Data search
Results for MligTC455_33041
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_33041 | 415 | 8.65 | Mlig455_032967 | Neo: - Age: Up-Up-Down |
RAB3C | Mlig455_032967 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=8e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=3e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=333, Expect=2e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=326, Expect=1e-114]} {Dmel: FBgn0005586, Rab3, [RH, Score=345, Expect=2e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=343, Expect=7e-122]} {RNA1509_20846, RNA1509_33673} {RNA1310_14402, RNA1509_20846, RNA1509_33673} {RNA1509_20846, RNA1509_33673, RNA815_5665.1} |
Cumulative graph for MligTC455_33041
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.383 | 3.54 | 0.29232 | 0.94460 | |
| RegionR2 | 0.464 | 3.54 | 0.41197 | 0.80528 | |
| RegionR3 | 0.383 | 3.54 | 0.38298 | 0.91455 | |
| RegionR4 | -0.198 | 3.54 | 0.69786 | 0.98708 | |
| RegionR5 | 0.849 | 3.54 | 0.02077 | 0.09964 | |
| RegionR6 | 0.495 | 3.54 | 0.26721 | 0.85566 | |
| RegionR7 | -0.821 | 3.54 | 0.19962 | 0.80697 | |
| RegionR8 | 0.212 | 3.54 | 0.74575 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.081 | 3.54 | 0.34560 | 1.00000 | |
| RegenerationR2 | 0.184 | 3.54 | 0.69096 | 0.95314 | |
| RegenerationR3 | -0.446 | 3.54 | 0.38889 | 0.79543 | |
| RegenerationR4 | -0.087 | 3.54 | 0.86954 | 1.00000 | |
| RegenerationR5 | -0.09 | 3.54 | 0.84214 | 1.00000 | |
| RegenerationR6 | 0.184 | 3.54 | 0.71018 | 0.93023 | |
| RegenerationBL | 0.785 | 3.54 | 0.19060 | 0.52449 | |
| RegenerationTP | -0.608 | 3.54 | 0.45428 | 0.87079 |
Genes with expression patterns similar to MligTC455_33041
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_33041 | 415 | 8.65 | Mlig455_032967 | Neo: - Age: Up-Up-Down |
RAB3C | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_032967 {REF} {Length: 2435} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=208.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=114.1]; ADP-ribosylation factor family [PF00025.23, score=53.7]; Signal recognition particle receptor beta subunit [PF09439.12, score=23.1]; 50S ribosome-binding GTPase [PF01926.25, score=19.3]; Elongation factor Tu GTP binding domain [PF00009.29, score=18.4]} {Human: ENSG00000152932, RAB3C, RAB3C, member RAS oncogene family, [RH, Score=339, Expect=2e-119]; ENSG00000105649, RAB3A, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=8e-116]; ENSG00000105514, RAB3D, RAB3D, member RAS oncogene family, [RH, Score=323, Expect=3e-113]} {Mouse: ENSMUSG00000021700, Rab3c, RAB3C, member RAS oncogene family, [RH, Score=337, Expect=1e-118]; ENSMUSG00000019066, Rab3d, RAB3D, member RAS oncogene family, [RH, Score=333, Expect=2e-117]; ENSMUSG00000031840, Rab3a, RAB3A, member RAS oncogene family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000111277, Rab3a, RAB3A, member RAS onco family, [RH, Score=330, Expect=3e-116]; ENSMUSG00000003411, Rab3b, RAB3B, member RAS oncogene family, [RH, Score=326, Expect=1e-114]} {Dmel: FBgn0005586, Rab3, [RH, Score=345, Expect=2e-122]} {Celegans: WBGene00004267, rab-3, Ras-related protein Rab-3, [RH, Score=336, Expect=2e-118]} {Smed: dd_Smed_v6_5920_0_1, dd_Smed_v6_5920_0_1, [RH, Score=343, Expect=7e-122]} {RNA1509_20846, RNA1509_33673} {RNA1310_14402, RNA1509_20846, RNA1509_33673} {RNA1509_20846, RNA1509_33673, RNA815_5665.1} |
| 2. | MligTC455_50500 | 1323 | 27.57 | Mlig455_044617 | Neo: - Age: Up-Down-Down |
OSBPL6 | 0.968 | - | - | - | - | - | 0.968 | Mlig455_044617 {REF} {Length: 5533} {TRANSSPLICED} {Pfam: Oxysterol-binding protein [PF01237.20, score=371.5]; Pleckstrin homology domain [PF15409.8, score=35.2]; PH domain [PF00169.31, score=28.7]} {Human: ENSG00000079156, OSBPL6, oxysterol binding protein like 6, [RH, Score=411, Expect=2e-126]; ENSG00000070882, OSBPL3, oxysterol binding protein like 3, [RH, Score=405, Expect=3e-124]} {Mouse: ENSMUSG00000042359, Osbpl6, oxysterol binding protein-like 6, [RH, Score=409, Expect=1e-125]; ENSMUSG00000029822, Osbpl3, oxysterol binding protein-like 3, [RH, Score=402, Expect=2e-123]} {Dmel: FBgn0020626, Osbp, Oxysterol binding protein, [Score=261, Expect=2e-73]} {Celegans: WBGene00012930, obr-1, Oxysterol-binding protein, [Score=206, Expect=6e-56]} {Smed: dd_Smed_v6_5423_0_1, dd_Smed_v6_5423_0_1, [RH, Score=437, Expect=3e-137]} {RNA1509_21914, RNA1509_24284, RNA1509_27329, RNA1509_42192, RNA1509_45635, RNA1509_56667} {RNA1310_7422.1, RNA1509_21914, RNA1509_24284, RNA1509_27329, RNA1509_42192, RNA1509_45635} {RNA1509_21914, RNA1509_24284, RNA1509_27329, RNA1509_42192, RNA1509_45635, RNA815_7322} |
| 3. | MligTC455_09750 | 514 | 10.71 | Mlig455_031136 | Neo: - Age: Up-Down-Down |
HUWE1 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_031136 {REF} {Length: 9814} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=303.1]; Ubiquitin binding region [PF14377.8, score=50.5]; UBA/TS-N domain [PF00627.33, score=29.5]} {Human: ENSG00000086758, HUWE1, HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, [RH, Score=680, Expect=0.0]} {Mouse: ENSMUSG00000025261, Huwe1, HECT, UBA and WWE domain containing 1, [RH, Score=680, Expect=0.0]} {Dmel: FBgn0030674, CG8184, [RH, Score=651, Expect=0.0]} {Celegans: WBGene00022069, eel-1, Enhancer of EfL-1 mutant phenotype, [RH, Score=598, Expect=5e-172]} {Smed: dd_Smed_v6_3378_0_1, dd_Smed_v6_3378_0_1, [RH, Score=660, Expect=0.0]} {RNA1509_5302} {RNA1310_235.1} {RNA815_1135} |
| 4. | MligTC455_24642 | 299 | 6.22 | Mlig455_036107 | Neo: - Age: logFC(26M/2M)=0.298 |
ARHGAP26 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_036107 {REF} {Length: 5111} {Pfam: RhoGAP domain [PF00620.29, score=113.5]; BAR domain of APPL family [PF16746.7, score=71.4]; Variant SH3 domain [PF14604.8, score=31.1]; PH domain [PF00169.31, score=28.4]; Variant SH3 domain [PF07653.19, score=27.3]; SH3 domain [PF00018.30, score=20.9]} {Human: ENSG00000145819, ARHGAP26, Rho GTPase activating protein 26, [RH, Score=173, Expect=7e-45]; ENSG00000079482, OPHN1, oligophrenin 1, [RH, Score=172, Expect=3e-44]} {Mouse: ENSMUSG00000031214, Ophn1, oligophrenin 1, [RH, Score=176, Expect=2e-45]} {Dmel: FBgn0030685, Graf, GTPase regulator associated with FAK, [RH, Score=132, Expect=3e-31]} {Celegans: WBGene00020209, T04C9.1, [RH, Score=159, Expect=3e-40]} {Smed: dd_Smed_v6_9033_0_1, dd_Smed_v6_9033_0_1, [Score=76.3, Expect=3e-14]} {RNA1509_23688, RNA1509_30979} {RNA1310_9222, RNA1509_23688, RNA1509_30979} {RNA1509_23688, RNA1509_30979, RNA815_2925} |
| 5. | MligTC455_24641 | 463 | 9.64 | Mlig455_036008, Mlig455_036082 | Neo: - Age: - |
0.961 | - | - | - | - | - | 0.961 | Mlig455_036008 {REF} {Length: 962} {NoTransDecoderORF} {RNA1509_30979} {RNA1310_35010} {RNA815_16781} Mlig455_036082 {REF} {Length: 966} {NoTransDecoderORF} {RNA1509_30979} {RNA1310_35010} {RNA815_16781} |
|
| 6. | MligTC455_31746 | 252 | 5.24 | Mlig455_020444 | Neo: Int S/G2/M Age: - Region-enriched R4: 3.326/0.00065 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_020444 {REF} {Length: 917} {RNA1310_39333.1} {RNA815_12620.1} | |
| 7. | MligTC455_42906 | 262 | 5.47 | Mlig455_031588 | Neo: - Age: - |
EIF2B2 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_031588 {REF} {Length: 1983} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=141.4]} {Human: ENSG00000119718, EIF2B2, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=204, Expect=1e-62]} {Mouse: ENSMUSG00000004788, Eif2b2, eukaryotic translation initiation factor 2B, subunit 2 beta, [RH, Score=205, Expect=4e-63]} {Dmel: FBgn0024996, eIF2Bbeta, eukaryotic translation initiation factor 2B subunit beta, [RH, Score=172, Expect=1e-50]} {Celegans: WBGene00012950, eif-2Bbeta, Eukaryotic Initiation Factor, [RH, Score=75.9, Expect=3e-15]} {Smed: dd_Smed_v6_6270_0_1, dd_Smed_v6_6270_0_1, [RH, Score=120, Expect=2e-31]} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1310_33419, RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782} {RNA1509_13413, RNA1509_31218, RNA1509_40325, RNA1509_51782, RNA815_14402} |
| 8. | MligTC455_47794 | 767 | 15.99 | Mlig455_061481 | Neo: - Age: - |
COPS8 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_061481 {REF} {Length: 1276} {TRANSSPLICED} {Pfam: CSN8/PSMD8/EIF3K family [PF10075.11, score=46.0]} {Human: ENSG00000198612, COPS8, COP9 signalosome subunit 8, [Score=67.4, Expect=2e-13]} {Mouse: ENSMUSG00000034432, Cops8, COP9 signalosome subunit 8, [Score=65.9, Expect=4e-13]} {RNA1509_27754, RNA1509_54334} {RNA1310_39752, RNA1509_27754} {RNA1509_27754, RNA815_30337} |
| 9. | MligTC455_45645 | 826 | 17.21 | Mlig455_034656, Mlig455_067611 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.034/0.02138 |
ZNF43, ZNF616 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_034656 {REF} {Length: 375} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=47.9]; C2H2-type zinc finger [PF13894.8, score=32.5]; Zinc-finger double domain [PF13465.8, score=29.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; C2H2-type zinc finger [PF13912.8, score=23.5]; Zinc-finger of C2H2 type [PF12874.9, score=20.7]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.7]} {Human: ENSG00000204611, ZNF616, zinc finger protein 616, [Score=77.8, Expect=1e-17]; ENSG00000167840, ZNF232, zinc finger protein 232, [Score=75.9, Expect=4e-17]; ENSG00000269067, ZNF728, zinc finger protein 728, [Score=75.1, Expect=8e-17]} {Mouse: ENSMUSG00000020420, Zfp607a, zinc finger protein 607A, [Score=80.5, Expect=8e-19]} {Dmel: FBgn0027339, jim, [Score=69.7, Expect=3e-15]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=65.5, Expect=3e-14]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [Score=63.5, Expect=2e-13]} {RNA1509_23728} {RNA1310_37967} {RNA815_4812} Mlig455_067611 {REF} {Length: 2566} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=107.3]; C2H2-type zinc finger [PF13894.8, score=90.9]; Zinc-finger double domain [PF13465.8, score=54.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=32.3]; C2H2-type zinc finger [PF13912.8, score=30.3]; Zinc-finger of C2H2 type [PF12874.9, score=28.7]} {Human: ENSG00000198521, ZNF43, zinc finger protein 43, [Score=166, Expect=2e-43]; ENSG00000204611, ZNF616, zinc finger protein 616, [Score=163, Expect=2e-42]; ENSG00000196350, ZNF729, zinc finger protein 729, [Score=160, Expect=3e-41]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=158, Expect=4e-41]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=185, Expect=9e-51]} {Dmel: FBgn0020309, crol, crooked legs, [Score=122, Expect=4e-29]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=86.7, Expect=9e-18]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=84.3, Expect=6e-17]} {RNA1509_12067, RNA1509_15772, RNA1509_23728} {RNA1310_17539, RNA1509_12067, RNA1509_23728} {RNA1509_12067, RNA1509_23728, RNA815_4812} |
| 10. | MligTC455_18853 | 111 | 2.31 | Mlig455_003980 | Neo: - Age: Down-Down-Down Region-enriched R5: 2.394/0.01639 |
MRPL45 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_003980 {REF} {Length: 1097} {TRANSSPLICED} {Human: ENSG00000278845, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]; ENSG00000277936, MRPL45, mitochondrial ribosomal protein L45, [RH, Score=62.0, Expect=2e-10]} {Mouse: ENSMUSG00000018882, Mrpl45, mitochondrial ribosomal protein L45, [RH, Score=57.8, Expect=4e-09]} {Dmel: FBgn0263863, mRpL45, mitochondrial ribosomal protein L45, [RH, Score=73.9, Expect=1e-14]} {Celegans: WBGene00022493, mrpl-45, Probable 39S ribosomal protein L45, mitochondrial, [RH, Score=75.1, Expect=3e-15]} {Smed: dd_Smed_v6_2740_0_1, dd_Smed_v6_2740_0_1, [RH, Score=64.3, Expect=8e-12]} {RNA1509_6788} {RNA1310_30839} {RNA815_14208} |
| 11. | MligTC455_17508 | 998 | 20.79 | Mlig455_001150 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.276 |
0.951 | - | - | 0.951 | - | - | - | Mlig455_001150 {REF} {Length: 4283} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=31.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=28.2]} {RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568} {RNA1310_307.1, RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568} {RNA1509_14866, RNA1509_2665, RNA1509_37745, RNA1509_59568, RNA815_845} |
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