Data search
Results for MligTC455_17673
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_17673 | 685 | 14.27 | Mlig455_002365 | Neo: - Age: - Region-enriched R4: 2.083/0.00001 |
GLRA3 | Mlig455_002365 {REF} {Length: 3426} {Pfam: Malate/L-lactate dehydrogenase [PF02615.16, score=348.8]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=148.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.2]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=257, Expect=1e-76]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=254, Expect=6e-76]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=254, Expect=1e-75]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=252, Expect=7e-75]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=257, Expect=9e-77]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=252, Expect=5e-75]} {Dmel: FBgn0037057, CG10512, [Score=334, Expect=2e-107]} {Celegans: WBGene00012149, VF13D12L.3, [Score=351, Expect=2e-113]} {Smed: dd_Smed_v6_3440_0_2, dd_Smed_v6_3440_0_2, [Score=351, Expect=8e-114]} {RNA1509_40602} {RNA1310_17891} {RNA815_5963.1} |
Cumulative graph for MligTC455_17673
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.398 | 4.161 | 0.72221 | 1.00000 | |
| RegionR2 | -1.091 | 4.161 | 0.09380 | 0.37564 | |
| RegionR3 | 0.244 | 4.161 | 0.58745 | 1.00000 | |
| RegionR4 | 2.083 | 4.161 | 0.00000 | 0.00001 | |
| RegionR5 | 1.707 | 4.161 | 0.00000 | 0.00006 | |
| RegionR6 | 1.076 | 4.161 | 0.01208 | 0.18906 | |
| RegionR7 | 0.143 | 4.161 | 0.79705 | 1.00000 | |
| RegionR8 | -3.764 | 4.161 | 0.00205 | 0.07618 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.226 | 4.161 | 0.45367 | 1.00000 | |
| RegenerationR2 | 1.155 | 4.161 | 0.00583 | 0.12186 | |
| RegenerationR3 | 0.756 | 4.161 | 0.06051 | 0.41879 | |
| RegenerationR4 | -0.32 | 4.161 | 0.39090 | 0.80783 | |
| RegenerationR5 | 0.29 | 4.161 | 0.37576 | 0.78431 | |
| RegenerationR6 | 0.423 | 4.161 | 0.27171 | 0.62186 | |
| RegenerationBL | 1.504 | 4.161 | 0.02047 | 0.15509 | |
| RegenerationTP | 1.709 | 4.161 | 0.05418 | 0.38020 |
Genes with expression patterns similar to MligTC455_17673
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_17673 | 685 | 14.27 | Mlig455_002365 | Neo: - Age: - Region-enriched R4: 2.083/0.00001 |
GLRA3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_002365 {REF} {Length: 3426} {Pfam: Malate/L-lactate dehydrogenase [PF02615.16, score=348.8]; Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=148.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=92.2]} {Human: ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=257, Expect=1e-76]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=254, Expect=6e-76]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=254, Expect=1e-75]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=252, Expect=7e-75]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=257, Expect=9e-77]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=254, Expect=1e-75]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=252, Expect=5e-75]} {Dmel: FBgn0037057, CG10512, [Score=334, Expect=2e-107]} {Celegans: WBGene00012149, VF13D12L.3, [Score=351, Expect=2e-113]} {Smed: dd_Smed_v6_3440_0_2, dd_Smed_v6_3440_0_2, [Score=351, Expect=8e-114]} {RNA1509_40602} {RNA1310_17891} {RNA815_5963.1} |
| 2. | MligTC455_21048 | 2324 | 48.42 | Mlig455_022276 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 1.193 Regeneration-enriched BL: 1.193 |
EIF3B | 1.779 | - | - | - | 0.972 | - | 0.807 | Mlig455_022276 {REF} {Length: 3069} {Pfam: Eukaryotic translation initiation factor eIF2A [PF08662.13, score=178.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=21.6]} {Human: ENSG00000106263, EIF3B, eukaryotic translation initiation factor 3 subunit B, [RH, Score=668, Expect=0.0]} {Mouse: ENSMUSG00000056076, Eif3b, eukaryotic translation initiation factor 3, subunit B, [RH, Score=665, Expect=0.0]} {Dmel: FBgn0034237, eIF3b, eukaryotic translation initiation factor 3 subunit b, [RH, Score=542, Expect=0.0]} {Celegans: WBGene00001225, eif-3.B, Eukaryotic translation initiation factor 3 subunit B, [RH, Score=372, Expect=7e-119]} {Smed: dd_Smed_v6_2302_0_1, dd_Smed_v6_2302_0_1, [RH, Score=402, Expect=2e-131]} {RNA1509_1241, RNA1509_21865, RNA1509_31279} {RNA1310_3419.2, RNA1509_1241, RNA1509_21865, RNA1509_31279} {RNA1509_1241, RNA1509_21865, RNA1509_31279, RNA815_682.1} |
| 3. | MligTC455_23247 | 4480 | 93.33 | Mlig455_008739, Mlig455_008755 | Neo: Neoblast Age: Down-Up-Up Region-enriched R4: 1.709/0.00000 Regeneration-upregulated BL: 1.449 Regeneration-enriched BL: 1.449 |
ELOF1 | 1.757 | - | - | - | 0.951 | - | 0.806 | Mlig455_008739 {REF} {Length: 720} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.1]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=107, Expect=1e-31]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=106, Expect=1e-31]} {Dmel: FBgn0063670, CG40228, [RH, Score=139, Expect=7e-45]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=140, Expect=1e-45]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_9049} {RNA1310_49008} {RNA815_24658} Mlig455_008755 {REF} {Length: 720} {TRANSSPLICED} {Pfam: Transcription elongation factor Elf1 like [PF05129.15, score=104.1]} {Human: ENSG00000130165, ELOF1, elongation factor 1 homolog, [RH, Score=107, Expect=1e-31]} {Mouse: ENSMUSG00000013822, Elof1, ELF1 homolog, elongation factor 1, [RH, Score=106, Expect=1e-31]} {Dmel: FBgn0063670, CG40228, [RH, Score=139, Expect=7e-45]} {Celegans: WBGene00013219, Y54G11A.11, Transcription elongation factor 1 homolog, [RH, Score=140, Expect=1e-45]} {Smed: dd_Smed_v6_3505_0_1, dd_Smed_v6_3505_0_1, [RH, Score=122, Expect=2e-38]} {RNA1509_10357, RNA1509_28357, RNA1509_29871, RNA1509_9049} {RNA1310_49008, RNA1509_10357, RNA1509_28357, RNA1509_29871, RNA1509_9049} {RNA1509_10357, RNA1509_28357, RNA1509_29871, RNA1509_9049, RNA815_24658} |
| 4. | MligTC455_20451 | 333 | 6.94 | Mlig455_011920, Mlig455_011930 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 3.177/0.00070 |
1.732 | - | - | - | - | 0.960 | 0.772 | Mlig455_011920 {REF} {Length: 1628} {TRANSSPLICED} {RNA1509_60017} {RNA1310_31646} {RNA815_14776.2} Mlig455_011930 {REF} {Length: 624} {NoTransDecoderORF} {RNA1509_60017} {RNA1310_59589} {RNA815_14776.2} |
|
| 5. | MligTC455_52368 | 1098 | 22.88 | Mlig455_051545 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.466/0.00013 |
TRMT12 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_051545 {REF} {Length: 1953} {Pfam: Met-10+ like-protein [PF02475.18, score=78.7]; Methyltransferase domain [PF13649.8, score=27.2]; Methyltransferase small domain [PF05175.16, score=21.0]; Methyltransferase domain [PF08241.14, score=20.8]} {Human: ENSG00000183665, TRMT12, tRNA methyltransferase 12 homolog, [RH, Score=173, Expect=3e-47]} {Mouse: ENSMUSG00000037085, Trmt12, tRNA methyltranferase 12, [RH, Score=172, Expect=5e-47]} {Celegans: WBGene00009586, F40F9.10, [RH, Score=125, Expect=8e-31]} {Smed: dd_Smed_v6_8323_0_1, dd_Smed_v6_8323_0_1, [RH, Score=150, Expect=1e-40]} {RNA1509_9186} {RNA1310_24249} {RNA815_28668} |
| 6. | MligTC455_42271 | 1246 | 25.97 | Mlig455_008840, Mlig455_008941 | Neo: - Age: - Region-enriched R5: 1.156/0.02438 |
PGPEP1 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_008840 {REF} {Length: 2675} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.7]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=102, Expect=2e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=2e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=82.8, Expect=1e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=87.4, Expect=2e-21]} {RNA1509_47016} {RNA1310_22856} {RNA815_10452} Mlig455_008941 {REF} {Length: 2548} {TRANSSPLICED} {Pfam: Pyroglutamyl peptidase [PF01470.19, score=60.9]} {Human: ENSG00000130517, PGPEP1, pyroglutamyl-peptidase I, [RH, Score=101, Expect=4e-26]} {Mouse: ENSMUSG00000056204, Pgpep1, pyroglutamyl-peptidase I, [RH, Score=100, Expect=5e-26]} {Celegans: WBGene00010858, M04C9.3, [RH, Score=81.6, Expect=3e-19]} {Smed: dd_Smed_v6_6468_0_1, dd_Smed_v6_6468_0_1, [RH, Score=86.3, Expect=4e-21]} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1310_22856, RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085} {RNA1509_15512, RNA1509_35772, RNA1509_47016, RNA1509_47085, RNA815_10452} |
| 7. | MligTC455_23962 | 197 | 4.11 | Mlig455_059534 | Neo: Irradiation Age: Up-Down-Down |
0.95 | - | - | - | - | 0.950 | - | Mlig455_059534 {REF} {Length: 3430} {TRANSSPLICED} {RNA1509_35261} {RNA1310_9638.1} {RNA815_16721} | |
| 8. | MligTC455_25155 | 3025 | 63.02 | Mlig455_031061 | Neo: Neoblast Age: Down-Up-Up, logFC(26M/2M)=0.354 Region-enriched R5: 1.626/0.00001 |
CACYBP | 0.95 | - | - | - | - | 0.950 | - | Mlig455_031061 {REF} {Length: 989} {TRANSSPLICED} {Pfam: Siah interacting protein, N terminal [PF09032.13, score=48.9]; CS domain [PF04969.18, score=29.0]; SGS domain [PF05002.17, score=22.5]} {Human: ENSG00000116161, CACYBP, calcyclin binding protein, [RH, Score=128, Expect=4e-36]} {Mouse: ENSMUSG00000014226, Cacybp, calcyclin binding protein, [RH, Score=134, Expect=2e-38]} {Dmel: FBgn0029882, CG3226, [RH, Score=106, Expect=6e-28]} {Smed: dd_Smed_v6_377_0_1, dd_Smed_v6_377_0_1, [RH, Score=141, Expect=1e-41]} {RNA1509_6615} {RNA1310_34115} {RNA815_17093} |
| 9. | MligTC455_33867 | 340 | 7.08 | Mlig455_005075 | Neo: - Age: - |
MED13 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_005075 {REF} {Length: 6887} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=49.4]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=212, Expect=2e-54]; ENSG00000123066, MED13L, mediator complex subunit 13 like, [RH, Score=202, Expect=1e-51]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=6e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=9e-51]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=176, Expect=4e-44]} {RNA1509_5621} {RNA1310_887} {RNA815_2444} |
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