Data search
Results for MligTC455_17398
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17398 | 1473 | 30.69 | Mlig455_056391, Mlig455_058599, Mlig455_070776 | Neo: - Age: - |
Mlig455_056391 {REF} {Length: 476} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29664} {RNA1310_86041} {RNA815_53979} Mlig455_058599 {REF} {Length: 447} {NoTransDecoderORF} {RNA1509_29664} {RNA1310_86041} {RNA815_53979} Mlig455_070776 {REF} {Length: 473} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29664} {RNA1310_86041} {RNA815_53979} |
Cumulative graph for MligTC455_17398
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.92 | 5.073 | 0.41205 | 1.00000 | |
| RegionR2 | 0.066 | 5.073 | 0.96743 | 1.00000 | |
| RegionR3 | 0.631 | 5.073 | 0.63449 | 1.00000 | |
| RegionR4 | 0.472 | 5.073 | 0.75381 | 1.00000 | |
| RegionR5 | -0.022 | 5.073 | 0.98801 | 1.00000 | |
| RegionR6 | 0.282 | 5.073 | 0.83314 | 1.00000 | |
| RegionR7 | -0.1 | 5.073 | 0.94502 | 1.00000 | |
| RegionR8 | 0.59 | 5.073 | 0.67761 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.425 | 5.073 | 0.64738 | 1.00000 | |
| RegenerationR2 | 0.869 | 5.073 | 0.60384 | 0.91742 | |
| RegenerationR3 | -0.302 | 5.073 | 0.85797 | 1.00000 | |
| RegenerationR4 | 0.408 | 5.073 | 0.81079 | 0.98978 | |
| RegenerationR5 | 0.607 | 5.073 | 0.72022 | 0.95955 | |
| RegenerationR6 | 0.439 | 5.073 | 0.79902 | 0.97646 | |
| RegenerationBL | 1.486 | 5.073 | 0.26689 | 0.62582 | |
| RegenerationTP | 0.725 | 5.073 | 0.64307 | 0.98516 |
Genes with expression patterns similar to MligTC455_17398
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17398 | 1473 | 30.69 | Mlig455_056391, Mlig455_058599, Mlig455_070776 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056391 {REF} {Length: 476} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29664} {RNA1310_86041} {RNA815_53979} Mlig455_058599 {REF} {Length: 447} {NoTransDecoderORF} {RNA1509_29664} {RNA1310_86041} {RNA815_53979} Mlig455_070776 {REF} {Length: 473} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29664} {RNA1310_86041} {RNA815_53979} |
|
| 2. | MligTC455_19085 | 95 | 1.98 | Mlig455_021540 | Neo: - Age: - |
0.965 | - | - | - | 0.965 | - | - | Mlig455_021540 {REF} {Length: 2045} {RNA1509_39251} {RNA1310_9860} {RNA815_3403} | |
| 3. | MligTC455_29597 | 76 | 1.58 | Mlig455_006922, Mlig455_017936 | Neo: - Age: - |
0.961 | - | - | - | 0.961 | - | - | Mlig455_006922 {REF} {Length: 940} {NoTransDecoderORF} {RNA1509_52102} {RNA1310_142651} {RNA815_35011} Mlig455_017936 {REF} {Length: 214} {NoTransDecoderORF} {RNA1310_91364} |
|
| 4. | MligTC455_47886 | 409 | 8.53 | Mlig455_052268, Mlig455_052359 | Neo: - Age: Up-Down-Down |
0.959 | - | - | - | - | 0.959 | - | Mlig455_052268 {REF} {Length: 3338} {RNA1509_40745} {RNA1310_7619} {RNA815_36192} Mlig455_052359 {REF} {Length: 5246} {RNA1509_40745} {RNA1310_7619, RNA1509_40745} {RNA1509_40745, RNA815_36192} |
|
| 5. | MligTC455_13466 | 77 | 1.6 | Mlig455_024443 | Neo: - Age: - Region-enriched R2: 4.749/0.03840 Regeneration-upregulated R5: 4.247 Regeneration-enriched R5: 4.247 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_024443 {REF} {Length: 381} {RNA1310_302.2} | |
| 6. | MligTC455_35592 | 184 | 3.84 | Mlig455_062155 | Neo: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_062155 {REF} {Length: 1849} {RNA1509_33655} {RNA1310_17820.1, RNA1509_33655} {RNA1509_33655, RNA815_11646} | |
| 7. | MligTC455_33175 | 175 | 3.64 | Mlig455_043352 | Neo: - Age: Up-Down-Down |
PPP1R12A | 0.951 | - | - | - | 0.951 | - | - | Mlig455_043352 {REF} {Length: 6024} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=98.4]; Ankyrin repeats (3 copies) [PF12796.9, score=97.7]; Ankyrin repeats (many copies) [PF13857.8, score=85.9]; Ankyrin repeat [PF00023.32, score=70.9]; Ankyrin repeat [PF13606.8, score=62.6]; cGMP-dependent protein kinase interacting domain [PF15898.7, score=41.6]} {Human: ENSG00000058272, PPP1R12A, protein phosphatase 1 regulatory subunit 12A, [Score=264, Expect=3e-74]} {Mouse: ENSMUSG00000019907, Ppp1r12a, protein phosphatase 1, regulatory subunit 12A, [Score=263, Expect=5e-74]} {Dmel: FBgn0005536, Mbs, Myosin binding subunit, [Score=239, Expect=2e-71]} {Celegans: WBGene00003196, mel-11, MEL-11, [Score=237, Expect=1e-65]} {Smed: dd_Smed_v6_8624_0_1, dd_Smed_v6_8624_0_1, [RH, Score=234, Expect=6e-66]} {RNA1509_16757, RNA1509_39080} {RNA1310_5211.1, RNA1509_39080} {RNA1509_39080, RNA815_18256.1} |
Berezikov Lab - 2020-2021 © ERIBA