Data search
Results for MligTC455_17437
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17437 | 25 | 0.52 | Mlig455_038092 | Neo: - Age: - |
Mlig455_038092 {REF} {Length: 2254} {NoTransDecoderORF} {RNA1509_57489} {RNA1310_102144} {RNA815_36553} |
Cumulative graph for MligTC455_17437
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.463 | 0.625 | 1.00000 | 1.00000 | |
| RegionR2 | 2.708 | 0.625 | 0.99988 | 1.00000 | |
| RegionR3 | 0.485 | 0.625 | 0.99992 | 1.00000 | |
| RegionR4 | -2.804 | 0.625 | 0.99981 | 1.00000 | |
| RegionR5 | -0.714 | 0.625 | 0.99989 | 1.00000 | |
| RegionR6 | -0.016 | 0.625 | 0.99995 | 1.00000 | |
| RegionR7 | 1.149 | 0.625 | 0.99996 | 1.00000 | |
| RegionR8 | 1.655 | 0.625 | 0.99997 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.364 | 0.625 | 1.00000 | 1.00000 | |
| RegenerationR2 | 1.29 | 0.625 | 0.99989 | 1.00000 | |
| RegenerationR3 | 1.703 | 0.625 | 1.00000 | 1.00000 | |
| RegenerationR4 | 1.607 | 0.625 | 0.99957 | 1.00000 | |
| RegenerationR5 | 1.108 | 0.625 | 0.99955 | 1.00000 | |
| RegenerationR6 | 2.57 | 0.625 | 0.99981 | 1.00000 | |
| RegenerationBL | 0.877 | 0.625 | 0.99984 | 1.00000 | |
| RegenerationTP | 1.877 | 0.625 | 0.99989 | 1.00000 |
Genes with expression patterns similar to MligTC455_17437
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17437 | 25 | 0.52 | Mlig455_038092 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_038092 {REF} {Length: 2254} {NoTransDecoderORF} {RNA1509_57489} {RNA1310_102144} {RNA815_36553} | |
| 2. | MligTC455_30214 | 590 | 12.28 | Mlig455_006816 | Neo: - Age: - |
PIF1 | 0.959 | - | - | - | - | 0.959 | - | Mlig455_006816 {REF} {Length: 9659} {Pfam: PIF1-like helicase [PF05970.16, score=336.9]; AAA domain [PF13604.8, score=49.7]; AAA domain [PF13245.8, score=21.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=90.1, Expect=1e-18]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=85.9, Expect=2e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=92.8, Expect=1e-19]} {Celegans: WBGene00019136, F59H6.5, [Score=217, Expect=1e-61]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=85.9, Expect=9e-18]} {RNA1509_7353} {RNA1310_1123.1} {RNA815_252.1} |
| 3. | MligTC455_30882 | 95 | 1.98 | Mlig455_022356 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_022356 {REF} {Length: 2707} {Celegans: WBGene00016348, C33E10.6, [Score=255, Expect=6e-74]} {Smed: dd_Smed_v6_9974_1_7, dd_Smed_v6_9974_1_7, [Score=287, Expect=5e-89]} {RNA1509_8360} {RNA1310_576.1} {RNA815_1671.1} | |
| 4. | MligTC455_28321 | 81 | 1.69 | Mlig455_060693 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_060693 {REF} {Length: 1631} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=46.4]; Recombination endonuclease VII [PF02945.17, score=22.6]} {Celegans: WBGene00022511, ZC53.4, [Score=177, Expect=4e-47]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=218, Expect=6e-63]} {RNA1509_8360} {RNA1310_576.1} {RNA815_1671.1} | |
| 5. | MligTC455_52216 | 77 | 1.61 | Mlig455_030561 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.537 Regeneration-upregulated R2: 6.017 Regeneration-enriched R2: 6.017 |
MDN1 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_030561 {REF} {Length: 19189} {Pfam: AAA domain (dynein-related subfamily) [PF07728.16, score=274.6]; ATPase family associated with various cellular activities (AAA) [PF07726.13, score=124.3]; AAA ATPase domain [PF13191.8, score=54.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=51.5]; P-loop containing dynein motor region [PF12775.9, score=41.9]; AAA domain [PF13401.8, score=36.7]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=36.0]; Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=33.4]; AAA domain [PF13238.8, score=31.1]; Sigma-54 interaction domain [PF00158.28, score=28.1]; AAA domain [PF13604.8, score=25.3]; AAA domain [PF13671.8, score=24.3]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=22.5]; Sigma-54 interaction domain [PF14532.8, score=22.5]; ABC transporter [PF00005.29, score=19.2]; RsgA GTPase [PF03193.18, score=18.8]} {Human: ENSG00000112159, MDN1, midasin AAA ATPase 1, [Score=145, Expect=2e-33]} {Mouse: ENSMUSG00000058006, Mdn1, midasin AAA ATPase 1, [Score=136, Expect=1e-30]} {Dmel: FBgn0033661, CG13185, [Score=154, Expect=4e-36]} {Celegans: WBGene00018898, F55F10.1, Midasin, [Score=144, Expect=3e-33]} {Smed: dd_Smed_v6_12419_0_1, dd_Smed_v6_12419_0_1, [Score=127, Expect=2e-28]} {RNA1509_28014} {RNA1310_1503, RNA1509_28014} {RNA1509_28014, RNA815_11159} |
| 6. | MligTC455_29046 | 32 | 0.67 | Mlig455_063674 | Neo: - Age: Up-Down-Up |
UBR4 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_063674 {REF} {Length: 3549} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_31376} {RNA1310_384.1} {RNA815_217.1} |
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