Data search
Results for MligTC455_29046
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29046 | 32 | 0.67 | Mlig455_063674 | Neo: - Age: Up-Down-Up |
UBR4 | Mlig455_063674 {REF} {Length: 3549} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_31376} {RNA1310_384.1} {RNA815_217.1} |
Cumulative graph for MligTC455_29046
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.308 | 1.011 | 0.71230 | 1.00000 | |
| RegionR2 | 2.113 | 1.011 | 0.26421 | 0.64635 | |
| RegionR3 | 0.501 | 1.011 | 0.70974 | 1.00000 | |
| RegionR4 | -0.733 | 1.011 | 0.97678 | 1.00000 | |
| RegionR5 | 0.067 | 1.011 | 0.85506 | 1.00000 | |
| RegionR6 | -1.598 | 1.011 | 0.99948 | 1.00000 | |
| RegionR7 | 2.373 | 1.011 | 0.21750 | 0.83559 | |
| RegionR8 | -0.414 | 1.011 | 0.98274 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.966 | 1.011 | 0.70152 | 1.00000 | |
| RegenerationR2 | 0.126 | 1.011 | 0.95272 | 1.00000 | |
| RegenerationR3 | 0.725 | 1.011 | 0.62203 | 0.91741 | |
| RegenerationR4 | 0.771 | 1.011 | 0.63612 | 0.92575 | |
| RegenerationR5 | 0.855 | 1.011 | 0.49193 | 0.85421 | |
| RegenerationR6 | 2.24 | 1.011 | 0.24768 | 0.59607 | |
| RegenerationBL | -0.447 | 1.011 | 0.90219 | 1.00000 | |
| RegenerationTP | 1.49 | 1.011 | 0.50922 | 0.90648 |
Genes with expression patterns similar to MligTC455_29046
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29046 | 32 | 0.67 | Mlig455_063674 | Neo: - Age: Up-Down-Up |
UBR4 | 2 | - | - | - | - | 1.000 | 1.000 | Mlig455_063674 {REF} {Length: 3549} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=838.0]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [Score=530, Expect=7e-162]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [Score=528, Expect=5e-161]} {Dmel: FBgn0011230, poe, purity of essence, [Score=444, Expect=8e-133]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [Score=242, Expect=2e-65]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [Score=189, Expect=1e-48]} {RNA1509_31376} {RNA1310_384.1} {RNA815_217.1} |
| 2. | MligTC455_45529 | 1112 | 23.17 | Mlig455_023689 | Neo: - Age: - |
TMEM33 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_023689 {REF} {Length: 1827} {TRANSSPLICED} {Pfam: Transmembrane protein 33/Nucleoporin POM33 [PF03661.15, score=200.5]} {Human: ENSG00000109133, TMEM33, transmembrane protein 33, [RH, Score=155, Expect=3e-46]} {Mouse: ENSMUSG00000037720, Tmem33, transmembrane protein 33, [RH, Score=157, Expect=8e-47]} {Dmel: FBgn0266449, Kr-h2, Kruppel homolog 2, [RH, Score=122, Expect=2e-33]} {Celegans: WBGene00012555, npp-25, Transmembrane protein 33 homolog, [RH, Score=127, Expect=4e-35]} {Smed: dd_Smed_v6_3358_0_1, dd_Smed_v6_3358_0_1, [RH, Score=130, Expect=1e-36]} {RNA1509_16724, RNA1509_21588, RNA1509_21640} {RNA1310_15997.2, RNA1509_16724, RNA1509_21588, RNA1509_21640} {RNA1509_16724, RNA1509_21588, RNA1509_21640, RNA815_544.2} |
| 3. | MligTC455_29066 | 215 | 4.47 | Mlig455_043845 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_043845 {REF} {Length: 3707} {TRANSSPLICED} {RNA1509_13168} {RNA1310_4523} {RNA815_5087} | |
| 4. | MligTC455_39356 | 15 | 0.3 | Mlig455_027654 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_027654 {REF} {Length: 4822} {Celegans: WBGene00019192, H12I13.3, [Score=78.2, Expect=7e-18]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=46.6, Expect=6e-07]} {RNA1509_4722} {RNA1310_655.1} {RNA815_335.1} | |
| 5. | MligTC455_42864 | 708 | 14.76 | Mlig455_015796, Mlig455_045760 | Neo: - Age: logFC(26M/2M)=-0.253 |
MINDY4 | 0.953 | - | - | - | - | - | 0.953 | Mlig455_015796 {REF} {Length: 5062} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=179.9]} {Human: ENSG00000106125, MINDY4, MINDY lysine 48 deubiquitinase 4, [Score=113, Expect=1e-24]} {Mouse: ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [Score=127, Expect=3e-29]} {Dmel: FBgn0036143, CG14142, [Score=86.3, Expect=5e-17]} {Smed: dd_Smed_v6_13105_0_1, dd_Smed_v6_13105_0_1, [RH, Score=99.0, Expect=8e-21]} {RNA1509_19414} {RNA1310_5390.2, RNA1509_19414} {RNA1509_19414, RNA815_2292} Mlig455_045760 {REF} {Length: 5069} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4205) [PF13898.8, score=177.8]} {Human: ENSG00000106125, MINDY4, MINDY lysine 48 deubiquitinase 4, [Score=112, Expect=2e-24]} {Mouse: ENSMUSG00000038022, Mindy4, MINDY lysine 48 deubiquitinase 4, [Score=126, Expect=6e-29]} {Dmel: FBgn0036143, CG14142, [Score=85.5, Expect=8e-17]} {Smed: dd_Smed_v6_13105_0_1, dd_Smed_v6_13105_0_1, [RH, Score=98.2, Expect=1e-20]} {RNA1509_19414} {RNA1310_5390.2} {RNA815_2292} |
| 6. | MligTC455_15170 | 36 | 0.75 | Mlig455_016666 | Neo: - Age: Up-Down-Down |
GAB1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_016666 {REF} {Length: 3810} {TRANSSPLICED} {Pfam: PH domain [PF00169.31, score=44.4]} {Human: ENSG00000109458, GAB1, GRB2 associated binding protein 1, [RH, Score=59.7, Expect=8e-09]; ENSG00000160219, GAB3, GRB2 associated binding protein 3, [RH, Score=59.7, Expect=7e-09]} {Mouse: ENSMUSG00000032750, Gab3, growth factor receptor bound protein 2-associated protein 3, [RH, Score=55.1, Expect=1e-07]} {Dmel: FBgn0016794, dos, daughter of sevenless, [RH, Score=56.2, Expect=5e-08]} {Smed: dd_Smed_v6_8815_0_1, dd_Smed_v6_8815_0_1, [RH, Score=51.2, Expect=1e-06]} {RNA1509_7659} {RNA1310_20098} {RNA815_10250} |
| 7. | MligTC455_31906 | 195 | 4.06 | Mlig455_068976 | Neo: - Age: Up-Up-Down |
0.952 | - | - | - | - | 0.952 | - | Mlig455_068976 {REF} {Length: 6455} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=26.5]} {RNA1509_31473} {RNA1310_5450.1} {RNA815_16253.2} | |
| 8. | MligTC455_17437 | 25 | 0.52 | Mlig455_038092 | Neo: - Age: - |
0.951 | - | - | - | - | 0.951 | - | Mlig455_038092 {REF} {Length: 2254} {NoTransDecoderORF} {RNA1509_57489} {RNA1310_102144} {RNA815_36553} | |
| 9. | MligTC455_35457 | 590 | 12.3 | Mlig455_025018 | Neo: - Age: - Region-enriched R5: 1.112/0.00472 |
TRAPPC8 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_025018 {REF} {Length: 7696} {Pfam: ER-Golgi trafficking TRAPP I complex 85 kDa subunit [PF12739.9, score=353.3]} {Human: ENSG00000153339, TRAPPC8, trafficking protein particle complex 8, [RH, Score=546, Expect=1e-170]} {Mouse: ENSMUSG00000033382, Trappc8, trafficking protein particle complex 8, [RH, Score=541, Expect=2e-168]} {Dmel: FBgn0260655, l(3)76BDm, lethal (3) 76BDm, [Score=393, Expect=2e-115]} {Celegans: WBGene00018512, trpp-8, TRansport Protein Particle, [RH, Score=162, Expect=4e-40]} {Smed: dd_Smed_v6_7549_0_1, dd_Smed_v6_7549_0_1, [RH, Score=616, Expect=0.0]} {RNA1509_3381} {RNA1310_1277, RNA1509_3381} {RNA1509_3381, RNA815_2844} |
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