TomoSeq data search

Data search

Results for MligTC455_17465

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17465

3639

75.81

Mlig455_031877

Neo: -

Age: logFC(26M/2M)=0.427

MEX3D

Mlig455_031877 {REF} {Length: 2898} {Pfam: KH domain [PF00013.31, score=72.7]; KH domain [PF07650.19, score=22.9]; KH domain [PF13083.8, score=19.8]; NusA-like KH domain [PF13184.8, score=19.6]} {Human: ENSG00000181588, MEX3D, mex-3 RNA binding family member D, [RH, Score=115, Expect=1e-26]; ENSG00000183496, MEX3B, mex-3 RNA binding family member B, [RH, Score=114, Expect=2e-26]} {Mouse: ENSMUSG00000048696, Mex3d, mex3 RNA binding family member D, [RH, Score=116, Expect=6e-27]; ENSMUSG00000057706, Mex3b, mex3 RNA binding family member B, [RH, Score=114, Expect=1e-26]} {Dmel: FBgn0039920, CG11360, [Score=103, Expect=4e-23]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [Score=65.5, Expect=4e-11]} {RNA1509_3569} {RNA1310_5120.1} {RNA815_1516.1}

Cumulative graph for MligTC455_17465

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.324	6.32	0.66071	1.00000
RegionR2	0.272	6.32	0.60427	0.95378
RegionR3	-0.022	6.32	0.96327	1.00000
RegionR4	0.448	6.32	0.39617	0.72272
RegionR5	0.239	6.32	0.59724	0.95508
RegionR6	-0.114	6.32	0.80763	1.00000
RegionR7	0.039	6.32	0.93483	1.00000
RegionR8	-0.539	6.32	0.33409	0.96756

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.448	6.32	0.64431	1.00000
RegenerationR2	0.545	6.32	0.34531	0.77911
RegenerationR3	0.659	6.32	0.27065	0.70483
RegenerationR4	0.525	6.32	0.38870	0.80645
RegenerationR5	0.018	6.32	0.97513	1.00000
RegenerationR6	0.167	6.32	0.77898	0.96707
RegenerationBL	-0.641	6.32	0.24276	0.59627
RegenerationTP	0.382	6.32	0.49508	0.89797

Genes with expression patterns similar to MligTC455_17465

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17465	3639	75.81	Mlig455_031877	Neo: - Age: logFC(26M/2M)=0.427	MEX3D	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_031877 {REF} {Length: 2898} {Pfam: KH domain [PF00013.31, score=72.7]; KH domain [PF07650.19, score=22.9]; KH domain [PF13083.8, score=19.8]; NusA-like KH domain [PF13184.8, score=19.6]} {Human: ENSG00000181588, MEX3D, mex-3 RNA binding family member D, [RH, Score=115, Expect=1e-26]; ENSG00000183496, MEX3B, mex-3 RNA binding family member B, [RH, Score=114, Expect=2e-26]} {Mouse: ENSMUSG00000048696, Mex3d, mex3 RNA binding family member D, [RH, Score=116, Expect=6e-27]; ENSMUSG00000057706, Mex3b, mex3 RNA binding family member B, [RH, Score=114, Expect=1e-26]} {Dmel: FBgn0039920, CG11360, [Score=103, Expect=4e-23]} {Celegans: WBGene00003229, mex-3, Muscle EXcess, [Score=100, Expect=1e-22]} {Smed: dd_Smed_v6_1999_0_1, dd_Smed_v6_1999_0_1, [Score=65.5, Expect=4e-11]} {RNA1509_3569} {RNA1310_5120.1} {RNA815_1516.1}
2.	MligTC455_48409	252	5.25	Mlig455_000937	Neo: - Age: logFC(26M/2M)=-1.004		1.724	-	-	-	0.758	0.966	-	Mlig455_000937 {REF} {Length: 3906} {Pfam: Mab-21 protein [PF03281.16, score=40.8]} {RNA1509_23744, RNA1509_44882} {RNA1310_5050.1, RNA1509_23744, RNA1509_44882} {RNA1509_23744, RNA1509_44882, RNA815_9143}
3.	MligTC455_52646	1059	22.07	Mlig455_035837	Neo: - Age: - Region-enriched R2: 1.308/0.00778	FBXL13	1.689	-	-	-	0.735	0.954	-	Mlig455_035837 {REF} {Length: 2683} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=92.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=69.2]; Leucine rich repeat [PF13855.8, score=34.6]; F-box-like [PF12937.9, score=21.2]; F-box domain [PF00646.35, score=19.5]} {Human: ENSG00000161040, FBXL13, F-box and leucine rich repeat protein 13, [RH, Score=370, Expect=3e-116]} {Mouse: ENSMUSG00000048520, Fbxl13, F-box and leucine-rich repeat protein 13, [RH, Score=367, Expect=1e-114]} {Dmel: FBgn0038385, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=104, Expect=1e-22]} {Celegans: WBGene00015350, fbxl-1, Uncharacterized F-box/LRR-repeat protein C02F5.7, [Score=122, Expect=2e-29]} {Smed: dd_Smed_v6_14890_0_1, dd_Smed_v6_14890_0_1, [RH, Score=597, Expect=0.0]} {RNA1509_11787, RNA1509_47513} {RNA1310_7673, RNA1509_11787, RNA1509_47513} {RNA1509_11787, RNA1509_47513, RNA815_2345.1}
4.	MligTC455_20417	92	1.91	Mlig455_001928	Neo: - Age: -		1.667	-	-	-	0.950	0.717	-	Mlig455_001928 {REF} {Length: 569} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45067} {RNA1310_7045.1} {RNA815_16809}
5.	MligTC455_34258	536	11.17	Mlig455_039100	Neo: - Age: Up-Down-Down	UNC80	0.983	-	-	-	-	0.983	-	Mlig455_039100 {REF} {Length: 6695} {Pfam: Protein UNC80 [PF19424.1, score=644.7]} {Human: ENSG00000144406, UNC80, unc-80 homolog, NALCN channel complex subunit, [Score=622, Expect=0.0]} {Mouse: ENSMUSG00000055567, Unc80, unc-80, NALCN activator, [Score=619, Expect=0.0]} {Dmel: FBgn0039536, unc80, uncoordinated 80, [Score=642, Expect=0.0]} {Celegans: WBGene00006812, unc-80, [Score=620, Expect=0.0]} {Smed: dd_Smed_v6_5118_0_1, dd_Smed_v6_5118_0_1, [Score=854, Expect=0.0]} {RNA1509_23382} {RNA1310_463.1} {RNA815_194.1}
6.	MligTC455_35664	1772	36.91	Mlig455_020393, Mlig455_028392, Mlig455_058437	Neo: - Age: logFC(26M/2M)=-0.217 Region-enriched R4: 1.033/0.04115	CLHC1	0.965	-	-	-	-	0.965	-	Mlig455_020393 {REF} {Length: 1999} {Pfam: Translin-associated factor X-interacting N-terminus [PF15739.7, score=57.3]; Clathrin-H-link [PF13838.8, score=34.4]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [RH, Score=155, Expect=8e-40]} {Mouse: ENSMUSG00000020461, Clhc1, clathrin heavy chain linker domain containing 1, [RH, Score=160, Expect=8e-42]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [RH, Score=145, Expect=4e-37]} {RNA1509_8364} {RNA1310_5794.1} {RNA815_1706} Mlig455_028392 {REF} {Length: 1994} {TRANSSPLICED} {Pfam: Clathrin-H-link [PF13838.8, score=35.7]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [Score=110, Expect=4e-25]} {Mouse: ENSMUSG00000047126, Cltc, clathrin, heavy polypeptide (Hc), [Score=54.7, Expect=3e-07]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=50.4, Expect=3e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [Score=114, Expect=1e-26]} {RNA1509_8364} {RNA1310_5794.1} {RNA815_1706} Mlig455_058437 {REF} {Length: 2088} {Pfam: Translin-associated factor X-interacting N-terminus [PF15739.7, score=57.4]; Clathrin-H-link [PF13838.8, score=34.4]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [Score=153, Expect=3e-39]} {Mouse: ENSMUSG00000020461, Clhc1, clathrin heavy chain linker domain containing 1, [Score=158, Expect=4e-41]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=50.8, Expect=3e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [Score=144, Expect=9e-37]} {RNA1509_8364} {RNA1310_5794.1} {RNA815_1706}
7.	MligTC455_22444	563	11.73	Mlig455_002477	Neo: - Age: Up-Down-Down		0.96	-	-	-	-	0.960	-	Mlig455_002477 {REF} {Length: 4129} {Pfam: TIR domain [PF13676.8, score=78.3]; Domain of unknown function (DUF4441) [PF14536.8, score=21.3]; Subunit CCDC53 of WASH complex [PF10152.11, score=19.8]; Protein of unknown function (DUF775) [PF05603.14, score=19.2]} {Smed: dd_Smed_v6_9242_0_1, dd_Smed_v6_9242_0_1, [Score=159, Expect=1e-40]} {RNA1509_15248} {RNA1310_4628} {RNA815_1374}
8.	MligTC455_35663	475	9.89	Mlig455_028426	Neo: - Age: -	CLHC1	0.959	-	-	-	-	0.959	-	Mlig455_028426 {REF} {Length: 1005} {Pfam: Translin-associated factor X-interacting N-terminus [PF15739.7, score=57.3]; Clathrin-H-link [PF13838.8, score=34.4]} {Human: ENSG00000162994, CLHC1, clathrin heavy chain linker domain containing 1, [RH, Score=155, Expect=8e-40]} {Mouse: ENSMUSG00000020461, Clhc1, clathrin heavy chain linker domain containing 1, [RH, Score=160, Expect=8e-42]} {Celegans: WBGene00011867, chc-1, Probable clathrin heavy chain 1, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_9605_0_1, dd_Smed_v6_9605_0_1, [RH, Score=145, Expect=4e-37]} {RNA1509_25530} {RNA1310_5794.1} {RNA815_1706}
9.	MligTC455_51515	574	11.96	Mlig455_013209	Neo: - Age: - Region-enriched R2: 2.274/0.00633	DAB2IP	0.958	-	-	-	-	0.958	-	Mlig455_013209 {REF} {Length: 7536} {Pfam: GTPase-activator protein for Ras-like GTPase [PF00616.21, score=65.5]; C2 domain [PF00168.32, score=36.8]} {Human: ENSG00000136848, DAB2IP, DAB2 interacting protein, [Score=355, Expect=1e-103]} {Mouse: ENSMUSG00000026883, Dab2ip, disabled 2 interacting protein, [Score=353, Expect=6e-103]} {Dmel: FBgn0261570, CG42684, [Score=349, Expect=1e-99]} {Celegans: WBGene00001516, gap-2, Ras GTPase-activating protein gap-2, [Score=336, Expect=2e-97]} {Smed: dd_Smed_v6_6499_0_2, dd_Smed_v6_6499_0_2, [RH, Score=292, Expect=6e-82]} {RNA1509_45404} {RNA1310_15354.1} {RNA815_3372}
10.	MligTC455_33620	651	13.55	Mlig455_053546	Neo: - Age: -	SCML2	0.951	-	-	-	-	0.951	-	Mlig455_053546 {REF} {Length: 3040} {TRANSSPLICED} {Pfam: mbt repeat [PF02820.20, score=135.9]; SAM domain (Sterile alpha motif) [PF00536.32, score=46.2]; SLED domain [PF12140.10, score=42.9]; SAM domain (Sterile alpha motif) [PF07647.19, score=34.6]; Sterile alpha motif (SAM)/Pointed domain [PF02198.18, score=23.7]} {Human: ENSG00000102098, SCML2, Scm polycomb group protein like 2, [RH, Score=290, Expect=5e-87]; ENSG00000010803, SCMH1, Scm polycomb group protein homolog 1, [RH, Score=287, Expect=2e-86]} {Mouse: ENSMUSG00000000085, Scmh1, sex comb on midleg homolog 1, [RH, Score=341, Expect=9e-107]} {Dmel: FBgn0003334, Scm, Sex comb on midleg, [RH, Score=256, Expect=2e-73]} {Celegans: WBGene00003041, lin-61, [RH, Score=90.1, Expect=1e-18]} {Smed: dd_Smed_v6_10208_0_2, dd_Smed_v6_10208_0_2, [RH, Score=173, Expect=4e-46]} {RNA1509_42002} {RNA1310_6155} {RNA815_20518}

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