Data search
Results for MligTC455_17403
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17403 | 1493 | 31.11 | Mlig455_002656 | Neo: - Age: - |
CNTNAP2 | Mlig455_002656 {REF} {Length: 5560} {Pfam: Laminin G domain [PF02210.26, score=234.4]; Laminin G domain [PF00054.25, score=159.1]; F5/8 type C domain [PF00754.27, score=91.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=28.2]; EGF-like domain [PF00008.29, score=21.5]} {Human: ENSG00000174469, CNTNAP2, contactin associated protein like 2, [RH, Score=553, Expect=2e-173]; ENSG00000155052, CNTNAP5, contactin associated protein like 5, [RH, Score=530, Expect=5e-165]} {Mouse: ENSMUSG00000039419, Cntnap2, contactin associated protein-like 2, [RH, Score=533, Expect=3e-166]} {Dmel: FBgn0013997, Nrx-IV, Neurexin IV, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00003772, nlr-1, Neurexin Like receptor, [RH, Score=253, Expect=1e-68]} {Smed: dd_Smed_v6_2622_0_1, dd_Smed_v6_2622_0_1, [RH, Score=1056, Expect=0.0]} {RNA1509_4451} {RNA1310_686.2} {RNA815_263} |
Cumulative graph for MligTC455_17403
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.194 | 5.088 | 0.27723 | 0.92828 | |
| RegionR2 | -0.135 | 5.088 | 0.73355 | 1.00000 | |
| RegionR3 | -0.343 | 5.088 | 0.32326 | 0.86130 | |
| RegionR4 | 0.759 | 5.088 | 0.05951 | 0.21684 | |
| RegionR5 | 0.054 | 5.088 | 0.86275 | 1.00000 | |
| RegionR6 | -0.142 | 5.088 | 0.67780 | 1.00000 | |
| RegionR7 | 0.38 | 5.088 | 0.31416 | 0.94894 | |
| RegionR8 | 0.621 | 5.088 | 0.14370 | 0.69255 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.878 | 5.088 | 0.54402 | 1.00000 | |
| RegenerationR2 | 0.294 | 5.088 | 0.36690 | 0.79368 | |
| RegenerationR3 | -0.043 | 5.088 | 0.90927 | 1.00000 | |
| RegenerationR4 | -0.721 | 5.088 | 0.06252 | 0.40028 | |
| RegenerationR5 | -0.131 | 5.088 | 0.71191 | 0.95648 | |
| RegenerationR6 | 0.175 | 5.088 | 0.64242 | 0.89447 | |
| RegenerationBL | 0.31 | 5.088 | 0.40084 | 0.76987 | |
| RegenerationTP | -0.273 | 5.088 | 0.49999 | 0.90069 |
Genes with expression patterns similar to MligTC455_17403
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17403 | 1493 | 31.11 | Mlig455_002656 | Neo: - Age: - |
CNTNAP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002656 {REF} {Length: 5560} {Pfam: Laminin G domain [PF02210.26, score=234.4]; Laminin G domain [PF00054.25, score=159.1]; F5/8 type C domain [PF00754.27, score=91.2]; Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=28.2]; EGF-like domain [PF00008.29, score=21.5]} {Human: ENSG00000174469, CNTNAP2, contactin associated protein like 2, [RH, Score=553, Expect=2e-173]; ENSG00000155052, CNTNAP5, contactin associated protein like 5, [RH, Score=530, Expect=5e-165]} {Mouse: ENSMUSG00000039419, Cntnap2, contactin associated protein-like 2, [RH, Score=533, Expect=3e-166]} {Dmel: FBgn0013997, Nrx-IV, Neurexin IV, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00003772, nlr-1, Neurexin Like receptor, [RH, Score=253, Expect=1e-68]} {Smed: dd_Smed_v6_2622_0_1, dd_Smed_v6_2622_0_1, [RH, Score=1056, Expect=0.0]} {RNA1509_4451} {RNA1310_686.2} {RNA815_263} |
| 2. | MligTC455_17402 | 1446 | 30.13 | Mlig455_002513 | Neo: - Age: Down-Down-Up |
CNTNAP2 | 5.827 | 0.940 | 0.992 | 0.995 | 0.987 | 0.942 | 0.971 | Mlig455_002513 {REF} {Length: 5370} {Pfam: Laminin G domain [PF02210.26, score=232.5]; Laminin G domain [PF00054.25, score=158.1]; F5/8 type C domain [PF00754.27, score=91.2]; EGF-like domain [PF00008.29, score=21.5]} {Human: ENSG00000174469, CNTNAP2, contactin associated protein like 2, [RH, Score=552, Expect=5e-173]; ENSG00000155052, CNTNAP5, contactin associated protein like 5, [RH, Score=529, Expect=2e-164]} {Mouse: ENSMUSG00000039419, Cntnap2, contactin associated protein-like 2, [RH, Score=533, Expect=8e-166]} {Dmel: FBgn0013997, Nrx-IV, Neurexin IV, [RH, Score=682, Expect=0.0]} {Celegans: WBGene00003772, nlr-1, Neurexin Like receptor, [RH, Score=252, Expect=2e-68]} {Smed: dd_Smed_v6_2622_0_1, dd_Smed_v6_2622_0_1, [RH, Score=1056, Expect=0.0]} {RNA1509_1218, RNA1509_4451, RNA1509_54102} {RNA1310_686.2, RNA1509_1218, RNA1509_4451, RNA1509_54102} {RNA1509_1218, RNA1509_4451, RNA1509_54102, RNA815_263} |
| 3. | MligTC455_42634 | 4044 | 84.26 | Mlig455_070344 | Neo: - Age: Down-Up-Down Regeneration-upregulated BL: 1.425 Regeneration-enriched BL: 1.425 |
ATP1A2 | 1.785 | - | - | - | 0.955 | 0.830 | - | Mlig455_070344 {REF} {Length: 3621} {Pfam: E1-E2 ATPase [PF00122.22, score=151.4]; Cation transporting ATPase, C-terminus [PF00689.23, score=144.1]; Cation transport ATPase (P-type) [PF13246.8, score=78.1]; haloacid dehalogenase-like hydrolase [PF00702.28, score=72.7]; Cation transporter/ATPase, N-terminus [PF00690.28, score=59.0]; haloacid dehalogenase-like hydrolase [PF08282.14, score=25.8]} {Human: ENSG00000018625, ATP1A2, ATPase Na+/K+ transporting subunit alpha 2, [RH, Score=1508, Expect=0.0]; ENSG00000163399, ATP1A1, ATPase Na+/K+ transporting subunit alpha 1, [RH, Score=1505, Expect=0.0]; ENSG00000105409, ATP1A3, ATPase Na+/K+ transporting subunit alpha 3, [RH, Score=1497, Expect=0.0]; ENSG00000285505, AC010616.2, novel protein, ATP1A3-RABAC1 readthrough, [RH, Score=1483, Expect=0.0]} {Mouse: ENSMUSG00000007097, Atp1a2, ATPase, Na+/K+ transporting, alpha 2 polypeptide, [RH, Score=1502, Expect=0.0]; ENSMUSG00000040907, Atp1a3, ATPase, Na+/K+ transporting, alpha 3 polypeptide, [RH, Score=1495, Expect=0.0]; ENSMUSG00000033161, Atp1a1, ATPase, Na+/K+ transporting, alpha 1 polypeptide, [RH, Score=1491, Expect=0.0]} {Dmel: FBgn0002921, Atpalpha, Na pump alpha subunit, [RH, Score=1560, Expect=0.0]} {Celegans: WBGene00001137, eat-6, Sodium/potassium-transporting ATPase subunit alpha, [RH, Score=1483, Expect=0.0]} {Smed: dd_Smed_v6_1179_0_1, dd_Smed_v6_1179_0_1, [RH, Score=1654, Expect=0.0]} {RNA1509_990} {RNA1310_3228.1} {RNA815_592.2} |
| 4. | MligTC455_42189 | 996 | 20.75 | Mlig455_049567 | Neo: - Age: - |
ATP1B1 | 1.731 | - | - | - | 0.958 | 0.773 | - | Mlig455_049567 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=206.6]} {Human: ENSG00000143153, ATP1B1, ATPase Na+/K+ transporting subunit beta 1, [RH, Score=129, Expect=1e-34]} {Mouse: ENSMUSG00000026576, Atp1b1, ATPase, Na+/K+ transporting, beta 1 polypeptide, [RH, Score=130, Expect=2e-35]} {Dmel: FBgn0032946, nrv3, nervana 3, [RH, Score=162, Expect=2e-47]} {Celegans: WBGene00007646, nkb-1, Sodium/potassium-transporting ATPase subunit beta-1, [Score=156, Expect=2e-45]} {Smed: dd_Smed_v6_7917_0_1, dd_Smed_v6_7917_0_1, [Score=228, Expect=1e-73]} {RNA1509_10587, RNA1509_45937} {RNA1310_12857.1, RNA1509_10587, RNA1509_45937} {RNA1509_10587, RNA1509_45937, RNA815_10364} |
| 5. | MligTC455_45672 | 743 | 15.49 | Mlig455_034867 | Neo: - Age: - Region-enriched R4: 1.237/0.02291 |
TMEM80 | 0.964 | - | - | 0.964 | - | - | - | Mlig455_034867 {REF} {Length: 1153} {TRANSSPLICED} {Pfam: Predicted membrane protein [PF09799.11, score=79.4]} {Human: ENSG00000177042, TMEM80, transmembrane protein 80, [RH, Score=53.9, Expect=1e-08]} {Celegans: WBGene00194710, mks-2, MecKel-Gruber Syndrome (MKS) homolog, [RH, Score=49.7, Expect=6e-08]} {Smed: dd_Smed_v6_14636_0_1, dd_Smed_v6_14636_0_1, [Score=73.6, Expect=5e-17]} {RNA1509_35137, RNA1509_36429, RNA1509_39419} {RNA1310_30722.1, RNA1509_36429, RNA1509_39419} {RNA1509_36429, RNA1509_39419, RNA815_13266} |
| 6. | MligTC455_30672 | 1486 | 30.96 | Mlig455_039627 | Neo: - Age: logFC(26M/2M)=-0.336 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_039627 {REF} {Length: 4991} {TRANSSPLICED} {Pfam: TMEM154 protein family [PF15102.8, score=21.9]; Family of unknown function (DUF5305) [PF17231.4, score=21.2]; Domain of unknown function (DUF3377) [PF11857.10, score=21.1]} {RNA1509_15005, RNA1509_23948, RNA1509_33625, RNA1509_41258, RNA1509_8814} {RNA1310_5516.1, RNA1509_15005, RNA1509_23948, RNA1509_33625, RNA1509_41258, RNA1509_8814} {RNA1509_15005, RNA1509_23948, RNA1509_33625, RNA1509_41258, RNA1509_8814, RNA815_2563.1} | |
| 7. | MligTC455_30671 | 1425 | 29.69 | Mlig455_039597 | Neo: - Age: - |
0.96 | - | - | 0.960 | - | - | - | Mlig455_039597 {REF} {Length: 689} {NoTransDecoderORF} {RNA1509_15005} {RNA1310_6745.1} {RNA815_19937.1} | |
| 8. | MligTC455_50104 | 1791 | 37.32 | Mlig455_042984, Mlig455_043017 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_042984 {REF} {Length: 63} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_35523} {RNA1310_62829} {RNA815_46239} Mlig455_043017 {REF} {Length: 74} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_29538} {RNA1310_62829} {RNA815_46239} |
|
| 9. | MligTC455_25893 | 1723 | 35.89 | Mlig455_012195 | Neo: - Age: Down-Up-Down Regeneration-downregulated BL: -1.958 Regeneration-depleted BL: -1.958 |
SERINC1 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_012195 {REF} {Length: 2613} {TRANSSPLICED} {tRNA: Glu(CTC),pseudo, score=25.1} {Pfam: Serine incorporator (Serinc) [PF03348.17, score=491.7]} {Human: ENSG00000111897, SERINC1, serine incorporator 1, [RH, Score=377, Expect=8e-127]} {Mouse: ENSMUSG00000019877, Serinc1, serine incorporator 1, [RH, Score=397, Expect=5e-135]} {Dmel: FBgn0028399, TMS1, [Score=332, Expect=2e-109]} {Celegans: WBGene00021956, Y57E12AL.1, [RH, Score=358, Expect=1e-119]} {Smed: dd_Smed_v6_1130_0_1, dd_Smed_v6_1130_0_1, [RH, Score=490, Expect=2e-171]} {RNA1509_6329, RNA1509_8130} {RNA1310_16171, RNA1509_8130} {RNA1509_8130, RNA815_6171} |
Berezikov Lab - 2020-2021 © ERIBA