Data search
Results for MligTC455_17627
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17627 | 179 | 3.73 | Mlig455_003330 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.369/0.04347 |
POLR3D | Mlig455_003330 {REF} {Length: 2781} {TRANSSPLICED} {Pfam: RNA polymerase III RPC4 [PF05132.16, score=39.1]} {Human: ENSG00000168495, POLR3D, RNA polymerase III subunit D, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000000776, Polr3d, polymerase (RNA) III (DNA directed) polypeptide D, [RH, Score=57.8, Expect=1e-08]} {RNA1509_20639} {RNA1310_15920} {RNA815_16517} |
Cumulative graph for MligTC455_17627
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -3.316 | 2.4 | 0.08363 | 0.63055 | |
| RegionR2 | 3.369 | 2.4 | 0.00274 | 0.04347 | |
| RegionR3 | 0.431 | 2.4 | 0.51906 | 1.00000 | |
| RegionR4 | -3.466 | 2.4 | 0.00210 | 0.01851 | |
| RegionR5 | 0.013 | 2.4 | 0.89771 | 1.00000 | |
| RegionR6 | -0.042 | 2.4 | 0.98804 | 1.00000 | |
| RegionR7 | 0.604 | 2.4 | 0.48528 | 1.00000 | |
| RegionR8 | 2.407 | 2.4 | 0.02342 | 0.29820 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 2.015 | 2.4 | 0.95081 | 1.00000 | |
| RegenerationR2 | 0.686 | 2.4 | 0.46743 | 0.85668 | |
| RegenerationR3 | 3.277 | 2.4 | 0.00536 | 0.13197 | |
| RegenerationR4 | 1.955 | 2.4 | 0.09555 | 0.48045 | |
| RegenerationR5 | 2.19 | 2.4 | 0.01929 | 0.24033 | |
| RegenerationR6 | 1.695 | 2.4 | 0.22590 | 0.57128 | |
| RegenerationBL | 1.564 | 2.4 | 0.32824 | 0.69466 | |
| RegenerationTP | 1.511 | 2.4 | 0.21692 | 0.65991 |
Genes with expression patterns similar to MligTC455_17627
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17627 | 179 | 3.73 | Mlig455_003330 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.369/0.04347 |
POLR3D | 4 | 1.000 | 1.000 | - | - | 1.000 | 1.000 | Mlig455_003330 {REF} {Length: 2781} {TRANSSPLICED} {Pfam: RNA polymerase III RPC4 [PF05132.16, score=39.1]} {Human: ENSG00000168495, POLR3D, RNA polymerase III subunit D, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000000776, Polr3d, polymerase (RNA) III (DNA directed) polypeptide D, [RH, Score=57.8, Expect=1e-08]} {RNA1509_20639} {RNA1310_15920} {RNA815_16517} |
| 2. | MligTC455_17626 | 273 | 5.68 | Mlig455_003240 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.277 |
POLR3D | 3.801 | 0.974 | 0.979 | - | - | 0.943 | 0.905 | Mlig455_003240 {REF} {Length: 2831} {TRANSSPLICED} {Pfam: RNA polymerase III RPC4 [PF05132.16, score=38.0]} {Human: ENSG00000168495, POLR3D, RNA polymerase III subunit D, [Score=56.6, Expect=4e-08]} {Mouse: ENSMUSG00000000776, Polr3d, polymerase (RNA) III (DNA directed) polypeptide D, [RH, Score=58.5, Expect=7e-09]} {Dmel: FBgn0036775, CG5147, [Score=48.9, Expect=6e-06]} {RNA1509_20639} {RNA1310_15920, RNA1509_20639} {RNA1509_20639, RNA815_16517} |
| 3. | MligTC455_25957 | 248 | 5.16 | Mlig455_023208 | Neo: Irradiation Age: - Region-enriched R5: 2.061/0.02250 |
1.785 | 0.804 | - | - | - | - | 0.981 | Mlig455_023208 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_12875} {RNA1310_28674, RNA1509_12875} {RNA1509_12875, RNA815_11740} | |
| 4. | MligTC455_49757 | 748 | 15.58 | Mlig455_049332, Mlig455_049406 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.402 Region-enriched R4: 1.305/0.04332 |
SAMM50 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_049332 {REF} {Length: 6446} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=92.5]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [RH, Score=219, Expect=2e-65]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [RH, Score=219, Expect=2e-65]} {Dmel: FBgn0033989, CG7639, [RH, Score=113, Expect=5e-27]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [RH, Score=166, Expect=5e-46]} {RNA1509_11061} {RNA1310_15228, RNA1509_11061} {RNA1509_11061, RNA815_7353} Mlig455_049406 {REF} {Length: 4604} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=122.5]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [RH, Score=218, Expect=6e-63]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [RH, Score=218, Expect=4e-63]} {Dmel: FBgn0033989, CG7639, [RH, Score=113, Expect=2e-26]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [RH, Score=165, Expect=2e-44]} {RNA1509_11061, RNA1509_15186} {RNA1310_15228, RNA1509_15186} {RNA1509_15186, RNA815_7353} |
| 5. | MligTC455_09626 | 272 | 5.66 | Mlig455_026162 | Neo: - Age: - |
0.959 | - | - | - | - | - | 0.959 | Mlig455_026162 {REF} {Length: 2431} {TRANSSPLICED} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=105.0]} {Celegans: WBGene00019763, galt-1, Beta-1,4-galactosyltransferase galt-1, [RH, Score=103, Expect=8e-24]} {Smed: dd_Smed_v6_12154_0_1, dd_Smed_v6_12154_0_1, [RH, Score=214, Expect=8e-65]} {RNA1509_16641, RNA1509_37951} {RNA1310_21332, RNA1509_37951} {RNA1509_37951, RNA815_8309} | |
| 6. | MligTC455_49758 | 375 | 7.81 | Mlig455_049407 | Neo: - Age: - Region-enriched R5: 1.251/0.00982 |
SAMM50 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_049407 {REF} {Length: 1566} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=19.7]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [Score=61.6, Expect=1e-11]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [Score=60.1, Expect=2e-11]} {RNA1509_11061} {RNA1310_15228} {RNA815_28517} |
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