Data search
Results for MligTC455_25957
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_25957 | 248 | 5.16 | Mlig455_023208 | Neo: Irradiation Age: - Region-enriched R5: 2.061/0.02250 |
Mlig455_023208 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_12875} {RNA1310_28674, RNA1509_12875} {RNA1509_12875, RNA815_11740} |
Cumulative graph for MligTC455_25957
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.722 | 2.994 | 0.33383 | 0.98005 | |
| RegionR2 | -0.514 | 2.994 | 0.95804 | 1.00000 | |
| RegionR3 | 0.152 | 2.994 | 0.79662 | 1.00000 | |
| RegionR4 | 2.4 | 2.994 | 0.01411 | 0.07886 | |
| RegionR5 | 2.061 | 2.994 | 0.00281 | 0.02250 | |
| RegionR6 | 0.448 | 2.994 | 0.63483 | 1.00000 | |
| RegionR7 | 0.255 | 2.994 | 0.76199 | 1.00000 | |
| RegionR8 | -0.078 | 2.994 | 0.88493 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.539 | 2.994 | 0.99997 | 1.00000 | |
| RegenerationR2 | 0.349 | 2.994 | 0.58657 | 0.90921 | |
| RegenerationR3 | 0.05 | 2.994 | 0.94647 | 1.00000 | |
| RegenerationR4 | -0.809 | 2.994 | 0.27934 | 0.72477 | |
| RegenerationR5 | 0.009 | 2.994 | 0.99492 | 1.00000 | |
| RegenerationR6 | -0.302 | 2.994 | 0.66942 | 0.90829 | |
| RegenerationBL | 0.726 | 2.994 | 0.37326 | 0.74153 | |
| RegenerationTP | -0.475 | 2.994 | 0.63670 | 0.98158 |
Genes with expression patterns similar to MligTC455_25957
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_25957 | 248 | 5.16 | Mlig455_023208 | Neo: Irradiation Age: - Region-enriched R5: 2.061/0.02250 |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_023208 {REF} {Length: 1250} {NoTransDecoderORF} {RNA1509_12875} {RNA1310_28674, RNA1509_12875} {RNA1509_12875, RNA815_11740} | |
| 2. | MligTC455_03811 | 137 | 2.86 | Mlig455_059752 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.549 Region-enriched R5: 2.817/0.03538 Regeneration-upregulated BL: 5.746 Regeneration-enriched BL: 5.746 |
1.786 | 0.815 | - | - | - | - | 0.971 | Mlig455_059752 {REF} {Length: 1765} {TRANSSPLICED} {Pfam: Basic region leucine zipper [PF07716.17, score=20.9]} {RNA1509_23883} {RNA1310_27272} {RNA815_26918} | |
| 3. | MligTC455_17627 | 179 | 3.73 | Mlig455_003330 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.369/0.04347 |
POLR3D | 1.785 | 0.804 | - | - | - | - | 0.981 | Mlig455_003330 {REF} {Length: 2781} {TRANSSPLICED} {Pfam: RNA polymerase III RPC4 [PF05132.16, score=39.1]} {Human: ENSG00000168495, POLR3D, RNA polymerase III subunit D, [Score=56.2, Expect=5e-08]} {Mouse: ENSMUSG00000000776, Polr3d, polymerase (RNA) III (DNA directed) polypeptide D, [RH, Score=57.8, Expect=1e-08]} {RNA1509_20639} {RNA1310_15920} {RNA815_16517} |
| 4. | MligTC455_42306 | 864 | 18 | Mlig455_020699, Mlig455_020767 | Neo: - Age: - |
1.711 | - | 0.745 | - | - | - | 0.966 | Mlig455_020699 {REF} {Length: 1825} {TRANSSPLICED} {RNA1509_29217, RNA1509_45221, RNA1509_49303} {RNA1310_16148.1, RNA1509_29217, RNA1509_45221, RNA1509_49303} {RNA1509_29217, RNA1509_45221, RNA1509_49303, RNA815_19582} Mlig455_020767 {REF} {Length: 1819} {TRANSSPLICED} {RNA1509_45221} {RNA1310_16148.1} {RNA815_19582} |
|
| 5. | MligTC455_49757 | 748 | 15.58 | Mlig455_049332, Mlig455_049406 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.402 Region-enriched R4: 1.305/0.04332 |
SAMM50 | 0.97 | - | - | - | - | - | 0.970 | Mlig455_049332 {REF} {Length: 6446} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=92.5]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [RH, Score=219, Expect=2e-65]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [RH, Score=219, Expect=2e-65]} {Dmel: FBgn0033989, CG7639, [RH, Score=113, Expect=5e-27]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [RH, Score=166, Expect=5e-46]} {RNA1509_11061} {RNA1310_15228, RNA1509_11061} {RNA1509_11061, RNA815_7353} Mlig455_049406 {REF} {Length: 4604} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=122.5]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [RH, Score=218, Expect=6e-63]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [RH, Score=218, Expect=4e-63]} {Dmel: FBgn0033989, CG7639, [RH, Score=113, Expect=2e-26]} {Smed: dd_Smed_v6_4146_0_1, dd_Smed_v6_4146_0_1, [RH, Score=165, Expect=2e-44]} {RNA1509_11061, RNA1509_15186} {RNA1310_15228, RNA1509_15186} {RNA1509_15186, RNA815_7353} |
| 6. | MligTC455_21046 | 472 | 9.84 | Mlig455_012022 | Neo: Irradiation Age: Down-Up-Down Region-enriched R5: 1.897/0.00007 |
TMEM41B | 0.961 | - | - | - | - | - | 0.961 | Mlig455_012022 {REF} {Length: 3884} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF758) [PF05527.13, score=161.1]; SNARE associated Golgi protein [PF09335.13, score=60.4]; Tetratricopeptide repeat [PF00515.30, score=57.8]; Tetratricopeptide repeat [PF07719.19, score=51.7]; TPR repeat [PF13414.8, score=49.5]; Potential Monad-binding region of RPAP3 [PF13877.8, score=40.2]; Tetratricopeptide repeat [PF13181.8, score=37.5]; Tetratricopeptide repeat [PF13371.8, score=29.8]; Tetratricopeptide repeat [PF13432.8, score=24.4]; Tetratricopeptide repeat [PF13428.8, score=24.0]; Tetratricopeptide repeat [PF14559.8, score=22.1]; Tetratricopeptide repeat [PF13174.8, score=19.8]; Tetratricopeptide repeat [PF13431.8, score=19.0]} {Human: ENSG00000166471, TMEM41B, transmembrane protein 41B, [Score=248, Expect=1e-74]} {Mouse: ENSMUSG00000047554, Tmem41b, transmembrane protein 41B, [Score=256, Expect=9e-78]} {Dmel: FBgn0030850, stas, Stasimon, [Score=210, Expect=7e-61]} {Celegans: WBGene00006520, tag-175, Transmembrane protein 41 homolog, [Score=202, Expect=8e-59]} {Smed: dd_Smed_v6_9137_0_1, dd_Smed_v6_9137_0_1, [RH, Score=150, Expect=4e-39]} {RNA1509_27663} {RNA1310_19235} {RNA815_13394} |
| 7. | MligTC455_49758 | 375 | 7.81 | Mlig455_049407 | Neo: - Age: - Region-enriched R5: 1.251/0.00982 |
SAMM50 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_049407 {REF} {Length: 1566} {TRANSSPLICED} {Pfam: Omp85 superfamily domain [PF01103.25, score=19.7]} {Human: ENSG00000100347, SAMM50, SAMM50 sorting and assembly machinery component, [Score=61.6, Expect=1e-11]} {Mouse: ENSMUSG00000022437, Samm50, SAMM50 sorting and assembly machinery component, [Score=60.1, Expect=2e-11]} {RNA1509_11061} {RNA1310_15228} {RNA815_28517} |
| 8. | MligTC455_20491 | 262 | 5.45 | Mlig455_001578 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.722/0.00001 |
OVOL1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_001578 {REF} {Length: 5394} {Pfam: Zinc-finger double domain [PF13465.8, score=40.6]; Zinc finger, C2H2 type [PF00096.28, score=36.4]; C2H2-type zinc finger [PF13894.8, score=26.9]; C2H2-type zinc finger [PF13912.8, score=19.6]} {Human: ENSG00000172818, OVOL1, ovo like transcriptional repressor 1, [RH, Score=183, Expect=3e-54]; ENSG00000125850, OVOL2, ovo like zinc finger 2, [RH, Score=177, Expect=9e-52]} {Mouse: ENSMUSG00000037279, Ovol2, ovo like zinc finger 2, [RH, Score=180, Expect=4e-53]; ENSMUSG00000024922, Ovol1, ovo like zinc finger 1, [RH, Score=176, Expect=8e-52]} {Dmel: FBgn0003028, ovo, [RH, Score=201, Expect=5e-56]} {Celegans: WBGene00003033, lin-48, Putative zinc finger transcription factor, [RH, Score=195, Expect=4e-59]} {Smed: dd_Smed_v6_12010_0_1, dd_Smed_v6_12010_0_1, [RH, Score=179, Expect=2e-53]} {RNA1509_24345, RNA1509_41396, RNA1509_48452} {RNA1310_10860.1, RNA1509_41396, RNA1509_48452} {RNA1509_41396, RNA1509_48452, RNA815_21019} |
| 9. | MligTC455_49366 | 486 | 10.13 | Mlig455_023586, Mlig455_050166 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.530 Region-enriched R5: 1.681/0.03689 |
NCBP3 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_023586 {REF} {Length: 3671} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=59.9]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_39208, RNA1509_50478, RNA1509_6697} {RNA1310_4269, RNA1509_39208, RNA1509_50478} {RNA1509_39208, RNA1509_50478, RNA815_8318} Mlig455_050166 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=59.9]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [RH, Score=100, Expect=3e-21]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_50478} {RNA1310_4269} {RNA815_8318} |
| 10. | MligTC455_49890 | 261 | 5.44 | Mlig455_015855 | Neo: - Age: - |
SLC44A1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_015855 {REF} {Length: 5232} {TRANSSPLICED} {Pfam: Plasma-membrane choline transporter [PF04515.14, score=199.0]} {Human: ENSG00000070214, SLC44A1, solute carrier family 44 member 1, [RH, Score=261, Expect=3e-76]} {Mouse: ENSMUSG00000028412, Slc44a1, solute carrier family 44, member 1, [RH, Score=265, Expect=9e-78]} {Dmel: FBgn0035523, Ctl1, Choline transporter-like 1, [RH, Score=260, Expect=6e-76]} {Celegans: WBGene00018037, chtl-1, Choline transporter-like protein 1, [Score=115, Expect=2e-26]} {Smed: dd_Smed_v6_4049_0_1, dd_Smed_v6_4049_0_1, [RH, Score=281, Expect=5e-84]} {RNA1509_16805, RNA1509_40153} {RNA1310_5849, RNA1509_16805, RNA1509_40153} {RNA1509_16805, RNA1509_40153, RNA815_2956.1} |