Data search
Results for MligTC455_17508
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17508 | 998 | 20.79 | Mlig455_001150 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.276 |
Mlig455_001150 {REF} {Length: 4283} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=31.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=28.2]} {RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568} {RNA1310_307.1, RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568} {RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568, RNA815_845} |
Cumulative graph for MligTC455_17508
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.777 | 4.592 | 0.39840 | 1.00000 | |
| RegionR2 | 0.05 | 4.592 | 0.90055 | 1.00000 | |
| RegionR3 | 0.14 | 4.592 | 0.65446 | 1.00000 | |
| RegionR4 | 0.312 | 4.592 | 0.39044 | 0.71627 | |
| RegionR5 | 0.489 | 4.592 | 0.07460 | 0.24918 | |
| RegionR6 | 0.279 | 4.592 | 0.36761 | 0.94867 | |
| RegionR7 | -0.054 | 4.592 | 0.89148 | 1.00000 | |
| RegionR8 | -0.439 | 4.592 | 0.38017 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.327 | 4.592 | 0.81338 | 1.00000 | |
| RegenerationR2 | -0.198 | 4.592 | 0.56330 | 0.90040 | |
| RegenerationR3 | 0.217 | 4.592 | 0.55219 | 0.88498 | |
| RegenerationR4 | -0.286 | 4.592 | 0.43997 | 0.83699 | |
| RegenerationR5 | -0.04 | 4.592 | 0.90285 | 1.00000 | |
| RegenerationR6 | 0.274 | 4.592 | 0.44744 | 0.76868 | |
| RegenerationBL | 0.789 | 4.592 | 0.05269 | 0.26491 | |
| RegenerationTP | -0.058 | 4.592 | 0.90536 | 1.00000 |
Genes with expression patterns similar to MligTC455_17508
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17508 | 998 | 20.79 | Mlig455_001150 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.276 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001150 {REF} {Length: 4283} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=31.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=28.2]} {RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568} {RNA1310_307.1, RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568} {RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568, RNA815_845} | |
| 2. | MligTC455_15710 | 639 | 13.3 | Mlig455_035447, Mlig455_061102 | Neo: - Age: Down-Up-Down Region-enriched R5: 2.047/0.00750 |
1.782 | - | - | - | 0.961 | - | 0.821 | Mlig455_035447 {REF} {Length: 2736} {TRANSSPLICED} {RNA1509_16670} {RNA1310_20444} {RNA815_21351} Mlig455_061102 {REF} {Length: 2804} {TRANSSPLICED} {RNA1509_16670} {RNA1310_20444, RNA1509_16670} {RNA1509_16670, RNA815_21351} |
|
| 3. | MligTC455_26088 | 432 | 9.01 | Mlig455_039695 | Neo: - Age: Up-Down-Up |
0.97 | - | - | 0.970 | - | - | - | Mlig455_039695 {REF} {Length: 3843} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=69.8]} {Smed: dd_Smed_v6_13623_0_1, dd_Smed_v6_13623_0_1, [Score=161, Expect=1e-41]} {RNA1509_9385} {RNA1310_8595.2} {RNA815_10654} | |
| 4. | MligTC455_49442 | 335 | 6.99 | Mlig455_024935 | Neo: - Age: - |
FARS2 | 0.967 | - | - | 0.967 | - | - | - | Mlig455_024935 {REF} {Length: 1997} {TRANSSPLICED} {Pfam: tRNA synthetases class II core domain (F) [PF01409.22, score=159.5]; Ferredoxin-fold anticodon binding domain [PF03147.16, score=78.6]} {Human: ENSG00000145982, FARS2, phenylalanyl-tRNA synthetase 2, mitochondrial, [RH, Score=441, Expect=8e-152]} {Mouse: ENSMUSG00000021420, Fars2, phenylalanine-tRNA synthetase 2 (mitochondrial), [RH, Score=443, Expect=8e-153]} {Dmel: FBgn0275436, PheRS-m, Phenylalanyl-tRNA synthetase, mitochondrial, [RH, Score=434, Expect=1e-149]} {Celegans: WBGene00013361, fars-2, Mitochondrial phenylalanyl-tRNA synthetase; Phenylalanyl Amino-acyl tRNA Synthetase, [RH, Score=385, Expect=4e-130]} {Smed: dd_Smed_v6_4882_0_4, dd_Smed_v6_4882_0_4, [RH, Score=430, Expect=4e-148]} {RNA1509_17915, RNA1509_33917, RNA1509_52083, RNA1509_59691} {RNA1310_8998.1, RNA1509_17915, RNA1509_33917, RNA1509_52083, RNA1509_59691} {RNA1509_17915, RNA1509_33917, RNA1509_52083, RNA1509_59691, RNA815_8215} |
| 5. | MligTC455_33041 | 415 | 8.65 | Mlig455_032967 | Neo: - Age: Up-Up-Down |
RAB3C | 0.951 | - | - | 0.951 | - | - | - | Mlig455_032967 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=8e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=3e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=333, Expect=2e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=326, Expect=1e-114]} {Dmel: FBgn0005586, Rab3, [RH, Score=345, Expect=2e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=343, Expect=7e-122]} {RNA1509_20846, RNA1509_33673} {RNA1310_14402, RNA1509_20846, RNA1509_33673} {RNA1509_20846, RNA1509_33673, RNA815_5665.1} |
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