380
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.651 | 3.857 | 0.34037 | 0.98545 | |
| RegionR2 | -0.181 | 3.857 | 0.75590 | 1.00000 | |
| RegionR3 | -0.475 | 3.857 | 0.37233 | 0.90618 | |
| RegionR4 | 1.295 | 3.857 | 0.00669 | 0.04544 | |
| RegionR5 | 1.178 | 3.857 | 0.00141 | 0.01341 | |
| RegionR6 | 0.722 | 3.857 | 0.09476 | 0.56525 | |
| RegionR7 | 1.066 | 3.857 | 0.04121 | 0.38893 | |
| RegionR8 | -1.954 | 3.857 | 0.06091 | 0.48095 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.769 | 3.857 | 0.41301 | 1.00000 | |
| RegenerationR2 | 0.664 | 3.857 | 0.07207 | 0.43607 | |
| RegenerationR3 | 0.766 | 3.857 | 0.08184 | 0.46935 | |
| RegenerationR4 | -0.247 | 3.857 | 0.54776 | 0.89169 | |
| RegenerationR5 | 0.087 | 3.857 | 0.80368 | 0.98931 | |
| RegenerationR6 | 0.515 | 3.857 | 0.19638 | 0.53616 | |
| RegenerationBL | 1.055 | 3.857 | 0.06025 | 0.28523 | |
| RegenerationTP | 0.81 | 3.857 | 0.25245 | 0.70032 |
Genes with expression patterns similar to MligTC455_17380
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17380 | 546 | 11.38 | Mlig455_013927 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.295/0.04544 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_013927 {REF} {Length: 509} {NoTransDecoderORF} {RNA1509_16299} {RNA1310_25375} {RNA815_11880} | |
| 2. | MligTC455_17381 | 615 | 12.81 | Mlig455_039368 | Neo: Irradiation Age: logFC(26M/2M)=0.310 Region-enriched R5: 1.014/0.01425 |
ARID2 | 5.75 | 0.979 | 0.980 | 0.914 | 0.951 | 0.977 | 0.949 | Mlig455_039368 {REF} {Length: 4626} {Pfam: ARID/BRIGHT DNA binding domain [PF01388.23, score=67.4]} {Human: ENSG00000189079, ARID2, AT-rich interaction domain 2, [RH, Score=232, Expect=1e-61]} {Mouse: ENSMUSG00000033237, Arid2, AT rich interactive domain 2 (ARID, RFX-like), [RH, Score=234, Expect=3e-62]} {Dmel: FBgn0042085, Bap170, Brahma associated protein 170kD, [RH, Score=140, Expect=2e-33]} {Celegans: WBGene00007433, swsn-7, SWI/SNF nucleosome remodeling complex component, [RH, Score=166, Expect=2e-41]} {Smed: dd_Smed_v6_9463_0_1, dd_Smed_v6_9463_0_1, [RH, Score=246, Expect=8e-67]} {RNA1509_16299, RNA1509_8714} {RNA1310_10572.1, RNA1509_16299} {RNA1509_16299, RNA815_7460.2} |
| 3. | MligTC455_18342 | 164 | 3.42 | Mlig455_046698 | Neo: - Age: Down-Up-Down |
PPIP5K2 | 1.81 | - | - | - | - | 0.847 | 0.963 | Mlig455_046698 {REF} {Length: 5524} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 2) [PF00328.24, score=302.8]; Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain [PF18086.3, score=119.7]; RimK-like ATP-grasp domain [PF08443.13, score=19.2]} {Human: ENSG00000145725, PPIP5K2, diphosphoinositol pentakisphosphate kinase 2, [Score=897, Expect=0.0]; ENSG00000168781, PPIP5K1, diphosphoinositol pentakisphosphate kinase 1, [Score=881, Expect=0.0]} {Mouse: ENSMUSG00000040648, Ppip5k2, diphosphoinositol pentakisphosphate kinase 2, [Score=894, Expect=0.0]; ENSMUSG00000033526, Ppip5k1, diphosphoinositol pentakisphosphate kinase 1, [Score=860, Expect=0.0]} {Dmel: FBgn0027279, l(1)G0196, lethal (1) G0196, [Score=922, Expect=0.0]} {Celegans: WBGene00018508, F46F11.1, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, [RH, Score=813, Expect=0.0]} {Smed: dd_Smed_v6_7203_0_1, dd_Smed_v6_7203_0_1, [Score=913, Expect=0.0]} {RNA1509_34791} {RNA1310_2444} {RNA815_14016} |
| 4. | MligTC455_20586 | 596 | 12.41 | Mlig455_016355 | Neo: Int S/G2/M Age: - |
GPS1 | 1.757 | - | - | - | 0.779 | - | 0.978 | Mlig455_016355 {REF} {Length: 2810} {TRANSSPLICED} {Pfam: 26S proteasome subunit RPN7 [PF10602.11, score=151.8]; PCI domain [PF01399.29, score=57.5]} {Human: ENSG00000169727, GPS1, G protein pathway suppressor 1, [RH, Score=400, Expect=6e-135]} {Mouse: ENSMUSG00000025156, Gps1, G protein pathway suppressor 1, [RH, Score=404, Expect=2e-136]} {Dmel: FBgn0027057, CSN1b, COP9 signalosome subunit 1b, [RH, Score=366, Expect=1e-121]} {Celegans: WBGene00000813, csn-1, COP9 signalosome complex subunit 1, [RH, Score=179, Expect=1e-49]} {Smed: dd_Smed_v6_2705_0_1, dd_Smed_v6_2705_0_1, [RH, Score=305, Expect=5e-98]} {RNA1509_36879, RNA1509_8713} {RNA1310_17431.1, RNA1509_36879, RNA1509_8713} {RNA1509_36879, RNA1509_8713, RNA815_5660} |
| 5. | MligTC455_44224 | 1425 | 29.69 | Mlig455_029951, Mlig455_067209 | Neo: - Age: - Regeneration-upregulated BL: 1.921 Regeneration-enriched BL: 1.921 |
TRIM3, TRIM71 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_029951 {REF} {Length: 8382} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=78.4]; B-box zinc finger [PF00643.26, score=30.4]; 6-bladed beta-propeller [PF17170.6, score=22.3]; RING-type zinc-finger [PF13445.8, score=19.5]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=119, Expect=9e-27]; ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=119, Expect=7e-27]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=118, Expect=9e-27]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=466, Expect=9e-147]} {Celegans: WBGene00003598, nhl-2, NHL (Ring finger b-box coiled coil) domain containing, [RH, Score=195, Expect=5e-51]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=583, Expect=0.0]} {RNA1509_3154} {RNA1310_1339} {RNA815_5017} Mlig455_067209 {REF} {Length: 8386} {TRANSSPLICED} {Pfam: NHL repeat [PF01436.23, score=78.4]; B-box zinc finger [PF00643.26, score=30.4]; 6-bladed beta-propeller [PF17170.6, score=22.4]; RING-type zinc-finger [PF13445.8, score=19.4]} {Human: ENSG00000110171, TRIM3, tripartite motif containing 3, [Score=119, Expect=4e-27]; ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=119, Expect=7e-27]} {Mouse: ENSMUSG00000036989, Trim3, tripartite motif-containing 3, [Score=119, Expect=6e-27]} {Dmel: FBgn0026206, mei-P26, meiotic P26, [RH, Score=468, Expect=3e-147]} {Celegans: WBGene00003598, nhl-2, NHL (Ring finger b-box coiled coil) domain containing, [RH, Score=195, Expect=4e-51]} {Smed: dd_Smed_v6_6250_0_1, dd_Smed_v6_6250_0_1, [RH, Score=584, Expect=0.0]} {RNA1509_3154, RNA1509_40626, RNA1509_47998} {RNA1310_1339, RNA1509_3154, RNA1509_40626, RNA1509_47998} {RNA1509_3154, RNA1509_40626, RNA1509_47998, RNA815_5017} |
| 6. | MligTC455_44167 | 1076 | 22.43 | Mlig455_059891 | Neo: - Age: logFC(26M/2M)=0.416 Regeneration-upregulated BL: 1.576 Regeneration-enriched BL: 1.576 |
SRSF7 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_059891 {REF} {Length: 1013} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.9]; RNA recognition motif [PF16367.7, score=23.9]; Zinc knuckle [PF00098.25, score=22.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=19.8]; Zinc knuckle [PF13917.8, score=19.5]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=147, Expect=3e-45]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=147, Expect=2e-45]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=105, Expect=5e-28]} {Celegans: WBGene00013293, Y57G11A.5, [Score=76.6, Expect=2e-18]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=129, Expect=9e-39]} {RNA1509_37237, RNA1509_48999} {RNA1310_34684.1, RNA1509_48999} {RNA1509_48999, RNA815_20639} |
| 7. | MligTC455_20797 | 1741 | 36.27 | Mlig455_054800, Mlig455_054894 | Neo: - Age: - Region-enriched R5: 1.367/0.00000 Regeneration-upregulated R6: 1.065 Regeneration-enriched R6: 1.065 |
MEMO1 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_054800 {REF} {Length: 3119} {TRANSSPLICED} {Pfam: Memo-like protein [PF01875.19, score=282.9]} {Human: ENSG00000162959, MEMO1, mediator of cell motility 1, [RH, Score=312, Expect=3e-106]} {Mouse: ENSMUSG00000058704, Memo1, mediator of cell motility 1, [RH, Score=311, Expect=3e-106]} {Dmel: FBgn0038110, CG8031, [RH, Score=338, Expect=4e-117]} {Celegans: WBGene00016500, memo-1, Protein memo-1 homolog, [RH, Score=290, Expect=5e-98]} {Smed: dd_Smed_v6_4673_0_1, dd_Smed_v6_4673_0_1, [RH, Score=325, Expect=8e-112]} {RNA1509_18877, RNA1509_22115, RNA1509_44869} {RNA1310_19423, RNA1509_18877, RNA1509_22115, RNA1509_44869} {RNA1509_18877, RNA1509_22115, RNA1509_44869, RNA815_8073.1} Mlig455_054894 {REF} {Length: 3082} {TRANSSPLICED} {Pfam: Memo-like protein [PF01875.19, score=283.0]} {Human: ENSG00000162959, MEMO1, mediator of cell motility 1, [RH, Score=312, Expect=2e-106]} {Mouse: ENSMUSG00000058704, Memo1, mediator of cell motility 1, [RH, Score=311, Expect=3e-106]} {Dmel: FBgn0038110, CG8031, [RH, Score=339, Expect=3e-117]} {Celegans: WBGene00016500, memo-1, Protein memo-1 homolog, [RH, Score=291, Expect=2e-98]} {Smed: dd_Smed_v6_4673_0_1, dd_Smed_v6_4673_0_1, [RH, Score=325, Expect=4e-112]} {RNA1509_22115, RNA1509_47236, RNA1509_9747} {RNA1310_19550, RNA1509_47236, RNA1509_9747} {RNA1509_47236, RNA1509_9747, RNA815_8073.1} |