Data search
Results for MligTC455_17641
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17641 | 1996 | 41.57 | Mlig455_003375 | Neo: - Age: Down-Up-Down |
Mlig455_003375 {REF} {Length: 530} {TRANSSPLICED} {RNA1509_17017, RNA1509_25779, RNA1509_27040, RNA1509_28317, RNA1509_28868, RNA1509_8171} {RNA1310_49833.1, RNA1509_17017, RNA1509_25779, RNA1509_27040, RNA1509_28317, RNA1509_28868, RNA1509_8171} {RNA1509_17017, RNA1509_25779, RNA1509_27040, RNA1509_28317, RNA1509_28868, RNA1509_8171, RNA815_34949} |
Cumulative graph for MligTC455_17641
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.426 | 5.607 | 0.04505 | 0.50874 | |
| RegionR2 | -0.256 | 5.607 | 0.51607 | 0.89198 | |
| RegionR3 | 0.282 | 5.607 | 0.38618 | 0.91794 | |
| RegionR4 | 0.362 | 5.607 | 0.32217 | 0.63926 | |
| RegionR5 | 0.791 | 5.607 | 0.00858 | 0.05163 | |
| RegionR6 | 0.323 | 5.607 | 0.32587 | 0.91379 | |
| RegionR7 | 0.438 | 5.607 | 0.19252 | 0.79766 | |
| RegionR8 | -0.514 | 5.607 | 0.21978 | 0.82727 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -8.166 | 5.607 | 0.01170 | 0.47032 | |
| RegenerationR2 | -0.091 | 5.607 | 0.81618 | 0.99442 | |
| RegenerationR3 | -0.031 | 5.607 | 0.93819 | 1.00000 | |
| RegenerationR4 | 0.14 | 5.607 | 0.73158 | 0.96482 | |
| RegenerationR5 | -0.13 | 5.607 | 0.73893 | 0.96811 | |
| RegenerationR6 | -0.488 | 5.607 | 0.23234 | 0.57922 | |
| RegenerationBL | -1.141 | 5.607 | 0.00964 | 0.09858 | |
| RegenerationTP | -0.423 | 5.607 | 0.33306 | 0.77711 |
Genes with expression patterns similar to MligTC455_17641
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17641 | 1996 | 41.57 | Mlig455_003375 | Neo: - Age: Down-Up-Down |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_003375 {REF} {Length: 530} {TRANSSPLICED} {RNA1509_17017, RNA1509_25779, RNA1509_27040, RNA1509_28317, RNA1509_28868, RNA1509_8171} {RNA1310_49833.1, RNA1509_17017, RNA1509_25779, RNA1509_27040, RNA1509_28317, RNA1509_28868, RNA1509_8171} {RNA1509_17017, RNA1509_25779, RNA1509_27040, RNA1509_28317, RNA1509_28868, RNA1509_8171, RNA815_34949} | |
| 2. | MligTC455_53061 | 732 | 15.26 | Mlig455_068243 | Neo: - Age: - Region-enriched R3: 1.306/0.01915 |
SPTLC2 | 0.966 | - | - | - | 0.966 | - | - | Mlig455_068243 {REF} {Length: 3365} {TRANSSPLICED} {Pfam: Aminotransferase class I and II [PF00155.23, score=168.0]; Beta-eliminating lyase [PF01212.23, score=19.8]} {Human: ENSG00000100596, SPTLC2, serine palmitoyltransferase long chain base subunit 2, [RH, Score=596, Expect=0.0]; ENSG00000172296, SPTLC3, serine palmitoyltransferase long chain base subunit 3, [RH, Score=569, Expect=0.0]} {Mouse: ENSMUSG00000021036, Sptlc2, serine palmitoyltransferase, long chain base subunit 2, [RH, Score=602, Expect=0.0]} {Dmel: FBgn0002524, lace, [RH, Score=502, Expect=3e-173]} {Celegans: WBGene00018398, sptl-2, Serine palmitoyltransferase 2, [RH, Score=508, Expect=1e-175]} {Smed: dd_Smed_v6_4337_0_1, dd_Smed_v6_4337_0_1, [RH, Score=617, Expect=0.0]} {RNA1509_16682, RNA1509_20535} {RNA1310_11412.1, RNA1509_16682, RNA1509_20535} {RNA1509_16682, RNA1509_20535, RNA815_4113} |
| 3. | MligTC455_42916 | 684 | 14.24 | Mlig455_034843 | Neo: - Age: - Region-enriched R5: 2.026/0.00020 |
COX19 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_034843 {REF} {Length: 508} {TRANSSPLICED} {Pfam: CHCH domain [PF06747.15, score=32.5]; CHCH-CHCH-like Cx9C, IMS import disulfide relay-system, [PF16860.7, score=21.6]; Cytochrome c oxidase assembly protein PET191 [PF10203.11, score=20.5]; NADH-ubiquinone oxidoreductase B18 subunit (NDUFB7) [PF05676.15, score=19.0]} {Human: ENSG00000240230, COX19, cytochrome c oxidase assembly factor COX19, [RH, Score=85.9, Expect=4e-23]} {Mouse: ENSMUSG00000045438, Cox19, cytochrome c oxidase assembly protein 19, [RH, Score=81.3, Expect=2e-21]} {Dmel: FBgn0260222, CG42496, [RH, Score=75.9, Expect=1e-19]} {Celegans: WBGene00009745, F45H11.5, [RH, Score=75.9, Expect=1e-19]} {Smed: dd_Smed_v6_2404_0_1, dd_Smed_v6_2404_0_1, [RH, Score=79.3, Expect=3e-21]} {RNA1509_11007} {RNA1310_64150.1} {RNA815_34075} |
| 4. | MligTC455_20656 | 2458 | 51.2 | Mlig455_036375, Mlig455_036409, Mlig455_054581 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.237 Region-enriched R2: 1.243/0.02511 Regeneration-enriched R1: 4.132 |
GNL3L | 0.956 | - | - | - | - | - | 0.956 | Mlig455_036375 {REF} {Length: 2494} {Pfam: GNL3L/Grn1 putative GTPase [PF08701.13, score=67.0]; 50S ribosome-binding GTPase [PF01926.25, score=55.4]; Ferrous iron transport protein B [PF02421.20, score=29.7]; Double-GTPase 2 [PF19993.1, score=27.0]; Dynamin family [PF00350.25, score=24.4]} {Human: ENSG00000130119, GNL3L, G protein nucleolar 3 like, [RH, Score=288, Expect=5e-89]; ENSG00000163938, GNL3, G protein nucleolar 3, [RH, Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [RH, Score=285, Expect=4e-88]} {Dmel: FBgn0038473, Ns1, Nucleostemin 1, [RH, Score=323, Expect=2e-102]} {Celegans: WBGene00003821, nst-1, Guanine nucleotide-binding protein-like 3 homolog, [RH, Score=367, Expect=4e-120]} {Smed: dd_Smed_v6_676_0_1, dd_Smed_v6_676_0_1, [RH, Score=272, Expect=9e-85]} {RNA1509_11558, RNA1509_15875, RNA1509_23651, RNA1509_3071} {RNA1310_14327, RNA1509_11558, RNA1509_15875, RNA1509_23651} {RNA1509_11558, RNA1509_15875, RNA1509_23651, RNA815_5246} Mlig455_036409 {REF} {Length: 2340} {Pfam: GNL3L/Grn1 putative GTPase [PF08701.13, score=68.6]; 50S ribosome-binding GTPase [PF01926.25, score=48.3]; Ferrous iron transport protein B [PF02421.20, score=25.5]; Dynamin family [PF00350.25, score=20.3]} {Human: ENSG00000130119, GNL3L, G protein nucleolar 3 like, [Score=203, Expect=1e-57]; ENSG00000163938, GNL3, G protein nucleolar 3, [Score=197, Expect=1e-55]} {Mouse: ENSMUSG00000042354, Gnl3, guanine nucleotide binding protein-like 3 (nucleolar), [Score=206, Expect=6e-59]; ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [Score=204, Expect=5e-58]} {Dmel: FBgn0038473, Ns1, Nucleostemin 1, [Score=242, Expect=2e-72]} {Celegans: WBGene00003821, nst-1, Guanine nucleotide-binding protein-like 3 homolog, [Score=293, Expect=4e-92]} {Smed: dd_Smed_v6_676_0_1, dd_Smed_v6_676_0_1, [Score=214, Expect=5e-63]} {RNA1509_11558} {RNA1310_14327} {RNA815_5246} Mlig455_054581 {REF} {Length: 2574} {Pfam: GNL3L/Grn1 putative GTPase [PF08701.13, score=67.0]; 50S ribosome-binding GTPase [PF01926.25, score=55.4]; Ferrous iron transport protein B [PF02421.20, score=29.7]; Double-GTPase 2 [PF19993.1, score=27.0]; Dynamin family [PF00350.25, score=24.4]} {Human: ENSG00000130119, GNL3L, G protein nucleolar 3 like, [RH, Score=288, Expect=5e-89]; ENSG00000163938, GNL3, G protein nucleolar 3, [RH, Score=281, Expect=1e-86]} {Mouse: ENSMUSG00000025266, Gnl3l, guanine nucleotide binding protein-like 3 (nucleolar)-like, [RH, Score=285, Expect=4e-88]} {Dmel: FBgn0038473, Ns1, Nucleostemin 1, [RH, Score=323, Expect=2e-102]} {Celegans: WBGene00003821, nst-1, Guanine nucleotide-binding protein-like 3 homolog, [RH, Score=367, Expect=4e-120]} {Smed: dd_Smed_v6_676_0_1, dd_Smed_v6_676_0_1, [RH, Score=272, Expect=9e-85]} {RNA1509_3071} {RNA1310_14327, RNA1509_3071} {RNA1509_3071, RNA815_5246} |
| 5. | MligTC455_51345 | 1637 | 34.11 | Mlig455_062128 | Neo: - Age: Down-Up-Down |
PRDX5 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_062128 {REF} {Length: 2414} {TRANSSPLICED} {Pfam: Redoxin [PF08534.12, score=108.5]; AhpC/TSA family [PF00578.23, score=44.1]} {Human: ENSG00000126432, PRDX5, peroxiredoxin 5, [Score=132, Expect=8e-39]} {Mouse: ENSMUSG00000024953, Prdx5, peroxiredoxin 5, [Score=123, Expect=2e-35]} {Dmel: FBgn0038570, Prx5, Peroxiredoxin 5, [Score=139, Expect=4e-42]} {Smed: dd_Smed_v6_1290_0_1, dd_Smed_v6_1290_0_1, [Score=157, Expect=2e-49]} {RNA1509_12993, RNA1509_12998, RNA1509_15064, RNA1509_15980, RNA1509_20667, RNA1509_4959} {RNA1310_37609, RNA1509_12993, RNA1509_12998, RNA1509_15064, RNA1509_15980, RNA1509_20667, RNA1509_4959} {RNA1509_12993, RNA1509_12998, RNA1509_15064, RNA1509_15980, RNA1509_20667, RNA1509_4959, RNA815_25605} |